RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 SLX4Q8IY92 1834 aa18.21■□□□□ 0.51
TNFRSF1A-204ENST00000440083 ARFGEF1Q9Y6D6 1849 aa18.21■□□□□ 0.51
TNFRSF1A-204ENST00000440083 NPR1P16066 1061 aa18.21■□□□□ 0.51
TNFRSF1A-204ENST00000440083 GCKRQ14397 625 aa18.21■□□□□ 0.51
TNFRSF1A-204ENST00000440083 STYK1Q6J9G0 422 aa18.21■□□□□ 0.51
TNFRSF1A-204ENST00000440083 TTLL6Q8N841 843 aa18.21■□□□□ 0.51
TNFRSF1A-204ENST00000440083 MASTLQ96GX5 879 aa18.21■□□□□ 0.51
TNFRSF1A-204ENST00000440083 PCDHB15Q9Y5E8 787 aa18.21■□□□□ 0.51
TNFRSF1A-204ENST00000440083 COL4A1P02462 1669 aa18.2■□□□□ 0.5
TNFRSF1A-204ENST00000440083 IGHDP01880 384 aa18.2■□□□□ 0.5
TNFRSF1A-204ENST00000440083 PRPF40BQ6NWY9 871 aaKnown RBP18.2■□□□□ 0.5
TNFRSF1A-204ENST00000440083 UBE3BQ7Z3V4 1068 aa18.2■□□□□ 0.5
TNFRSF1A-204ENST00000440083 NLRP3Q96P20 1036 aa18.2■□□□□ 0.5
TNFRSF1A-204ENST00000440083 PDZRN3Q9UPQ7 1066 aa18.2■□□□□ 0.5
TNFRSF1A-204ENST00000440083 DCAF8L1A6NGE4 600 aa18.19■□□□□ 0.5
TNFRSF1A-204ENST00000440083 RPGRQ92834 1020 aaKnown RBP18.19■□□□□ 0.5
TNFRSF1A-204ENST00000440083 ZBTB40Q9NUA8 1239 aa18.19■□□□□ 0.5
TNFRSF1A-204ENST00000440083 TAF1P21675 1872 aa18.18■□□□□ 0.5
TNFRSF1A-204ENST00000440083 H7C1W4 665 aa18.18■□□□□ 0.5
TNFRSF1A-204ENST00000440083 CASP7P55210 303 aa18.18■□□□□ 0.5
TNFRSF1A-204ENST00000440083 OLFM4Q6UX06 510 aa18.18■□□□□ 0.5
TNFRSF1A-204ENST00000440083 CCDC85AQ96PX6 553 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1A-204ENST00000440083 SRCIN1Q9C0H9 1055 aa18.18■□□□□ 0.5
TNFRSF1A-204ENST00000440083 CNKSR1Q969H4 720 aa18.17■□□□□ 0.5
TNFRSF1A-204ENST00000440083 CDHR2Q9BYE9 1310 aa18.17■□□□□ 0.5
TNFRSF1A-204ENST00000440083 C21orf2O43822 256 aa18.16■□□□□ 0.5
TNFRSF1A-204ENST00000440083 ALDH1L1O75891 902 aa18.16■□□□□ 0.5
TNFRSF1A-204ENST00000440083 HOXA10P31260 410 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF1A-204ENST00000440083 HDAC1Q13547 482 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF1A-204ENST00000440083 INTS3Q68E01 1043 aaKnown RBP18.16■□□□□ 0.5
TNFRSF1A-204ENST00000440083 RBM17Q96I25 401 aaKnown RBP18.16■□□□□ 0.5
TNFRSF1A-204ENST00000440083 RBM19Q9Y4C8 960 aaKnown RBP18.16■□□□□ 0.5
TNFRSF1A-204ENST00000440083 UTRNP46939 3433 aa18.15■□□□□ 0.5
TNFRSF1A-204ENST00000440083 GRIN3BO60391 1043 aa18.15■□□□□ 0.5
TNFRSF1A-204ENST00000440083 ARHGAP27Q6ZUM4 889 aa18.15■□□□□ 0.5
TNFRSF1A-204ENST00000440083 GRM8O00222 908 aa18.14■□□□□ 0.49
TNFRSF1A-204ENST00000440083 ZBTB7BO15156 539 aaPredicted RBP18.14■□□□□ 0.49
TNFRSF1A-204ENST00000440083 PDE8AO60658 829 aa18.14■□□□□ 0.49
TNFRSF1A-204ENST00000440083 CCT4P50991 539 aaKnown RBP18.14■□□□□ 0.49
TNFRSF1A-204ENST00000440083 CTSWP56202 376 aa18.14■□□□□ 0.49
TNFRSF1A-204ENST00000440083 SF3B3Q15393 1217 aaKnown RBP18.14■□□□□ 0.49
TNFRSF1A-204ENST00000440083 MYH3P11055 1940 aa18.13■□□□□ 0.49
TNFRSF1A-204ENST00000440083 RGS3P49796 1198 aa18.13■□□□□ 0.49
TNFRSF1A-204ENST00000440083 RASSF7Q02833 373 aa18.13■□□□□ 0.49
TNFRSF1A-204ENST00000440083 EPHA10Q5JZY3 1008 aa18.13■□□□□ 0.49
TNFRSF1A-204ENST00000440083 C7orf43Q8WVR3 580 aa18.13■□□□□ 0.49
TNFRSF1A-204ENST00000440083 CRAMP1Q96RY5 1269 aa18.13■□□□□ 0.49
TNFRSF1A-204ENST00000440083 SEC31BQ9NQW1 1179 aa18.13■□□□□ 0.49
TNFRSF1A-204ENST00000440083 PPEF1O14829 653 aaPredicted RBP18.12■□□□□ 0.49
TNFRSF1A-204ENST00000440083 DDX46Q7L014 1031 aaKnown RBP18.12■□□□□ 0.49
TNFRSF1A-204ENST00000440083 CELF1Q92879 486 aaKnown RBP18.12■□□□□ 0.49
TNFRSF1A-204ENST00000440083 SUCLG2Q96I99 432 aa18.12■□□□□ 0.49
TNFRSF1A-204ENST00000440083 C9orf78Q9NZ63 289 aaPredicted RBP18.12■□□□□ 0.49
TNFRSF1A-204ENST00000440083 NFKBIEO00221 500 aa18.11■□□□□ 0.49
TNFRSF1A-204ENST00000440083 NBPF7P0C2Y1 421 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF1A-204ENST00000440083 ALDH1B1P30837 517 aa18.11■□□□□ 0.49
TNFRSF1A-204ENST00000440083 SKAP1Q86WV1 359 aa18.11■□□□□ 0.49
TNFRSF1A-204ENST00000440083 PRELPP51888 382 aa18.1■□□□□ 0.49
TNFRSF1A-204ENST00000440083 FOXO4P98177 505 aa18.1■□□□□ 0.49
TNFRSF1A-204ENST00000440083 GRAPQ13588 217 aa18.1■□□□□ 0.49
TNFRSF1A-204ENST00000440083 FAM161AQ3B820 660 aa18.1■□□□□ 0.49
TNFRSF1A-204ENST00000440083 CCDC152Q4G0S7 254 aa18.1■□□□□ 0.49
TNFRSF1A-204ENST00000440083 TTLL11Q8NHH1 800 aa18.1■□□□□ 0.49
TNFRSF1A-204ENST00000440083 GRAPLQ8TC17 118 aaPredicted RBP18.1■□□□□ 0.49
TNFRSF1A-204ENST00000440083 PLA2G12BQ9BX93 195 aa18.1■□□□□ 0.49
TNFRSF1A-204ENST00000440083 GREM2Q9H772 168 aa18.1■□□□□ 0.49
TNFRSF1A-204ENST00000440083 C1orf115Q9H7X2 142 aa18.1■□□□□ 0.49
TNFRSF1A-204ENST00000440083 CHD4Q14839 1912 aa18.1■□□□□ 0.49
TNFRSF1A-204ENST00000440083 FER1L6Q2WGJ9 1857 aa18.09■□□□□ 0.49
TNFRSF1A-204ENST00000440083 SNED1Q8TER0 1413 aa18.09■□□□□ 0.49
TNFRSF1A-204ENST00000440083 UTYO14607 1347 aa18.09■□□□□ 0.49
TNFRSF1A-204ENST00000440083 HSP90B1P14625 803 aaKnown RBP18.09■□□□□ 0.49
TNFRSF1A-204ENST00000440083 KAZALD1Q96I82 304 aa18.09■□□□□ 0.49
TNFRSF1A-204ENST00000440083 USP44Q9H0E7 712 aa18.09■□□□□ 0.49
TNFRSF1A-204ENST00000440083 SPEF2Q9C093 1822 aa18.09■□□□□ 0.49
TNFRSF1A-204ENST00000440083 CCDC93Q567U6 631 aa18.08■□□□□ 0.48
TNFRSF1A-204ENST00000440083 MEIS3Q99687 375 aa18.07■□□□□ 0.48
TNFRSF1A-204ENST00000440083 LRRC37AA6NMS7 1700 aa18.06■□□□□ 0.48
TNFRSF1A-204ENST00000440083 RTL9Q8NET4 1388 aa18.06■□□□□ 0.48
TNFRSF1A-204ENST00000440083 CSF1RP07333 972 aa18.06■□□□□ 0.48
TNFRSF1A-204ENST00000440083 PDE4AP27815 886 aa18.06■□□□□ 0.48
TNFRSF1A-204ENST00000440083 LMBR1LQ6UX01 489 aa18.06■□□□□ 0.48
TNFRSF1A-204ENST00000440083 SMC5Q8IY18 1101 aa18.06■□□□□ 0.48
TNFRSF1A-204ENST00000440083 BICC1Q9H694 974 aaKnown RBP18.06■□□□□ 0.48
TNFRSF1A-204ENST00000440083 CHMP3Q9Y3E7 222 aa18.06■□□□□ 0.48
TNFRSF1A-204ENST00000440083 ATP6V0A2Q9Y487 856 aa18.06■□□□□ 0.48
TNFRSF1A-204ENST00000440083 SBF1O95248 1867 aa18.05■□□□□ 0.48
TNFRSF1A-204ENST00000440083 BBOX1O75936 387 aa18.05■□□□□ 0.48
TNFRSF1A-204ENST00000440083 ANKRD44Q8N8A2 993 aa18.05■□□□□ 0.48
TNFRSF1A-204ENST00000440083 GCC1Q96CN9 775 aa18.05■□□□□ 0.48
TNFRSF1A-204ENST00000440083 CCDC88AQ3V6T2 1871 aa18.04■□□□□ 0.48
TNFRSF1A-204ENST00000440083 GNAI3P08754 354 aa18.04■□□□□ 0.48
TNFRSF1A-204ENST00000440083 ITGA6P23229 1130 aa18.04■□□□□ 0.48
TNFRSF1A-204ENST00000440083 RPS8P62241 208 aaKnown RBP18.04■□□□□ 0.48
TNFRSF1A-204ENST00000440083 SOGA3Q5TF21 947 aa18.04■□□□□ 0.48
TNFRSF1A-204ENST00000440083 C9orf131Q5VYM1 1079 aa18.04■□□□□ 0.48
TNFRSF1A-204ENST00000440083 TAOK3Q9H2K8 898 aa18.04■□□□□ 0.48
TNFRSF1A-204ENST00000440083 UBTFL1P0CB47 393 aaPredicted RBP18.03■□□□□ 0.48
TNFRSF1A-204ENST00000440083 ANKRD18AQ8IVF6 992 aa18.03■□□□□ 0.48
TNFRSF1A-204ENST00000440083 SP8Q8IXZ3 490 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms