RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 MARVELD3Q96A59 401 aa13.9□□□□□ -0.18
LMO3-207ENST00000439600 LIMD1Q9UGP4 676 aa13.9□□□□□ -0.18
LMO3-207ENST00000439600 PALLDQ8WX93 1383 aa13.89□□□□□ -0.19
LMO3-207ENST00000439600 HEG1Q9ULI3 1381 aa13.89□□□□□ -0.19
LMO3-207ENST00000439600 LOC102724428A0A0B4J2F2 783 aa13.89□□□□□ -0.19
LMO3-207ENST00000439600 VAMP4O75379 141 aa13.89□□□□□ -0.19
LMO3-207ENST00000439600 ATP6V1AP38606 617 aa13.89□□□□□ -0.19
LMO3-207ENST00000439600 SIK1P57059 783 aa13.89□□□□□ -0.19
LMO3-207ENST00000439600 SLF2Q8IX21 1173 aa13.89□□□□□ -0.19
LMO3-207ENST00000439600 C8orf58Q8NAV2 365 aa13.89□□□□□ -0.19
LMO3-207ENST00000439600 ARXQ96QS3 562 aa13.89□□□□□ -0.19
LMO3-207ENST00000439600 A6NJR5 290 aa13.88□□□□□ -0.19
LMO3-207ENST00000439600 ELL2O00472 640 aaPredicted RBP13.88□□□□□ -0.19
LMO3-207ENST00000439600 BAG6P46379 1132 aa13.88□□□□□ -0.19
LMO3-207ENST00000439600 ALDH1L2Q3SY69 923 aa13.88□□□□□ -0.19
LMO3-207ENST00000439600 STK31Q9BXU1 1019 aa13.88□□□□□ -0.19
LMO3-207ENST00000439600 SEPT9Q9UHD8 586 aaPredicted RBP13.88□□□□□ -0.19
LMO3-207ENST00000439600 SHANK3Q9BYB0 1731 aa13.87□□□□□ -0.19
LMO3-207ENST00000439600 MOXD2PA6NHM9 499 aa13.87□□□□□ -0.19
LMO3-207ENST00000439600 RFC5P40937 340 aa13.87□□□□□ -0.19
LMO3-207ENST00000439600 HDGFL1Q5TGJ6 251 aa13.87□□□□□ -0.19
LMO3-207ENST00000439600 NPM2Q86SE8 214 aaKnown RBP13.87□□□□□ -0.19
LMO3-207ENST00000439600 CCNL1Q9UK58 526 aaPredicted RBP13.87□□□□□ -0.19
LMO3-207ENST00000439600 ERBB4Q15303 1308 aa13.87□□□□□ -0.19
LMO3-207ENST00000439600 SPDYE5A6NIY4 337 aa13.86□□□□□ -0.19
LMO3-207ENST00000439600 EIF2S2P20042 333 aaKnown RBP13.86□□□□□ -0.19
LMO3-207ENST00000439600 PTF1AQ7RTS3 328 aa13.86□□□□□ -0.19
LMO3-207ENST00000439600 TSPYL6Q8N831 410 aa13.86□□□□□ -0.19
LMO3-207ENST00000439600 DBF4Q9UBU7 674 aaPredicted RBP13.86□□□□□ -0.19
LMO3-207ENST00000439600 SCN11AQ9UI33 1791 aa13.86□□□□□ -0.19
LMO3-207ENST00000439600 RC3H1Q5TC82 1133 aaKnown RBP13.85□□□□□ -0.19
LMO3-207ENST00000439600 PRPF38BQ5VTL8 546 aaKnown RBP13.85□□□□□ -0.19
LMO3-207ENST00000439600 RCAN3Q9UKA8 241 aa13.85□□□□□ -0.19
LMO3-207ENST00000439600 USP16Q9Y5T5 823 aa13.85□□□□□ -0.19
LMO3-207ENST00000439600 BHMG1C9JSJ3 638 aaPredicted RBP13.84□□□□□ -0.19
LMO3-207ENST00000439600 SLC10A3P09131 477 aa13.84□□□□□ -0.19
LMO3-207ENST00000439600 TXNRD1Q16881 649 aa13.84□□□□□ -0.19
LMO3-207ENST00000439600 NECTIN2Q92692 538 aa13.84□□□□□ -0.19
LMO3-207ENST00000439600 HS3ST6Q96QI5 342 aa13.84□□□□□ -0.19
LMO3-207ENST00000439600 HYPKQ9NX55 129 aa13.84□□□□□ -0.19
LMO3-207ENST00000439600 DLG5Q8TDM6 1919 aa13.84□□□□□ -0.19
LMO3-207ENST00000439600 IPO8O15397 1037 aaKnown RBP13.83□□□□□ -0.2
LMO3-207ENST00000439600 CYP19A1P11511 503 aaPredicted RBP13.83□□□□□ -0.2
LMO3-207ENST00000439600 RARSP54136 660 aaKnown RBP13.83□□□□□ -0.2
LMO3-207ENST00000439600 KRT24Q2M2I5 525 aa13.83□□□□□ -0.2
LMO3-207ENST00000439600 DNAJC10Q8IXB1 793 aa13.83□□□□□ -0.2
LMO3-207ENST00000439600 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.83□□□□□ -0.2
LMO3-207ENST00000439600 FAM163AQ96GL9 167 aaPredicted RBP13.83□□□□□ -0.2
LMO3-207ENST00000439600 DDX21Q9NR30 783 aaKnown RBP eCLIP13.83□□□□□ -0.2
LMO3-207ENST00000439600 HOXA2O43364 376 aa13.82□□□□□ -0.2
LMO3-207ENST00000439600 LILRB3O75022 631 aa13.82□□□□□ -0.2
LMO3-207ENST00000439600 IFFO2Q5TF58 517 aa13.82□□□□□ -0.2
LMO3-207ENST00000439600 SLC4A9Q96Q91 983 aa13.82□□□□□ -0.2
LMO3-207ENST00000439600 NDUFV2P19404 249 aa13.81□□□□□ -0.2
LMO3-207ENST00000439600 GRIPAP1Q4V328 841 aa13.81□□□□□ -0.2
LMO3-207ENST00000439600 CAMKK2Q96RR4 588 aa13.81□□□□□ -0.2
LMO3-207ENST00000439600 SMC4Q9NTJ3 1288 aa13.81□□□□□ -0.2
LMO3-207ENST00000439600 CCDC87Q9NVE4 849 aa13.81□□□□□ -0.2
LMO3-207ENST00000439600 NHSQ6T4R5 1651 aa13.81□□□□□ -0.2
LMO3-207ENST00000439600 EP400Q96L91 3159 aa13.81□□□□□ -0.2
LMO3-207ENST00000439600 A0A087WZG4 1122 aa13.8□□□□□ -0.2
LMO3-207ENST00000439600 DDX58O95786 925 aaKnown RBP13.8□□□□□ -0.2
LMO3-207ENST00000439600 IL6STP40189 918 aaPredicted RBP13.8□□□□□ -0.2
LMO3-207ENST00000439600 ITPK1Q13572 414 aa13.8□□□□□ -0.2
LMO3-207ENST00000439600 SSH1Q8WYL5 1049 aa13.8□□□□□ -0.2
LMO3-207ENST00000439600 ARHGAP45Q92619 1136 aa13.8□□□□□ -0.2
LMO3-207ENST00000439600 DOT1LQ8TEK3 1739 aa13.8□□□□□ -0.2
LMO3-207ENST00000439600 CNTNAP4Q9C0A0 1308 aa13.8□□□□□ -0.2
LMO3-207ENST00000439600 BRWD3Q6RI45 1802 aa13.8□□□□□ -0.2
LMO3-207ENST00000439600 KCPQ6ZWJ8 1503 aa13.8□□□□□ -0.2
LMO3-207ENST00000439600 TOGARAM1Q9Y4F4 1720 aa13.79□□□□□ -0.2
LMO3-207ENST00000439600 PRAMEF22A3QJZ6 481 aa13.79□□□□□ -0.2
LMO3-207ENST00000439600 CRKLP46109 303 aaKnown RBP13.79□□□□□ -0.2
LMO3-207ENST00000439600 NBPF14Q5TI25 921 aa13.79□□□□□ -0.2
LMO3-207ENST00000439600 SAMD7Q7Z3H4 446 aa13.79□□□□□ -0.2
LMO3-207ENST00000439600 FLAD1Q8NFF5 587 aa13.79□□□□□ -0.2
LMO3-207ENST00000439600 KIF16BQ96L93 1317 aa13.79□□□□□ -0.2
LMO3-207ENST00000439600 RAD21O60216 631 aa13.78□□□□□ -0.2
LMO3-207ENST00000439600 RPS6KA4O75676 772 aa13.78□□□□□ -0.2
LMO3-207ENST00000439600 A1BGP04217 495 aa13.78□□□□□ -0.2
LMO3-207ENST00000439600 DEFB132Q7Z7B7 95 aa13.78□□□□□ -0.2
LMO3-207ENST00000439600 MRPL50Q8N5N7 158 aaKnown RBP13.78□□□□□ -0.2
LMO3-207ENST00000439600 ZFRQ96KR1 1074 aaKnown RBP13.78□□□□□ -0.2
LMO3-207ENST00000439600 ZBTB3Q9H5J0 574 aa13.78□□□□□ -0.2
LMO3-207ENST00000439600 CHPF2Q9P2E5 772 aa13.78□□□□□ -0.2
LMO3-207ENST00000439600 RTCBQ9Y3I0 505 aaKnown RBP13.78□□□□□ -0.2
LMO3-207ENST00000439600 PTPRCP08575 1304 aa13.78□□□□□ -0.2
LMO3-207ENST00000439600 APBB1O00213 710 aa13.77□□□□□ -0.21
LMO3-207ENST00000439600 SIPA1L3O60292 1781 aaPredicted RBP13.77□□□□□ -0.21
LMO3-207ENST00000439600 FDX1P10109 184 aa13.77□□□□□ -0.21
LMO3-207ENST00000439600 MYL6BP14649 208 aa13.77□□□□□ -0.21
LMO3-207ENST00000439600 CANXP27824 592 aaKnown RBP13.77□□□□□ -0.21
LMO3-207ENST00000439600 LSM11P83369 360 aaKnown RBP eCLIP13.77□□□□□ -0.21
LMO3-207ENST00000439600 EZH2Q15910 746 aaKnown RBP13.77□□□□□ -0.21
LMO3-207ENST00000439600 INTS5Q6P9B9 1019 aaKnown RBP13.77□□□□□ -0.21
LMO3-207ENST00000439600 LINC00116Q8NCU8 138 aa13.77□□□□□ -0.21
LMO3-207ENST00000439600 API5Q9BZZ5 524 aaKnown RBP13.77□□□□□ -0.21
LMO3-207ENST00000439600 LRRC4BQ9NT99 713 aa13.77□□□□□ -0.21
LMO3-207ENST00000439600 YY1P25490 414 aa13.76□□□□□ -0.21
LMO3-207ENST00000439600 QPCTQ16769 361 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms