RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 RTL5Q5HYW3 569 aaPredicted RBP26.2■■□□□ 1.78
NCKIPSD-206ENST00000439518 TMC4Q7Z404 712 aa26.2■■□□□ 1.78
NCKIPSD-206ENST00000439518 JMYQ8N9B5 988 aa26.2■■□□□ 1.78
NCKIPSD-206ENST00000439518 SUPT20HQ8NEM7 779 aa26.2■■□□□ 1.78
NCKIPSD-206ENST00000439518 IRS4O14654 1257 aaPredicted RBP26.19■■□□□ 1.78
NCKIPSD-206ENST00000439518 DPP8Q6V1X1 898 aaPredicted RBP26.19■■□□□ 1.78
NCKIPSD-206ENST00000439518 NIM1KQ8IY84 436 aa26.19■■□□□ 1.78
NCKIPSD-206ENST00000439518 MPNDQ8N594 471 aa26.19■■□□□ 1.78
NCKIPSD-206ENST00000439518 ZBTB38Q8NAP3 1195 aaPredicted RBP26.19■■□□□ 1.78
NCKIPSD-206ENST00000439518 MYD88Q99836 296 aa26.19■■□□□ 1.78
NCKIPSD-206ENST00000439518 TAF1P21675 1872 aa26.19■■□□□ 1.78
NCKIPSD-206ENST00000439518 CCDC191Q8NCU4 936 aa26.18■■□□□ 1.78
NCKIPSD-206ENST00000439518 GJA3Q9Y6H8 435 aa26.18■■□□□ 1.78
NCKIPSD-206ENST00000439518 DDX58O95786 925 aaKnown RBP26.17■■□□□ 1.78
NCKIPSD-206ENST00000439518 PNMA8AQ86V59 439 aaPredicted RBP26.17■■□□□ 1.78
NCKIPSD-206ENST00000439518 METTL22Q9BUU2 404 aaPredicted RBP26.17■■□□□ 1.78
NCKIPSD-206ENST00000439518 EAPPQ56P03 285 aaPredicted RBP26.16■■□□□ 1.78
NCKIPSD-206ENST00000439518 CELF1Q92879 486 aaKnown RBP26.16■■□□□ 1.78
NCKIPSD-206ENST00000439518 ADAMTSL1Q8N6G6 1762 aa26.15■■□□□ 1.78
NCKIPSD-206ENST00000439518 PCCAP05165 728 aaPredicted RBP26.15■■□□□ 1.78
NCKIPSD-206ENST00000439518 KIAA2012Q0VF49 1180 aa26.15■■□□□ 1.78
NCKIPSD-206ENST00000439518 TWISTNBQ3B726 338 aaPredicted RBP26.15■■□□□ 1.78
NCKIPSD-206ENST00000439518 ZNRF3Q9ULT6 936 aa26.15■■□□□ 1.78
NCKIPSD-206ENST00000439518 PASKQ96RG2 1323 aa26.14■■□□□ 1.78
NCKIPSD-206ENST00000439518 LRRC37AA6NMS7 1700 aa26.14■■□□□ 1.78
NCKIPSD-206ENST00000439518 ITGBL1O95965 494 aaPredicted RBP26.14■■□□□ 1.78
NCKIPSD-206ENST00000439518 SCNN1DP51172 638 aa26.14■■□□□ 1.78
NCKIPSD-206ENST00000439518 KSR2Q6VAB6 950 aa26.14■■□□□ 1.78
NCKIPSD-206ENST00000439518 STK31Q9BXU1 1019 aa26.14■■□□□ 1.78
NCKIPSD-206ENST00000439518 CWC25Q9NXE8 425 aaPredicted RBP26.14■■□□□ 1.78
NCKIPSD-206ENST00000439518 MAP3K2Q9Y2U5 619 aa26.14■■□□□ 1.78
NCKIPSD-206ENST00000439518 COL4A1P02462 1669 aa26.13■■□□□ 1.77
NCKIPSD-206ENST00000439518 DUOX1Q9NRD9 1551 aa26.13■■□□□ 1.77
NCKIPSD-206ENST00000439518 HSP90B1P14625 803 aaKnown RBP26.13■■□□□ 1.77
NCKIPSD-206ENST00000439518 WDR63Q8IWG1 891 aa26.13■■□□□ 1.77
NCKIPSD-206ENST00000439518 LTBP1Q14766 1721 aa26.12■■□□□ 1.77
NCKIPSD-206ENST00000439518 PI4KAP2A4QPH2 592 aa26.12■■□□□ 1.77
NCKIPSD-206ENST00000439518 CXCL9Q07325 125 aa26.12■■□□□ 1.77
NCKIPSD-206ENST00000439518 PI4KAP1Q8N8J0 262 aa26.12■■□□□ 1.77
NCKIPSD-206ENST00000439518 CREBZFQ9NS37 354 aa26.12■■□□□ 1.77
NCKIPSD-206ENST00000439518 CLEC11AQ9Y240 323 aa26.12■■□□□ 1.77
NCKIPSD-206ENST00000439518 LMOD1P29536 600 aaPredicted RBP26.11■■□□□ 1.77
NCKIPSD-206ENST00000439518 EPS15P42566 896 aa26.11■■□□□ 1.77
NCKIPSD-206ENST00000439518 RPS8P62241 208 aaKnown RBP26.11■■□□□ 1.77
NCKIPSD-206ENST00000439518 FANCIQ9NVI1 1328 aa26.11■■□□□ 1.77
NCKIPSD-206ENST00000439518 IGKV5-2P06315 115 aa26.1■■□□□ 1.77
NCKIPSD-206ENST00000439518 G2E3Q7L622 706 aa26.1■■□□□ 1.77
NCKIPSD-206ENST00000439518 PCNTO95613 3336 aa26.09■■□□□ 1.77
NCKIPSD-206ENST00000439518 PDE8AO60658 829 aa26.09■■□□□ 1.77
NCKIPSD-206ENST00000439518 SLC4A2P04920 1241 aa26.09■■□□□ 1.77
NCKIPSD-206ENST00000439518 JARID2Q92833 1246 aaPredicted RBP26.09■■□□□ 1.77
NCKIPSD-206ENST00000439518 SALL2Q9Y467 1007 aaPredicted RBP26.09■■□□□ 1.77
NCKIPSD-206ENST00000439518 MAP1SQ66K74 1059 aaPredicted RBP26.08■■□□□ 1.77
NCKIPSD-206ENST00000439518 SEC31BQ9NQW1 1179 aa26.08■■□□□ 1.77
NCKIPSD-206ENST00000439518 NSFL1CQ9UNZ2 370 aaKnown RBP26.08■■□□□ 1.77
NCKIPSD-206ENST00000439518 GPSM2P81274 684 aa26.07■■□□□ 1.76
NCKIPSD-206ENST00000439518 CNTROBQ8N137 903 aa26.07■■□□□ 1.76
NCKIPSD-206ENST00000439518 GPRC5DQ9NZD1 345 aa26.07■■□□□ 1.76
NCKIPSD-206ENST00000439518 CDHR2Q9BYE9 1310 aa26.07■■□□□ 1.76
NCKIPSD-206ENST00000439518 CCDC152Q4G0S7 254 aa26.06■■□□□ 1.76
NCKIPSD-206ENST00000439518 CIAPIN1Q6FI81 312 aa26.06■■□□□ 1.76
NCKIPSD-206ENST00000439518 USP50Q70EL3 339 aaPredicted RBP26.06■■□□□ 1.76
NCKIPSD-206ENST00000439518 POLLQ9UGP5 575 aa26.06■■□□□ 1.76
NCKIPSD-206ENST00000439518 YDJCA8MPS7 323 aa26.05■■□□□ 1.76
NCKIPSD-206ENST00000439518 VAMP4O75379 141 aa26.05■■□□□ 1.76
NCKIPSD-206ENST00000439518 NEXNQ0ZGT2 675 aa26.05■■□□□ 1.76
NCKIPSD-206ENST00000439518 WASHC4Q2M389 1173 aa26.05■■□□□ 1.76
NCKIPSD-206ENST00000439518 RAD17O75943 681 aa26.04■■□□□ 1.76
NCKIPSD-206ENST00000439518 GMPSP49915 693 aaPredicted RBP26.04■■□□□ 1.76
NCKIPSD-206ENST00000439518 FLIIQ13045 1269 aa26.04■■□□□ 1.76
NCKIPSD-206ENST00000439518 TNIP1Q15025 636 aa26.04■■□□□ 1.76
NCKIPSD-206ENST00000439518 FAM9BQ8IZU0 186 aa26.04■■□□□ 1.76
NCKIPSD-206ENST00000439518 SPINK5Q9NQ38 1064 aaPredicted RBP26.04■■□□□ 1.76
NCKIPSD-206ENST00000439518 NEURL1BA8MQ27 555 aa26.03■■□□□ 1.76
NCKIPSD-206ENST00000439518 C6orf229H3BNL8 230 aa26.03■■□□□ 1.76
NCKIPSD-206ENST00000439518 EXOSC9Q06265 439 aaKnown RBP26.03■■□□□ 1.76
NCKIPSD-206ENST00000439518 CWF19L2Q2TBE0 894 aaKnown RBP26.03■■□□□ 1.76
NCKIPSD-206ENST00000439518 ADARB2Q9NS39 739 aaKnown RBP26.03■■□□□ 1.76
NCKIPSD-206ENST00000439518 PODXL2Q9NZ53 605 aa26.03■■□□□ 1.76
NCKIPSD-206ENST00000439518 TMEM88BA6NKF7 163 aa26.02■■□□□ 1.76
NCKIPSD-206ENST00000439518 TBC1D16Q8TBP0 767 aa26.02■■□□□ 1.76
NCKIPSD-206ENST00000439518 CTSWP56202 376 aa26.01■■□□□ 1.75
NCKIPSD-206ENST00000439518 CCDC85AQ96PX6 553 aaPredicted RBP26.01■■□□□ 1.75
NCKIPSD-206ENST00000439518 MKRN1Q9UHC7 482 aaKnown RBP26.01■■□□□ 1.75
NCKIPSD-206ENST00000439518 CNTNAP1P78357 1384 aa26■■□□□ 1.75
NCKIPSD-206ENST00000439518 H7C1W4 665 aa26■■□□□ 1.75
NCKIPSD-206ENST00000439518 RIMBP2O15034 1052 aa26■■□□□ 1.75
NCKIPSD-206ENST00000439518 EYA3Q99504 573 aa26■■□□□ 1.75
NCKIPSD-206ENST00000439518 IFFO2Q5TF58 517 aa25.99■■□□□ 1.75
NCKIPSD-206ENST00000439518 TTLL11Q8NHH1 800 aa25.99■■□□□ 1.75
NCKIPSD-206ENST00000439518 DBNDD1Q9H9R9 158 aa25.99■■□□□ 1.75
NCKIPSD-206ENST00000439518 FKBP5Q13451 457 aaPredicted RBP25.98■■□□□ 1.75
NCKIPSD-206ENST00000439518 ANKRD18AQ8IVF6 992 aa25.98■■□□□ 1.75
NCKIPSD-206ENST00000439518 GPR101Q96P66 508 aaPredicted RBP25.98■■□□□ 1.75
NCKIPSD-206ENST00000439518 BCL2L13Q9BXK5 485 aa25.98■■□□□ 1.75
NCKIPSD-206ENST00000439518 CACNA1FO60840 1977 aa25.98■■□□□ 1.75
NCKIPSD-206ENST00000439518 RTL9Q8NET4 1388 aa25.97■■□□□ 1.75
NCKIPSD-206ENST00000439518 GCKRQ14397 625 aa25.97■■□□□ 1.75
NCKIPSD-206ENST00000439518 UBE3BQ7Z3V4 1068 aa25.97■■□□□ 1.75
NCKIPSD-206ENST00000439518 DNAAF4Q8WXU2 420 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms