RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 TREML1Q86YW5 311 aa5.95□□□□□ -1.46
HMGB3P11-201ENST00000440127 STK32AQ8WU08 396 aa5.95□□□□□ -1.46
HMGB3P11-201ENST00000440127 PIK3R5Q8WYR1 880 aa5.95□□□□□ -1.46
HMGB3P11-201ENST00000440127 PRIMPOLQ96LW4 560 aa5.95□□□□□ -1.46
HMGB3P11-201ENST00000440127 BCS1LQ9Y276 419 aa5.95□□□□□ -1.46
HMGB3P11-201ENST00000440127 EGFRP00533 1210 aa5.94□□□□□ -1.46
HMGB3P11-201ENST00000440127 RPLP1P05386 114 aaKnown RBP5.94□□□□□ -1.46
HMGB3P11-201ENST00000440127 PSAPP07602 524 aa5.94□□□□□ -1.46
HMGB3P11-201ENST00000440127 NRLP54845 237 aa5.94□□□□□ -1.46
HMGB3P11-201ENST00000440127 GPLD1P80108 840 aa5.94□□□□□ -1.46
HMGB3P11-201ENST00000440127 OCLNQ16625 522 aa5.94□□□□□ -1.46
HMGB3P11-201ENST00000440127 DHX32Q7L7V1 743 aaKnown RBP5.94□□□□□ -1.46
HMGB3P11-201ENST00000440127 FAM35AQ86V20 835 aa5.94□□□□□ -1.46
HMGB3P11-201ENST00000440127 RTCBQ9Y3I0 505 aaKnown RBP5.94□□□□□ -1.46
HMGB3P11-201ENST00000440127 XYLBO75191 536 aa5.93□□□□□ -1.46
HMGB3P11-201ENST00000440127 ELNP15502 786 aa5.93□□□□□ -1.46
HMGB3P11-201ENST00000440127 PCSK2P16519 638 aa5.93□□□□□ -1.46
HMGB3P11-201ENST00000440127 ATP2B4P23634 1241 aa5.93□□□□□ -1.46
HMGB3P11-201ENST00000440127 GATA4P43694 442 aa5.93□□□□□ -1.46
HMGB3P11-201ENST00000440127 BAG6P46379 1132 aa5.93□□□□□ -1.46
HMGB3P11-201ENST00000440127 NRG1Q02297 640 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P11-201ENST00000440127 PLAURQ03405 335 aa5.93□□□□□ -1.46
HMGB3P11-201ENST00000440127 COX20Q5RI15 118 aa5.93□□□□□ -1.46
HMGB3P11-201ENST00000440127 TMEM164Q5U3C3 297 aa5.93□□□□□ -1.46
HMGB3P11-201ENST00000440127 PSAPL1Q6NUJ1 521 aa5.93□□□□□ -1.46
HMGB3P11-201ENST00000440127 ELMSAN1Q6PJG2 1045 aa5.93□□□□□ -1.46
HMGB3P11-201ENST00000440127 RGL4Q8IZJ4 473 aa5.93□□□□□ -1.46
HMGB3P11-201ENST00000440127 CACTIN-AS1Q8N1I8 211 aa5.93□□□□□ -1.46
HMGB3P11-201ENST00000440127 DTWD1Q8N5C7 304 aa5.93□□□□□ -1.46
HMGB3P11-201ENST00000440127 TRPM4Q8TD43 1214 aa5.93□□□□□ -1.46
HMGB3P11-201ENST00000440127 STARD13Q9Y3M8 1113 aa5.93□□□□□ -1.46
HMGB3P11-201ENST00000440127 C1QTNF9BB2RNN3 333 aa5.92□□□□□ -1.46
HMGB3P11-201ENST00000440127 C9orf172C9J069 976 aa5.92□□□□□ -1.46
HMGB3P11-201ENST00000440127 GHRHP01286 108 aa5.92□□□□□ -1.46
HMGB3P11-201ENST00000440127 FURINP09958 794 aa5.92□□□□□ -1.46
HMGB3P11-201ENST00000440127 NID1P14543 1247 aa5.92□□□□□ -1.46
HMGB3P11-201ENST00000440127 SOX18P35713 384 aa5.92□□□□□ -1.46
HMGB3P11-201ENST00000440127 B4GALNT3Q6L9W6 998 aa5.92□□□□□ -1.46
HMGB3P11-201ENST00000440127 C20orf204Q6ZNR8 217 aa5.92□□□□□ -1.46
HMGB3P11-201ENST00000440127 KRT25Q7Z3Z0 450 aa5.92□□□□□ -1.46
HMGB3P11-201ENST00000440127 CD163Q86VB7 1156 aa5.92□□□□□ -1.46
HMGB3P11-201ENST00000440127 CMTR1Q8N1G2 835 aaKnown RBP5.92□□□□□ -1.46
HMGB3P11-201ENST00000440127 TTC16Q8NEE8 873 aa5.92□□□□□ -1.46
HMGB3P11-201ENST00000440127 ZCCHC6Q5VYS8 1495 aaKnown RBP5.91□□□□□ -1.46
HMGB3P11-201ENST00000440127 EIF2AK2P19525 551 aaKnown RBP5.91□□□□□ -1.46
HMGB3P11-201ENST00000440127 SRPK2P78362 688 aaKnown RBP5.91□□□□□ -1.46
HMGB3P11-201ENST00000440127 FAM69CQ0P6D2 419 aa5.91□□□□□ -1.46
HMGB3P11-201ENST00000440127 TTC9Q92623 222 aa5.91□□□□□ -1.46
HMGB3P11-201ENST00000440127 MKNK1Q9BUB5 465 aa5.91□□□□□ -1.46
HMGB3P11-201ENST00000440127 SRA1Q9HD15 236 aaKnown RBP5.91□□□□□ -1.46
HMGB3P11-201ENST00000440127 TLR7Q9NYK1 1049 aaKnown RBP5.91□□□□□ -1.46
HMGB3P11-201ENST00000440127 STIM2Q9P246 746 aa5.91□□□□□ -1.46
HMGB3P11-201ENST00000440127 LRFN2Q9ULH4 789 aa5.91□□□□□ -1.46
HMGB3P11-201ENST00000440127 FAM177BA6PVY3 158 aa5.9□□□□□ -1.46
HMGB3P11-201ENST00000440127 SUPT5HO00267 1087 aaKnown RBP5.9□□□□□ -1.46
HMGB3P11-201ENST00000440127 SASH3O75995 380 aa5.9□□□□□ -1.46
HMGB3P11-201ENST00000440127 HOXD8P13378 290 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P11-201ENST00000440127 CPB1P15086 417 aa5.9□□□□□ -1.46
HMGB3P11-201ENST00000440127 NLRP13Q86W25 1043 aa5.9□□□□□ -1.46
HMGB3P11-201ENST00000440127 WFDC8Q8IUA0 241 aa5.9□□□□□ -1.46
HMGB3P11-201ENST00000440127 Q8N3U1 123 aa5.9□□□□□ -1.46
HMGB3P11-201ENST00000440127 NUDT8Q8WV74 236 aa5.9□□□□□ -1.46
HMGB3P11-201ENST00000440127 SPACA7Q96KW9 195 aa5.9□□□□□ -1.46
HMGB3P11-201ENST00000440127 A0A0A0MRY4 1105 aa5.89□□□□□ -1.47
HMGB3P11-201ENST00000440127 UBAP1LF5GYI3 381 aa5.89□□□□□ -1.47
HMGB3P11-201ENST00000440127 CHRNA4P43681 627 aa5.89□□□□□ -1.47
HMGB3P11-201ENST00000440127 AFF1P51825 1210 aaKnown RBP5.89□□□□□ -1.47
HMGB3P11-201ENST00000440127 MAP4K3Q8IVH8 894 aa5.89□□□□□ -1.47
HMGB3P11-201ENST00000440127 CCDC82Q8N4S0 544 aa5.89□□□□□ -1.47
HMGB3P11-201ENST00000440127 MUC3BQ9H195 1237 aa5.89□□□□□ -1.47
HMGB3P11-201ENST00000440127 ARID3CA6NKF2 412 aa5.88□□□□□ -1.47
HMGB3P11-201ENST00000440127 OPLAHO14841 1288 aa5.88□□□□□ -1.47
HMGB3P11-201ENST00000440127 TARSP26639 723 aaKnown RBP5.88□□□□□ -1.47
HMGB3P11-201ENST00000440127 ZAP70P43403 619 aa5.88□□□□□ -1.47
HMGB3P11-201ENST00000440127 TTC39BQ5VTQ0 682 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P11-201ENST00000440127 MSL1Q68DK7 614 aa5.88□□□□□ -1.47
HMGB3P11-201ENST00000440127 ALKBH2Q6NS38 261 aa5.88□□□□□ -1.47
HMGB3P11-201ENST00000440127 NAGPAQ9UK23 515 aa5.88□□□□□ -1.47
HMGB3P11-201ENST00000440127 PDE4CQ08493 712 aa5.87□□□□□ -1.47
HMGB3P11-201ENST00000440127 HYAL2Q12891 473 aa5.87□□□□□ -1.47
HMGB3P11-201ENST00000440127 PERM1Q5SV97 790 aa5.87□□□□□ -1.47
HMGB3P11-201ENST00000440127 C8orf86Q6ZUL3 223 aa5.87□□□□□ -1.47
HMGB3P11-201ENST00000440127 ETFBKMTQ8IXQ9 262 aa5.87□□□□□ -1.47
HMGB3P11-201ENST00000440127 FMR1NBQ8N0W7 255 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P11-201ENST00000440127 HELQQ8TDG4 1101 aa5.87□□□□□ -1.47
HMGB3P11-201ENST00000440127 LPIN3Q9BQK8 851 aa5.87□□□□□ -1.47
HMGB3P11-201ENST00000440127 SMG9Q9H0W8 520 aaKnown RBP5.87□□□□□ -1.47
HMGB3P11-201ENST00000440127 ZFATQ9P243 1243 aa5.87□□□□□ -1.47
HMGB3P11-201ENST00000440127 USP21Q9UK80 565 aa5.87□□□□□ -1.47
HMGB3P11-201ENST00000440127 SHROOM4Q9ULL8 1493 aa5.87□□□□□ -1.47
HMGB3P11-201ENST00000440127 LOC102724428A0A0B4J2F2 783 aa5.86□□□□□ -1.47
HMGB3P11-201ENST00000440127 GRNP28799 593 aaKnown RBP5.86□□□□□ -1.47
HMGB3P11-201ENST00000440127 SIK1P57059 783 aa5.86□□□□□ -1.47
HMGB3P11-201ENST00000440127 COL9A3Q14050 684 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P11-201ENST00000440127 NAA30Q147X3 362 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P11-201ENST00000440127 PDE12Q6L8Q7 609 aaKnown RBP5.86□□□□□ -1.47
HMGB3P11-201ENST00000440127 PLD4Q96BZ4 506 aa5.86□□□□□ -1.47
HMGB3P11-201ENST00000440127 LENG1Q96BZ8 264 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P11-201ENST00000440127 SAP130Q9H0E3 1048 aa5.86□□□□□ -1.47
HMGB3P11-201ENST00000440127 KCNMB2Q9Y691 235 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms