RNA–Protein interactions for RNA: ENST00000441214.1

LINC01271-201, Transcript of long intergenic non-protein coding RNA 1271, humanhuman

TSL 1 (best) BASIC

Gene LINC01271, Length 2,250 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01271-201ENST00000441214 QTRT2Q9H974 415 aaKnown RBP16.48■□□□□ 0.23
LINC01271-201ENST00000441214 TAOK2Q9UL54 1235 aa16.48■□□□□ 0.23
LINC01271-201ENST00000441214 TOGARAM1Q9Y4F4 1720 aa16.48■□□□□ 0.23
LINC01271-201ENST00000441214 RLBP1P12271 317 aa16.48■□□□□ 0.23
LINC01271-201ENST00000441214 PIP4K2AP48426 406 aaPredicted RBP16.48■□□□□ 0.23
LINC01271-201ENST00000441214 TEX35Q5T0J7 233 aa16.48■□□□□ 0.23
LINC01271-201ENST00000441214 SIPA1L3O60292 1781 aaPredicted RBP16.47■□□□□ 0.23
LINC01271-201ENST00000441214 PPP1R12AO14974 1030 aaPredicted RBP16.47■□□□□ 0.23
LINC01271-201ENST00000441214 SLFNL1Q499Z3 407 aa16.47■□□□□ 0.23
LINC01271-201ENST00000441214 ZNF790Q6PG37 636 aa16.47■□□□□ 0.23
LINC01271-201ENST00000441214 SGSM3Q96HU1 749 aa16.47■□□□□ 0.23
LINC01271-201ENST00000441214 GJD4Q96KN9 370 aaPredicted RBP16.47■□□□□ 0.23
LINC01271-201ENST00000441214 ZNF446Q9NWS9 450 aa16.47■□□□□ 0.23
LINC01271-201ENST00000441214 CCDC189A1A4V9 331 aa16.47■□□□□ 0.23
LINC01271-201ENST00000441214 C10orf67Q8IYJ2 551 aa16.47■□□□□ 0.23
LINC01271-201ENST00000441214 ZNF496Q96IT1 587 aaPredicted RBP16.47■□□□□ 0.23
LINC01271-201ENST00000441214 TSPY26PQ9H489 355 aa16.47■□□□□ 0.23
LINC01271-201ENST00000441214 THRAP3Q9Y2W1 955 aaKnown RBP16.47■□□□□ 0.23
LINC01271-201ENST00000441214 TNS2Q63HR2 1409 aa16.46■□□□□ 0.23
LINC01271-201ENST00000441214 KDM3BQ7LBC6 1761 aa16.46■□□□□ 0.23
LINC01271-201ENST00000441214 KIF3CO14782 793 aa16.46■□□□□ 0.23
LINC01271-201ENST00000441214 ZKSCAN8Q15776 578 aaPredicted RBP16.46■□□□□ 0.23
LINC01271-201ENST00000441214 SYT10Q6XYQ8 523 aa16.46■□□□□ 0.23
LINC01271-201ENST00000441214 ATG3Q9NT62 314 aa16.46■□□□□ 0.23
LINC01271-201ENST00000441214 COG6Q9Y2V7 657 aa16.46■□□□□ 0.23
LINC01271-201ENST00000441214 PAXBP1Q9Y5B6 917 aa16.46■□□□□ 0.23
LINC01271-201ENST00000441214 MBD3O95983 291 aa16.45■□□□□ 0.22
LINC01271-201ENST00000441214 SLC4A2P04920 1241 aa16.45■□□□□ 0.22
LINC01271-201ENST00000441214 ASAP1Q9ULH1 1129 aa16.45■□□□□ 0.22
LINC01271-201ENST00000441214 ADAMTS7Q9UKP4 1686 aa16.45■□□□□ 0.22
LINC01271-201ENST00000441214 GLI3P10071 1580 aa16.45■□□□□ 0.22
LINC01271-201ENST00000441214 BARGINQ6ZT62 677 aa16.45■□□□□ 0.22
LINC01271-201ENST00000441214 G2E3Q7L622 706 aa16.45■□□□□ 0.22
LINC01271-201ENST00000441214 TTC5Q8N0Z6 440 aa16.45■□□□□ 0.22
LINC01271-201ENST00000441214 MRPL50Q8N5N7 158 aaKnown RBP16.45■□□□□ 0.22
LINC01271-201ENST00000441214 PIGBQ92521 554 aa16.45■□□□□ 0.22
LINC01271-201ENST00000441214 TMOD3Q9NYL9 352 aa16.45■□□□□ 0.22
LINC01271-201ENST00000441214 KCNQ2O43526 872 aa16.44■□□□□ 0.22
LINC01271-201ENST00000441214 HDGFL1Q5TGJ6 251 aa16.44■□□□□ 0.22
LINC01271-201ENST00000441214 PTF1AQ7RTS3 328 aa16.44■□□□□ 0.22
LINC01271-201ENST00000441214 SUGP1Q8IWZ8 645 aaKnown RBP16.44■□□□□ 0.22
LINC01271-201ENST00000441214 TTC12Q9H892 705 aaPredicted RBP16.44■□□□□ 0.22
LINC01271-201ENST00000441214 SYCE3A1L190 88 aa16.44■□□□□ 0.22
LINC01271-201ENST00000441214 TRIM27P14373 513 aa16.44■□□□□ 0.22
LINC01271-201ENST00000441214 GYS2P54840 703 aa16.44■□□□□ 0.22
LINC01271-201ENST00000441214 BMS1Q14692 1282 aaKnown RBP16.44■□□□□ 0.22
LINC01271-201ENST00000441214 NKX1-1Q15270 411 aaPredicted RBP16.44■□□□□ 0.22
LINC01271-201ENST00000441214 TOMM22Q9NS69 142 aa16.44■□□□□ 0.22
LINC01271-201ENST00000441214 TRPC5Q9UL62 973 aaPredicted RBP16.44■□□□□ 0.22
LINC01271-201ENST00000441214 TTC31Q49AM3 519 aaPredicted RBP16.43■□□□□ 0.22
LINC01271-201ENST00000441214 RWDD1Q9H446 243 aaPredicted RBP16.43■□□□□ 0.22
LINC01271-201ENST00000441214 CYP2E1P05181 493 aaPredicted RBP16.43■□□□□ 0.22
LINC01271-201ENST00000441214 CT47B1P0C2W7 299 aaPredicted RBP16.43■□□□□ 0.22
LINC01271-201ENST00000441214 ATP6V1AP38606 617 aa16.43■□□□□ 0.22
LINC01271-201ENST00000441214 LRCH2Q5VUJ6 765 aa16.43■□□□□ 0.22
LINC01271-201ENST00000441214 GPT2Q8TD30 523 aa16.43■□□□□ 0.22
LINC01271-201ENST00000441214 DRC1Q96MC2 740 aa16.43■□□□□ 0.22
LINC01271-201ENST00000441214 ITGB4P16144 1822 aa16.42■□□□□ 0.22
LINC01271-201ENST00000441214 OS9Q13438 667 aaPredicted RBP16.42■□□□□ 0.22
LINC01271-201ENST00000441214 ZNF428Q96B54 188 aa16.42■□□□□ 0.22
LINC01271-201ENST00000441214 TMEM63CQ9P1W3 806 aa16.42■□□□□ 0.22
LINC01271-201ENST00000441214 CHPF2Q9P2E5 772 aa16.42■□□□□ 0.22
LINC01271-201ENST00000441214 DOT1LQ8TEK3 1739 aa16.42■□□□□ 0.22
LINC01271-201ENST00000441214 GIGYF1O75420 1035 aaPredicted RBP16.42■□□□□ 0.22
LINC01271-201ENST00000441214 RABEP1Q15276 862 aa16.42■□□□□ 0.22
LINC01271-201ENST00000441214 ZKSCAN2Q63HK3 967 aa16.42■□□□□ 0.22
LINC01271-201ENST00000441214 NBPF5PQ86XG9 351 aaPredicted RBP16.42■□□□□ 0.22
LINC01271-201ENST00000441214 C17orf53Q8N3J3 647 aaPredicted RBP16.42■□□□□ 0.22
LINC01271-201ENST00000441214 PHAXQ9H814 394 aaKnown RBP16.42■□□□□ 0.22
LINC01271-201ENST00000441214 ERVV-2B6SEH9 535 aa16.41■□□□□ 0.22
LINC01271-201ENST00000441214 PROSER3Q2NL68 480 aa16.41■□□□□ 0.22
LINC01271-201ENST00000441214 ALDH1L2Q3SY69 923 aa16.41■□□□□ 0.22
LINC01271-201ENST00000441214 SEPT12Q8IYM1 358 aa16.41■□□□□ 0.22
LINC01271-201ENST00000441214 SYAP1Q96A49 352 aaPredicted RBP16.41■□□□□ 0.22
LINC01271-201ENST00000441214 RBM42Q9BTD8 480 aaKnown RBP16.41■□□□□ 0.22
LINC01271-201ENST00000441214 CDCA7Q9BWT1 371 aaPredicted RBP16.41■□□□□ 0.22
LINC01271-201ENST00000441214 USP16Q9Y5T5 823 aa16.41■□□□□ 0.22
LINC01271-201ENST00000441214 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.41■□□□□ 0.22
LINC01271-201ENST00000441214 CCDC196A0A1B0GTZ2 297 aa16.4■□□□□ 0.22
LINC01271-201ENST00000441214 GPS2Q13227 327 aa16.4■□□□□ 0.22
LINC01271-201ENST00000441214 RNF20Q5VTR2 975 aa16.4■□□□□ 0.22
LINC01271-201ENST00000441214 SRLQ86TD4 932 aa16.4■□□□□ 0.22
LINC01271-201ENST00000441214 MRC1P22897 1456 aa16.4■□□□□ 0.22
LINC01271-201ENST00000441214 C5P01031 1676 aa16.4■□□□□ 0.22
LINC01271-201ENST00000441214 F6X3S4 739 aa16.4■□□□□ 0.22
LINC01271-201ENST00000441214 TRIM66O15016 1216 aa16.4■□□□□ 0.22
LINC01271-201ENST00000441214 MYL6BP14649 208 aa16.4■□□□□ 0.22
LINC01271-201ENST00000441214 RBM6P78332 1123 aaKnown RBP16.4■□□□□ 0.22
LINC01271-201ENST00000441214 KMT5BQ4FZB7 885 aa16.4■□□□□ 0.22
LINC01271-201ENST00000441214 RNF214Q8ND24 703 aa16.4■□□□□ 0.22
LINC01271-201ENST00000441214 CEP89Q96ST8 783 aa16.4■□□□□ 0.22
LINC01271-201ENST00000441214 ATRNO75882 1429 aa16.4■□□□□ 0.22
LINC01271-201ENST00000441214 MAGEA9P43362 315 aa16.39■□□□□ 0.21
LINC01271-201ENST00000441214 TSGA10IPQ3SY00 556 aa16.39■□□□□ 0.21
LINC01271-201ENST00000441214 ATF7IPQ6VMQ6 1270 aa16.39■□□□□ 0.21
LINC01271-201ENST00000441214 KRBA2Q6ZNG9 492 aa16.39■□□□□ 0.21
LINC01271-201ENST00000441214 STK31Q9BXU1 1019 aa16.39■□□□□ 0.21
LINC01271-201ENST00000441214 RBM27Q9P2N5 1060 aaKnown RBP16.39■□□□□ 0.21
LINC01271-201ENST00000441214 KCNQ4P56696 695 aa16.39■□□□□ 0.21
LINC01271-201ENST00000441214 TPM4P67936 248 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 801.9 ms