RNA–Protein interactions for RNA: ENST00000439554.1

FRMPD3-202, Transcript of FERM and PDZ domain containing 3, humanhuman

APPRIS ALT2 TSL 5

Gene FRMPD3, Length 7,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMPD3-202ENST00000439554 TMX3Q96JJ7 454 aa16.34■□□□□ 0.21
FRMPD3-202ENST00000439554 ATP2B2Q01814 1243 aa16.34■□□□□ 0.21
FRMPD3-202ENST00000439554 CACNA2D4Q7Z3S7 1137 aa16.34■□□□□ 0.21
FRMPD3-202ENST00000439554 CCDC94Q9BW85 323 aaPredicted RBP16.34■□□□□ 0.21
FRMPD3-202ENST00000439554 TRAPPC8Q9Y2L5 1435 aa16.33■□□□□ 0.21
FRMPD3-202ENST00000439554 NBPF7P0C2Y1 421 aaPredicted RBP16.33■□□□□ 0.21
FRMPD3-202ENST00000439554 USP16Q9Y5T5 823 aa16.33■□□□□ 0.21
FRMPD3-202ENST00000439554 METAP2P50579 478 aaKnown RBP eCLIP16.33■□□□□ 0.2
FRMPD3-202ENST00000439554 CEP112Q8N8E3 955 aa16.33■□□□□ 0.2
FRMPD3-202ENST00000439554 CEP135Q66GS9 1140 aa16.33■□□□□ 0.2
FRMPD3-202ENST00000439554 MFSD6Q6ZSS7 791 aa16.33■□□□□ 0.2
FRMPD3-202ENST00000439554 RTL9Q8NET4 1388 aa16.33■□□□□ 0.2
FRMPD3-202ENST00000439554 ZNF165P49910 485 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 NLRP5P59047 1200 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 ZSCAN23Q3MJ62 389 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 FERMT3Q86UX7 667 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 FMNL3Q8IVF7 1028 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 ZMYND15Q9H091 742 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 ZC3H6P61129 1189 aaKnown RBP16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 KRT28Q7Z3Y7 464 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 TESK2Q96S53 571 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 ARFGAP3Q9NP61 516 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 SDSP20132 328 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 SKIDA1Q1XH10 827 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 BCL11BQ9C0K0 894 aaPredicted RBP16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 CCDC8Q9H0W5 538 aaPredicted RBP16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 ORC3Q9UBD5 711 aaPredicted RBP16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 PZPP20742 1482 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 PPP1R2P41236 205 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 CFAP57Q96MR6 1250 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 MAP3K5Q99683 1374 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 F6X3S4 739 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 TUBB2AQ13885 445 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 LINS1Q8NG48 757 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 TUBB2BQ9BVA1 445 aa16.32■□□□□ 0.2
FRMPD3-202ENST00000439554 SSBP05455 408 aaKnown RBP eCLIP16.31■□□□□ 0.2
FRMPD3-202ENST00000439554 CAMK4Q16566 473 aa16.31■□□□□ 0.2
FRMPD3-202ENST00000439554 CRNKL1Q9BZJ0 848 aaKnown RBP16.31■□□□□ 0.2
FRMPD3-202ENST00000439554 ABCF2Q9UG63 623 aa16.31■□□□□ 0.2
FRMPD3-202ENST00000439554 IRX3P78415 501 aaPredicted RBP16.31■□□□□ 0.2
FRMPD3-202ENST00000439554 MCMDC2Q4G0Z9 681 aa16.31■□□□□ 0.2
FRMPD3-202ENST00000439554 TMEM67Q5HYA8 995 aa16.31■□□□□ 0.2
FRMPD3-202ENST00000439554 ADCY5O95622 1261 aa16.31■□□□□ 0.2
FRMPD3-202ENST00000439554 CCDC152Q4G0S7 254 aa16.31■□□□□ 0.2
FRMPD3-202ENST00000439554 ANKRD13DQ6ZTN6 518 aa16.31■□□□□ 0.2
FRMPD3-202ENST00000439554 MNAT1P51948 309 aa16.31■□□□□ 0.2
FRMPD3-202ENST00000439554 BLMP54132 1417 aaPredicted RBP16.31■□□□□ 0.2
FRMPD3-202ENST00000439554 HSF2BPO75031 334 aa16.31■□□□□ 0.2
FRMPD3-202ENST00000439554 MIS18AQ9NYP9 233 aa16.31■□□□□ 0.2
FRMPD3-202ENST00000439554 RAB3GAP1Q15042 981 aa16.31■□□□□ 0.2
FRMPD3-202ENST00000439554 NAP1L4Q99733 375 aaKnown RBP16.31■□□□□ 0.2
FRMPD3-202ENST00000439554 RNF187Q5TA31 235 aaPredicted RBP16.3■□□□□ 0.2
FRMPD3-202ENST00000439554 BRAPQ7Z569 592 aa16.3■□□□□ 0.2
FRMPD3-202ENST00000439554 MRPS27Q92552 414 aaKnown RBP16.3■□□□□ 0.2
FRMPD3-202ENST00000439554 EDC4Q6P2E9 1401 aaKnown RBP16.3■□□□□ 0.2
FRMPD3-202ENST00000439554 EXOC5O00471 708 aa16.3■□□□□ 0.2
FRMPD3-202ENST00000439554 KDM4AO75164 1064 aa16.3■□□□□ 0.2
FRMPD3-202ENST00000439554 SETSIPP0DME0 302 aa16.3■□□□□ 0.2
FRMPD3-202ENST00000439554 GTF2F1P35269 517 aaKnown RBP eCLIP16.3■□□□□ 0.2
FRMPD3-202ENST00000439554 MPRIPQ6WCQ1 1025 aa16.3■□□□□ 0.2
FRMPD3-202ENST00000439554 FAM177A1Q8N128 213 aaPredicted RBP16.3■□□□□ 0.2
FRMPD3-202ENST00000439554 MSH6P52701 1360 aa16.3■□□□□ 0.2
FRMPD3-202ENST00000439554 PI4KAP2A4QPH2 592 aa16.3■□□□□ 0.2
FRMPD3-202ENST00000439554 CRACR2BQ8N4Y2 399 aaPredicted RBP16.3■□□□□ 0.2
FRMPD3-202ENST00000439554 PI4KAP1Q8N8J0 262 aa16.3■□□□□ 0.2
FRMPD3-202ENST00000439554 ERMNQ8TAM6 284 aa16.3■□□□□ 0.2
FRMPD3-202ENST00000439554 TTC14Q96N46 770 aa16.3■□□□□ 0.2
FRMPD3-202ENST00000439554 C8orf34Q49A92 452 aa16.3■□□□□ 0.2
FRMPD3-202ENST00000439554 ARHGEF5Q12774 1597 aa16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 NPHP3Q7Z494 1330 aa16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 ARFGAP2Q8N6H7 521 aa16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 NUP88Q99567 741 aaPredicted RBP16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 MPHOSPH10O00566 681 aaKnown RBP16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 F13A1P00488 732 aa16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 PRPHP41219 470 aa16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 RBM5P52756 815 aaKnown RBP eCLIP16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 USP37Q86T82 979 aa16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 CEP63Q96MT8 703 aa16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 KAT14Q9H8E8 782 aa16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 USP25Q9UHP3 1055 aa16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 GRM8O00222 908 aa16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 ZSCAN29Q8IWY8 852 aaPredicted RBP16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 KLHL34Q8N239 644 aa16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 SAMD9Q5K651 1589 aa16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 PIP4K2BP78356 416 aa16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 ESR2Q92731 530 aa16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 GCC2Q8IWJ2 1684 aa16.29■□□□□ 0.2
FRMPD3-202ENST00000439554 SAMD1Q6SPF0 538 aaPredicted RBP16.28■□□□□ 0.2
FRMPD3-202ENST00000439554 OGFRQ9NZT2 677 aa16.28■□□□□ 0.2
FRMPD3-202ENST00000439554 SH3BGRP55822 239 aaPredicted RBP16.28■□□□□ 0.2
FRMPD3-202ENST00000439554 ANKS4BQ8N8V4 417 aa16.28■□□□□ 0.2
FRMPD3-202ENST00000439554 ZBTB40Q9NUA8 1239 aa16.28■□□□□ 0.2
FRMPD3-202ENST00000439554 ZKSCAN5Q9Y2L8 839 aa16.28■□□□□ 0.2
FRMPD3-202ENST00000439554 MINDY4BA8MYZ0 360 aa16.28■□□□□ 0.2
FRMPD3-202ENST00000439554 HLA-DOAP06340 250 aa16.28■□□□□ 0.2
FRMPD3-202ENST00000439554 PLVAPQ9BX97 442 aa16.28■□□□□ 0.2
FRMPD3-202ENST00000439554 XPCQ01831 940 aaPredicted RBP16.28■□□□□ 0.2
FRMPD3-202ENST00000439554 LDHAL6AQ6ZMR3 332 aa16.28■□□□□ 0.2
FRMPD3-202ENST00000439554 ADGBQ8N7X0 1667 aa16.28■□□□□ 0.2
FRMPD3-202ENST00000439554 LMAN1P49257 510 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms