RNA–Protein interactions for RNA: ENST00000441012.6

NR1H3-211, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1H3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-211ENST00000441012 DDX49Q9Y6V7 483 aaKnown RBP18.27■□□□□ 0.52
NR1H3-211ENST00000441012 ARFGEF2Q9Y6D5 1785 aa18.27■□□□□ 0.51
NR1H3-211ENST00000441012 MAP4K4O95819 1239 aaPredicted RBP18.27■□□□□ 0.51
NR1H3-211ENST00000441012 CASP7P55210 303 aa18.27■□□□□ 0.51
NR1H3-211ENST00000441012 ZNF445P59923 1031 aa18.27■□□□□ 0.51
NR1H3-211ENST00000441012 MCTP1Q6DN14 999 aa18.26■□□□□ 0.51
NR1H3-211ENST00000441012 CWC27Q6UX04 472 aaKnown RBP18.26■□□□□ 0.51
NR1H3-211ENST00000441012 QSER1Q2KHR3 1735 aa18.26■□□□□ 0.51
NR1H3-211ENST00000441012 H7C1W4 665 aa18.25■□□□□ 0.51
NR1H3-211ENST00000441012 PDIA4P13667 645 aaKnown RBP18.25■□□□□ 0.51
NR1H3-211ENST00000441012 STK32BQ9NY57 414 aa18.25■□□□□ 0.51
NR1H3-211ENST00000441012 KCPQ6ZWJ8 1503 aa18.24■□□□□ 0.51
NR1H3-211ENST00000441012 ATP5JP18859 108 aa18.24■□□□□ 0.51
NR1H3-211ENST00000441012 PTPN12Q05209 780 aaKnown RBP18.24■□□□□ 0.51
NR1H3-211ENST00000441012 PKP1Q13835 747 aa18.24■□□□□ 0.51
NR1H3-211ENST00000441012 EPHA10Q5JZY3 1008 aa18.24■□□□□ 0.51
NR1H3-211ENST00000441012 VPS53Q5VIR6 699 aa18.24■□□□□ 0.51
NR1H3-211ENST00000441012 ZSCAN31Q96LW9 406 aaPredicted RBP18.24■□□□□ 0.51
NR1H3-211ENST00000441012 LIMCH1Q9UPQ0 1083 aa18.24■□□□□ 0.51
NR1H3-211ENST00000441012 CCDC171Q6TFL3 1326 aa18.24■□□□□ 0.51
NR1H3-211ENST00000441012 ZBTB7AO95365 584 aa18.23■□□□□ 0.51
NR1H3-211ENST00000441012 NECTIN1Q15223 517 aa18.23■□□□□ 0.51
NR1H3-211ENST00000441012 SLC15A2Q16348 729 aa18.23■□□□□ 0.51
NR1H3-211ENST00000441012 MAP4K1Q92918 833 aa18.23■□□□□ 0.51
NR1H3-211ENST00000441012 UPF3BQ9BZI7 483 aaKnown RBP18.23■□□□□ 0.51
NR1H3-211ENST00000441012 ALDH8A1Q9H2A2 487 aaPredicted RBP18.23■□□□□ 0.51
NR1H3-211ENST00000441012 ZSWIM6Q9HCJ5 1215 aa18.23■□□□□ 0.51
NR1H3-211ENST00000441012 GPR108Q9NPR9 543 aa18.23■□□□□ 0.51
NR1H3-211ENST00000441012 WDR33Q9C0J8 1336 aaKnown RBP18.23■□□□□ 0.51
NR1H3-211ENST00000441012 LY75O60449 1722 aa18.23■□□□□ 0.51
NR1H3-211ENST00000441012 MBD3O95983 291 aa18.23■□□□□ 0.51
NR1H3-211ENST00000441012 SH2B1Q9NRF2 756 aaPredicted RBP18.23■□□□□ 0.51
NR1H3-211ENST00000441012 ATG3Q9NT62 314 aa18.23■□□□□ 0.51
NR1H3-211ENST00000441012 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.23■□□□□ 0.51
NR1H3-211ENST00000441012 ZKSCAN1P17029 563 aaPredicted RBP18.22■□□□□ 0.51
NR1H3-211ENST00000441012 TSGA10IPQ3SY00 556 aa18.22■□□□□ 0.51
NR1H3-211ENST00000441012 RASEFQ8IZ41 740 aa18.22■□□□□ 0.51
NR1H3-211ENST00000441012 KLHL34Q8N239 644 aa18.22■□□□□ 0.51
NR1H3-211ENST00000441012 A0A087WZG4 1122 aa18.21■□□□□ 0.51
NR1H3-211ENST00000441012 NBPF26B4DH59 902 aa18.21■□□□□ 0.51
NR1H3-211ENST00000441012 NBPF10Q6P3W6 841 aaKnown RBP18.21■□□□□ 0.51
NR1H3-211ENST00000441012 NBPF15Q8N660 670 aa18.21■□□□□ 0.51
NR1H3-211ENST00000441012 CCDC191Q8NCU4 936 aa18.21■□□□□ 0.51
NR1H3-211ENST00000441012 MED23Q9ULK4 1368 aa18.21■□□□□ 0.51
NR1H3-211ENST00000441012 AFDNP55196 1824 aaKnown RBP18.21■□□□□ 0.51
NR1H3-211ENST00000441012 PSMA5P28066 241 aa18.2■□□□□ 0.5
NR1H3-211ENST00000441012 TNNI3KQ59H18 835 aa18.2■□□□□ 0.5
NR1H3-211ENST00000441012 TEX13AQ9BXU3 409 aaPredicted RBP18.2■□□□□ 0.5
NR1H3-211ENST00000441012 CCDC8Q9H0W5 538 aaPredicted RBP18.2■□□□□ 0.5
NR1H3-211ENST00000441012 HMG20BQ9P0W2 317 aa18.2■□□□□ 0.5
NR1H3-211ENST00000441012 FPGT-TNNI3KV9GXZ4 949 aa18.2■□□□□ 0.5
NR1H3-211ENST00000441012 PTGER2P43116 358 aa18.2■□□□□ 0.5
NR1H3-211ENST00000441012 AK2P54819 239 aa18.2■□□□□ 0.5
NR1H3-211ENST00000441012 PTH1RQ03431 593 aa18.2■□□□□ 0.5
NR1H3-211ENST00000441012 RNF20Q5VTR2 975 aa18.2■□□□□ 0.5
NR1H3-211ENST00000441012 UBE3BQ7Z3V4 1068 aa18.2■□□□□ 0.5
NR1H3-211ENST00000441012 GAS2L3Q86XJ1 694 aa18.2■□□□□ 0.5
NR1H3-211ENST00000441012 VSIG10Q8N0Z9 540 aa18.2■□□□□ 0.5
NR1H3-211ENST00000441012 CWC25Q9NXE8 425 aaPredicted RBP18.2■□□□□ 0.5
NR1H3-211ENST00000441012 ATF5Q9Y2D1 282 aaPredicted RBP18.2■□□□□ 0.5
NR1H3-211ENST00000441012 CYP46A1Q9Y6A2 500 aa18.2■□□□□ 0.5
NR1H3-211ENST00000441012 RPAP1Q9BWH6 1393 aaPredicted RBP18.19■□□□□ 0.5
NR1H3-211ENST00000441012 FOXO4P98177 505 aa18.19■□□□□ 0.5
NR1H3-211ENST00000441012 TRIM28Q13263 835 aaKnown RBP18.19■□□□□ 0.5
NR1H3-211ENST00000441012 NMIQ13287 307 aaPredicted RBP18.19■□□□□ 0.5
NR1H3-211ENST00000441012 RUFY3Q7L099 469 aa18.19■□□□□ 0.5
NR1H3-211ENST00000441012 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.19■□□□□ 0.5
NR1H3-211ENST00000441012 COL24A1Q17RW2 1714 aa18.18■□□□□ 0.5
NR1H3-211ENST00000441012 PRPF40AO75400 957 aaKnown RBP18.18■□□□□ 0.5
NR1H3-211ENST00000441012 TMEM87AQ8NBN3 555 aa18.18■□□□□ 0.5
NR1H3-211ENST00000441012 FBXO3Q9UK99 471 aa18.18■□□□□ 0.5
NR1H3-211ENST00000441012 RBM8AQ9Y5S9 174 aaKnown RBP18.18■□□□□ 0.5
NR1H3-211ENST00000441012 CHD4Q14839 1912 aa18.18■□□□□ 0.5
NR1H3-211ENST00000441012 ANKRD1Q15327 319 aa18.17■□□□□ 0.5
NR1H3-211ENST00000441012 USPL1Q5W0Q7 1092 aa18.17■□□□□ 0.5
NR1H3-211ENST00000441012 CREB3L3Q68CJ9 461 aa18.17■□□□□ 0.5
NR1H3-211ENST00000441012 DDX54Q8TDD1 881 aaKnown RBP18.17■□□□□ 0.5
NR1H3-211ENST00000441012 FSD1Q9BTV5 496 aa18.17■□□□□ 0.5
NR1H3-211ENST00000441012 SIL1Q9H173 461 aa18.17■□□□□ 0.5
NR1H3-211ENST00000441012 BOLA2Q9H3K6 86 aa18.17■□□□□ 0.5
NR1H3-211ENST00000441012 PDRG1Q9NUG6 133 aa18.17■□□□□ 0.5
NR1H3-211ENST00000441012 TLR7Q9NYK1 1049 aaKnown RBP18.17■□□□□ 0.5
NR1H3-211ENST00000441012 CIAO1O76071 339 aa18.16■□□□□ 0.5
NR1H3-211ENST00000441012 CASTP20810 708 aaKnown RBP18.16■□□□□ 0.5
NR1H3-211ENST00000441012 YY1P25490 414 aa18.16■□□□□ 0.5
NR1H3-211ENST00000441012 HAUS7Q99871 368 aa18.16■□□□□ 0.5
NR1H3-211ENST00000441012 DBNLQ9UJU6 430 aaKnown RBP18.16■□□□□ 0.5
NR1H3-211ENST00000441012 UTRNP46939 3433 aa18.16■□□□□ 0.5
NR1H3-211ENST00000441012 IL15P40933 162 aaPredicted RBP18.16■□□□□ 0.5
NR1H3-211ENST00000441012 TFCP2Q12800 502 aa18.16■□□□□ 0.5
NR1H3-211ENST00000441012 KRT32Q14532 448 aa18.16■□□□□ 0.5
NR1H3-211ENST00000441012 ZNF827Q17R98 1081 aa18.16■□□□□ 0.5
NR1H3-211ENST00000441012 ZSCAN23Q3MJ62 389 aa18.16■□□□□ 0.5
NR1H3-211ENST00000441012 PRPF40BQ6NWY9 871 aaKnown RBP18.16■□□□□ 0.5
NR1H3-211ENST00000441012 JAKMIP1Q96N16 626 aaKnown RBP18.16■□□□□ 0.5
NR1H3-211ENST00000441012 MTFR1LQ9H019 292 aa18.16■□□□□ 0.5
NR1H3-211ENST00000441012 LRRC4BQ9NT99 713 aa18.16■□□□□ 0.5
NR1H3-211ENST00000441012 LMBR1LQ6UX01 489 aa18.15■□□□□ 0.5
NR1H3-211ENST00000441012 GPT2Q8TD30 523 aa18.15■□□□□ 0.5
NR1H3-211ENST00000441012 FAM227BQ96M60 508 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms