RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 SH3TC1Q8TE82 1336 aa18.26■□□□□ 0.51
CPSF7-205ENST00000439958 IL15P40933 162 aaPredicted RBP18.26■□□□□ 0.51
CPSF7-205ENST00000439958 RBM25P49756 843 aaKnown RBP18.26■□□□□ 0.51
CPSF7-205ENST00000439958 USPL1Q5W0Q7 1092 aa18.26■□□□□ 0.51
CPSF7-205ENST00000439958 MPHOSPH8Q99549 860 aa18.26■□□□□ 0.51
CPSF7-205ENST00000439958 AFDNP55196 1824 aaKnown RBP18.26■□□□□ 0.51
CPSF7-205ENST00000439958 A0A1B0GUL7 405 aa18.26■□□□□ 0.51
CPSF7-205ENST00000439958 GOLIM4O00461 696 aa18.26■□□□□ 0.51
CPSF7-205ENST00000439958 CD2BP2O95400 341 aaKnown RBP18.26■□□□□ 0.51
CPSF7-205ENST00000439958 CTSWP56202 376 aa18.26■□□□□ 0.51
CPSF7-205ENST00000439958 FAM227BQ96M60 508 aa18.26■□□□□ 0.51
CPSF7-205ENST00000439958 AK7Q96M32 723 aa18.25■□□□□ 0.51
CPSF7-205ENST00000439958 CHGBP05060 677 aa18.25■□□□□ 0.51
CPSF7-205ENST00000439958 NEK4P51957 841 aa18.25■□□□□ 0.51
CPSF7-205ENST00000439958 COL15A1P39059 1388 aa18.25■□□□□ 0.51
CPSF7-205ENST00000439958 SNAP23O00161 211 aa18.24■□□□□ 0.51
CPSF7-205ENST00000439958 TTLL11Q8NHH1 800 aa18.24■□□□□ 0.51
CPSF7-205ENST00000439958 RTCBQ9Y3I0 505 aaKnown RBP18.24■□□□□ 0.51
CPSF7-205ENST00000439958 SEC31BQ9NQW1 1179 aa18.24■□□□□ 0.51
CPSF7-205ENST00000439958 GOLGB1Q14789 3259 aaKnown RBP18.24■□□□□ 0.51
CPSF7-205ENST00000439958 EVI5LQ96CN4 794 aa18.24■□□□□ 0.51
CPSF7-205ENST00000439958 ARFGEF2Q9Y6D5 1785 aa18.24■□□□□ 0.51
CPSF7-205ENST00000439958 EIF5BO60841 1220 aaKnown RBP18.23■□□□□ 0.51
CPSF7-205ENST00000439958 CAMTA2O94983 1202 aa18.23■□□□□ 0.51
CPSF7-205ENST00000439958 ATG9AQ7Z3C6 839 aa18.23■□□□□ 0.51
CPSF7-205ENST00000439958 ERVV-1B6SEH8 477 aa18.23■□□□□ 0.51
CPSF7-205ENST00000439958 TTC39AQ5SRH9 613 aa18.23■□□□□ 0.51
CPSF7-205ENST00000439958 RUFY2Q8WXA3 655 aa18.23■□□□□ 0.51
CPSF7-205ENST00000439958 GLI3P10071 1580 aa18.23■□□□□ 0.51
CPSF7-205ENST00000439958 PDE8AO60658 829 aa18.23■□□□□ 0.51
CPSF7-205ENST00000439958 ADORA1P30542 326 aa18.23■□□□□ 0.51
CPSF7-205ENST00000439958 RFC4P35249 363 aa18.23■□□□□ 0.51
CPSF7-205ENST00000439958 LARP6Q9BRS8 491 aaKnown RBP18.23■□□□□ 0.51
CPSF7-205ENST00000439958 PALD1Q9ULE6 856 aa18.23■□□□□ 0.51
CPSF7-205ENST00000439958 TAF5LO75529 589 aa18.22■□□□□ 0.51
CPSF7-205ENST00000439958 IFIT1P09914 478 aaKnown RBP18.22■□□□□ 0.51
CPSF7-205ENST00000439958 TRIM28Q13263 835 aaKnown RBP18.22■□□□□ 0.51
CPSF7-205ENST00000439958 SLFNL1Q499Z3 407 aa18.22■□□□□ 0.51
CPSF7-205ENST00000439958 FAM196AQ6ZSG2 479 aa18.22■□□□□ 0.51
CPSF7-205ENST00000439958 AOX1Q06278 1338 aa18.22■□□□□ 0.51
CPSF7-205ENST00000439958 NRAPQ86VF7 1730 aa18.22■□□□□ 0.51
CPSF7-205ENST00000439958 NMIQ13287 307 aaPredicted RBP18.22■□□□□ 0.51
CPSF7-205ENST00000439958 KRT27Q7Z3Y8 459 aa18.22■□□□□ 0.51
CPSF7-205ENST00000439958 LAMB4A4D0S4 1761 aa18.21■□□□□ 0.51
CPSF7-205ENST00000439958 NBPF5PQ86XG9 351 aaPredicted RBP18.21■□□□□ 0.51
CPSF7-205ENST00000439958 KIF2CQ99661 725 aa18.21■□□□□ 0.51
CPSF7-205ENST00000439958 ST18O60284 1047 aa18.2■□□□□ 0.5
CPSF7-205ENST00000439958 CCDC158Q5M9N0 1113 aa18.2■□□□□ 0.5
CPSF7-205ENST00000439958 UBR2Q8IWV8 1755 aa18.2■□□□□ 0.5
CPSF7-205ENST00000439958 ZNF34Q8IZ26 560 aa18.2■□□□□ 0.5
CPSF7-205ENST00000439958 SETDB2Q96T68 719 aa18.2■□□□□ 0.5
CPSF7-205ENST00000439958 ATP2B3Q16720 1220 aa18.2■□□□□ 0.5
CPSF7-205ENST00000439958 PI16Q6UXB8 463 aa18.2■□□□□ 0.5
CPSF7-205ENST00000439958 RABEP1Q15276 862 aa18.19■□□□□ 0.5
CPSF7-205ENST00000439958 PRPF40BQ6NWY9 871 aaKnown RBP18.19■□□□□ 0.5
CPSF7-205ENST00000439958 ERFEQ4G0M1 354 aa18.19■□□□□ 0.5
CPSF7-205ENST00000439958 TBC1D9BQ66K14 1250 aa18.19■□□□□ 0.5
CPSF7-205ENST00000439958 CCDC129Q6ZRS4 1044 aa18.19■□□□□ 0.5
CPSF7-205ENST00000439958 IQSEC3Q9UPP2 1182 aaPredicted RBP18.19■□□□□ 0.5
CPSF7-205ENST00000439958 AMIGO3Q86WK7 504 aa18.19■□□□□ 0.5
CPSF7-205ENST00000439958 XAGE2Q96GT9 111 aa18.19■□□□□ 0.5
CPSF7-205ENST00000439958 A0A0D9SFI3 127 aa18.18■□□□□ 0.5
CPSF7-205ENST00000439958 SGSM2O43147 1006 aa18.18■□□□□ 0.5
CPSF7-205ENST00000439958 SEC62Q99442 399 aaKnown RBP18.18■□□□□ 0.5
CPSF7-205ENST00000439958 WASHC4Q2M389 1173 aa18.18■□□□□ 0.5
CPSF7-205ENST00000439958 CPA1P15085 419 aa18.18■□□□□ 0.5
CPSF7-205ENST00000439958 IGHMBP2P38935 993 aaKnown RBP18.18■□□□□ 0.5
CPSF7-205ENST00000439958 CCDC152Q4G0S7 254 aa18.17■□□□□ 0.5
CPSF7-205ENST00000439958 PARP10Q53GL7 1025 aa18.17■□□□□ 0.5
CPSF7-205ENST00000439958 FOXD4L5Q5VV16 416 aaPredicted RBP18.17■□□□□ 0.5
CPSF7-205ENST00000439958 FOXD4L4Q8WXT5 416 aaPredicted RBP18.17■□□□□ 0.5
CPSF7-205ENST00000439958 AKAP2Q9Y2D5 859 aa18.17■□□□□ 0.5
CPSF7-205ENST00000439958 K7ELQ4 463 aaPredicted RBP18.17■□□□□ 0.5
CPSF7-205ENST00000439958 PTH1RQ03431 593 aa18.17■□□□□ 0.5
CPSF7-205ENST00000439958 TRAPPC3LQ5T215 181 aa18.17■□□□□ 0.5
CPSF7-205ENST00000439958 ARHGEF1Q92888 912 aaKnown RBP18.17■□□□□ 0.5
CPSF7-205ENST00000439958 DTNBO60941 627 aa18.16■□□□□ 0.5
CPSF7-205ENST00000439958 ANTXR1Q9H6X2 564 aa18.16■□□□□ 0.5
CPSF7-205ENST00000439958 NWD2Q9ULI1 1742 aa18.16■□□□□ 0.5
CPSF7-205ENST00000439958 FRAT2O75474 233 aaPredicted RBP18.16■□□□□ 0.5
CPSF7-205ENST00000439958 PAG1Q9NWQ8 432 aa18.16■□□□□ 0.5
CPSF7-205ENST00000439958 ATP5JP18859 108 aa18.16■□□□□ 0.5
CPSF7-205ENST00000439958 NFKBIBQ15653 356 aa18.15■□□□□ 0.5
CPSF7-205ENST00000439958 PAPPAQ13219 1627 aa18.15■□□□□ 0.5
CPSF7-205ENST00000439958 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.15■□□□□ 0.5
CPSF7-205ENST00000439958 CSF1RP07333 972 aa18.15■□□□□ 0.5
CPSF7-205ENST00000439958 LRRC4BQ9NT99 713 aa18.15■□□□□ 0.5
CPSF7-205ENST00000439958 IDH1O75874 414 aaKnown RBP18.14■□□□□ 0.49
CPSF7-205ENST00000439958 N4BP2Q86UW6 1770 aaPredicted RBP18.14■□□□□ 0.49
CPSF7-205ENST00000439958 RPS6KA4O75676 772 aa18.14■□□□□ 0.49
CPSF7-205ENST00000439958 ZNF589Q86UQ0 364 aaPredicted RBP18.14■□□□□ 0.49
CPSF7-205ENST00000439958 TCEANC2Q96MN5 208 aa18.14■□□□□ 0.49
CPSF7-205ENST00000439958 CDHR2Q9BYE9 1310 aa18.13■□□□□ 0.49
CPSF7-205ENST00000439958 NTSR2O95665 410 aa18.13■□□□□ 0.49
CPSF7-205ENST00000439958 C3orf67Q6ZVT6 689 aa18.13■□□□□ 0.49
CPSF7-205ENST00000439958 HIP1O00291 1037 aa18.12■□□□□ 0.49
CPSF7-205ENST00000439958 APBA3O96018 575 aa18.12■□□□□ 0.49
CPSF7-205ENST00000439958 CASTP20810 708 aaKnown RBP18.12■□□□□ 0.49
CPSF7-205ENST00000439958 SCARF1Q14162 830 aa18.12■□□□□ 0.49
CPSF7-205ENST00000439958 JAKMIP1Q96N16 626 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms