RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 PPP1R42Q7Z4L9 355 aa8.78□□□□□ -1
HDAC9-214ENST00000441542 WAPLQ7Z5K2 1190 aa8.78□□□□□ -1
HDAC9-214ENST00000441542 OSBPL3Q9H4L5 887 aa8.78□□□□□ -1
HDAC9-214ENST00000441542 ESF1Q9H501 851 aaKnown RBP8.78□□□□□ -1
HDAC9-214ENST00000441542 PUF60Q9UHX1 559 aaKnown RBP8.78□□□□□ -1
HDAC9-214ENST00000441542 HDAC5Q9UQL6 1122 aa8.78□□□□□ -1
HDAC9-214ENST00000441542 NPHP3Q7Z494 1330 aa8.78□□□□□ -1
HDAC9-214ENST00000441542 GNAI3P08754 354 aa8.77□□□□□ -1.01
HDAC9-214ENST00000441542 GNG11P61952 73 aa8.77□□□□□ -1.01
HDAC9-214ENST00000441542 STX1AQ16623 288 aa8.77□□□□□ -1.01
HDAC9-214ENST00000441542 AXDND1Q5T1B0 1012 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-214ENST00000441542 FSIP1Q8NA03 581 aa8.77□□□□□ -1.01
HDAC9-214ENST00000441542 CCDC102AQ96A19 550 aa8.77□□□□□ -1.01
HDAC9-214ENST00000441542 FAM227BQ96M60 508 aa8.77□□□□□ -1.01
HDAC9-214ENST00000441542 RBM8AQ9Y5S9 174 aaKnown RBP8.77□□□□□ -1.01
HDAC9-214ENST00000441542 FANCAO15360 1455 aa8.77□□□□□ -1.01
HDAC9-214ENST00000441542 CLTCL1P53675 1640 aa8.77□□□□□ -1.01
HDAC9-214ENST00000441542 ANXA1P04083 346 aa8.77□□□□□ -1.01
HDAC9-214ENST00000441542 IQCB1Q15051 598 aa8.77□□□□□ -1.01
HDAC9-214ENST00000441542 ICE2Q659A1 982 aa8.77□□□□□ -1.01
HDAC9-214ENST00000441542 CEP57L1Q8IYX8 460 aa8.77□□□□□ -1.01
HDAC9-214ENST00000441542 A0A1B0GVL5 298 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 NOP2P46087 812 aaKnown RBP8.76□□□□□ -1.01
HDAC9-214ENST00000441542 CCT4P50991 539 aaKnown RBP8.76□□□□□ -1.01
HDAC9-214ENST00000441542 SUGCTQ9HAC7 445 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 ADAM21Q9UKJ8 722 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 JRKLQ9Y4A0 524 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 ARHGEF5Q12774 1597 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 RAD21O60216 631 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 N4BP1O75113 896 aaKnown RBP8.76□□□□□ -1.01
HDAC9-214ENST00000441542 SF3A1Q15459 793 aaKnown RBP8.76□□□□□ -1.01
HDAC9-214ENST00000441542 RNF20Q5VTR2 975 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 ARMCX5Q6P1M9 558 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 BLOC1S2Q6QNY1 142 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 SRLQ86TD4 932 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 PACS2Q86VP3 889 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 RHPN1Q8TCX5 695 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 GOLPH3LQ9H4A5 285 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 PDE11AQ9HCR9 933 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 ARFGAP3Q9NP61 516 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 SPATA31D1Q6ZQQ2 1576 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 DUOX2Q9NRD8 1548 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 RIMS2Q9UQ26 1411 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 KDM4FA0A1W2PPD8 638 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 H3BQF6 201 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 IL13P35225 146 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 CEBPAP49715 358 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-214ENST00000441542 CCT2P78371 535 aaKnown RBP8.76□□□□□ -1.01
HDAC9-214ENST00000441542 ATP8B2P98198 1209 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 DHX8Q14562 1220 aaKnown RBP8.76□□□□□ -1.01
HDAC9-214ENST00000441542 RAB11FIP4Q86YS3 637 aa8.76□□□□□ -1.01
HDAC9-214ENST00000441542 NEMFO60524 1076 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 TBC1D8O95759 1140 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 FLIIQ13045 1269 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 SLFNL1Q499Z3 407 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 FAM212AQ96EL1 285 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 ZSCAN31Q96LW9 406 aaPredicted RBP8.75□□□□□ -1.01
HDAC9-214ENST00000441542 DEF6Q9H4E7 631 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 EFCC1Q9HA90 598 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 PA2G4Q9UQ80 394 aaKnown RBP8.75□□□□□ -1.01
HDAC9-214ENST00000441542 NDUFB9Q9Y6M9 179 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 NEO1Q92859 1461 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 NSD2O96028 1365 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 LRRC7Q96NW7 1537 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 SERPINC1P01008 464 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 PDCP20941 246 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 PPARDQ03181 441 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 DPCR1Q3MIW9 517 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 CFAP100Q494V2 611 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 CREB3L3Q68CJ9 461 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 OTUD7BQ6GQQ9 843 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 MRFAP1L1Q96HT8 127 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 GDAP1L1Q96MZ0 367 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 DESI2Q9BSY9 194 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 CCDC8Q9H0W5 538 aaPredicted RBP8.75□□□□□ -1.01
HDAC9-214ENST00000441542 SH2B1Q9NRF2 756 aaPredicted RBP8.75□□□□□ -1.01
HDAC9-214ENST00000441542 FAM53CQ9NYF3 392 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 TFRCP02786 760 aaKnown RBP8.75□□□□□ -1.01
HDAC9-214ENST00000441542 RHOXF2BP0C7M4 288 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 ATP1A3P13637 1013 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 ETF1P62495 437 aaKnown RBP8.75□□□□□ -1.01
HDAC9-214ENST00000441542 NOM1Q5C9Z4 860 aaKnown RBP8.75□□□□□ -1.01
HDAC9-214ENST00000441542 MICALL1Q8N3F8 863 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 SEC62Q99442 399 aaKnown RBP8.75□□□□□ -1.01
HDAC9-214ENST00000441542 RHOXF2Q9BQY4 288 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 BOLA2Q9H3K6 86 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 ANO10Q9NW15 660 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 SLC52A1Q9NWF4 448 aa8.75□□□□□ -1.01
HDAC9-214ENST00000441542 SOS1Q07889 1333 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-214ENST00000441542 IQGAP3Q86VI3 1631 aa8.74□□□□□ -1.01
HDAC9-214ENST00000441542 A0A1B0GUL7 405 aa8.74□□□□□ -1.01
HDAC9-214ENST00000441542 VPS53Q5VIR6 699 aa8.74□□□□□ -1.01
HDAC9-214ENST00000441542 CC2D1AQ6P1N0 951 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-214ENST00000441542 DHX40Q8IX18 779 aaKnown RBP8.74□□□□□ -1.01
HDAC9-214ENST00000441542 KCTD17Q8N5Z5 321 aa8.74□□□□□ -1.01
HDAC9-214ENST00000441542 SIRT1Q96EB6 747 aa8.74□□□□□ -1.01
HDAC9-214ENST00000441542 EDC3Q96F86 508 aaKnown RBP8.74□□□□□ -1.01
HDAC9-214ENST00000441542 HINFPQ9BQA5 517 aa8.74□□□□□ -1.01
HDAC9-214ENST00000441542 PARD6BQ9BYG5 372 aa8.74□□□□□ -1.01
HDAC9-214ENST00000441542 FAN1Q9Y2M0 1017 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms