RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 USP27XA6NNY8 438 aa11.73□□□□□ -0.53
CDC42SE1-202ENST00000439374 TIMM10P62072 90 aa11.73□□□□□ -0.53
CDC42SE1-202ENST00000439374 BLOC1S2Q6QNY1 142 aa11.73□□□□□ -0.53
CDC42SE1-202ENST00000439374 FTOQ9C0B1 505 aaKnown RBP eCLIP11.73□□□□□ -0.53
CDC42SE1-202ENST00000439374 PRDM11Q9NQV5 511 aa11.73□□□□□ -0.53
CDC42SE1-202ENST00000439374 KIF13AQ9H1H9 1805 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 F13A1P00488 732 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 ZRSR1Q15695 479 aaKnown RBP11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 RUFY3Q7L099 469 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 PI4K2BQ8TCG2 481 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 ZSWIM4Q9H7M6 989 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 TNNT3P45378 269 aaPredicted RBP11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 UBE2HP62256 183 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 CCT2P78371 535 aaKnown RBP11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 TFCP2Q12800 502 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 MAP3K11Q16584 847 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 WASHC4Q2M389 1173 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 ZNF790Q6PG37 636 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 LMBR1LQ6UX01 489 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 AEBP2Q6ZN18 517 aaPredicted RBP11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 CDC37L1Q7L3B6 337 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 FAM184AQ8NB25 1140 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 ZNF594Q96JF6 807 aaPredicted RBP11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 SPATA32Q96LK8 384 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 OSBPL3Q9H4L5 887 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 HSPA4P34932 840 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 TYRO3Q06418 890 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 EPHA10Q5JZY3 1008 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 HYPKQ9NX55 129 aa11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 ZNF215Q9UL58 517 aaPredicted RBP11.72□□□□□ -0.53
CDC42SE1-202ENST00000439374 GOLIM4O00461 696 aa11.71□□□□□ -0.53
CDC42SE1-202ENST00000439374 ZNF165P49910 485 aa11.71□□□□□ -0.53
CDC42SE1-202ENST00000439374 LARP1Q6PKG0 1096 aaKnown RBP11.71□□□□□ -0.53
CDC42SE1-202ENST00000439374 LINS1Q8NG48 757 aa11.71□□□□□ -0.53
CDC42SE1-202ENST00000439374 A0A0D9SFI3 127 aa11.71□□□□□ -0.54
CDC42SE1-202ENST00000439374 HAND2P61296 217 aa11.71□□□□□ -0.54
CDC42SE1-202ENST00000439374 NCBP1Q09161 790 aaKnown RBP11.71□□□□□ -0.54
CDC42SE1-202ENST00000439374 TAF6LQ9Y6J9 622 aa11.71□□□□□ -0.54
CDC42SE1-202ENST00000439374 KIF24Q5T7B8 1368 aa11.71□□□□□ -0.54
CDC42SE1-202ENST00000439374 USP31Q70CQ4 1352 aa11.71□□□□□ -0.54
CDC42SE1-202ENST00000439374 SMC2O95347 1197 aa11.7□□□□□ -0.54
CDC42SE1-202ENST00000439374 A1BGP04217 495 aa11.7□□□□□ -0.54
CDC42SE1-202ENST00000439374 RIMS1Q86UR5 1692 aaKnown RBP11.7□□□□□ -0.54
CDC42SE1-202ENST00000439374 GPTP24298 496 aa11.7□□□□□ -0.54
CDC42SE1-202ENST00000439374 ERC1Q8IUD2 1116 aa11.7□□□□□ -0.54
CDC42SE1-202ENST00000439374 KIAA1524Q8TCG1 905 aa11.7□□□□□ -0.54
CDC42SE1-202ENST00000439374 DBNDD2Q9BQY9 259 aa11.7□□□□□ -0.54
CDC42SE1-202ENST00000439374 EPC1Q9H2F5 836 aa11.7□□□□□ -0.54
CDC42SE1-202ENST00000439374 HDAC5Q9UQL6 1122 aa11.7□□□□□ -0.54
CDC42SE1-202ENST00000439374 KIF20BQ96Q89 1820 aa11.7□□□□□ -0.54
CDC42SE1-202ENST00000439374 RNF20Q5VTR2 975 aa11.7□□□□□ -0.54
CDC42SE1-202ENST00000439374 CREB3L3Q68CJ9 461 aa11.7□□□□□ -0.54
CDC42SE1-202ENST00000439374 TTLL5Q6EMB2 1281 aa11.7□□□□□ -0.54
CDC42SE1-202ENST00000439374 TTC6Q86TZ1 520 aa11.7□□□□□ -0.54
CDC42SE1-202ENST00000439374 ARHGEF25Q86VW2 580 aa11.7□□□□□ -0.54
CDC42SE1-202ENST00000439374 SASH1O94885 1247 aa11.69□□□□□ -0.54
CDC42SE1-202ENST00000439374 TERF1P54274 439 aa11.69□□□□□ -0.54
CDC42SE1-202ENST00000439374 CREBRFQ8IUR6 639 aa11.69□□□□□ -0.54
CDC42SE1-202ENST00000439374 EVI5LQ96CN4 794 aa11.69□□□□□ -0.54
CDC42SE1-202ENST00000439374 LSG1Q9H089 658 aaKnown RBP11.69□□□□□ -0.54
CDC42SE1-202ENST00000439374 CBX8Q9HC52 389 aa11.69□□□□□ -0.54
CDC42SE1-202ENST00000439374 RAD50Q92878 1312 aa11.69□□□□□ -0.54
CDC42SE1-202ENST00000439374 APPP05067 770 aa11.69□□□□□ -0.54
CDC42SE1-202ENST00000439374 GTF2E1P29083 439 aaPredicted RBP11.69□□□□□ -0.54
CDC42SE1-202ENST00000439374 CACTINQ8WUQ7 758 aaKnown RBP11.69□□□□□ -0.54
CDC42SE1-202ENST00000439374 DDX21Q9NR30 783 aaKnown RBP eCLIP11.69□□□□□ -0.54
CDC42SE1-202ENST00000439374 STAP2Q9UGK3 403 aa11.69□□□□□ -0.54
CDC42SE1-202ENST00000439374 GOLGA8FQ08AF8 430 aa11.69□□□□□ -0.54
CDC42SE1-202ENST00000439374 GOLGA8DPQ0D2H9 430 aa11.69□□□□□ -0.54
CDC42SE1-202ENST00000439374 ME3Q16798 604 aa11.69□□□□□ -0.54
CDC42SE1-202ENST00000439374 CEP135Q66GS9 1140 aa11.69□□□□□ -0.54
CDC42SE1-202ENST00000439374 VIRMAQ69YN4 1812 aaKnown RBP11.68□□□□□ -0.54
CDC42SE1-202ENST00000439374 JAK2O60674 1132 aa11.68□□□□□ -0.54
CDC42SE1-202ENST00000439374 KRT85P78386 507 aa11.68□□□□□ -0.54
CDC42SE1-202ENST00000439374 ZNF589Q86UQ0 364 aaPredicted RBP11.68□□□□□ -0.54
CDC42SE1-202ENST00000439374 TOMM22Q9NS69 142 aa11.68□□□□□ -0.54
CDC42SE1-202ENST00000439374 ATP6V1DQ9Y5K8 247 aa11.68□□□□□ -0.54
CDC42SE1-202ENST00000439374 SPATA31D1Q6ZQQ2 1576 aa11.68□□□□□ -0.54
CDC42SE1-202ENST00000439374 ANAPC15P60006 121 aa11.68□□□□□ -0.54
CDC42SE1-202ENST00000439374 CCDC144BQ3MJ40 725 aa11.68□□□□□ -0.54
CDC42SE1-202ENST00000439374 CCDC144CPQ8IYA2 1237 aa11.68□□□□□ -0.54
CDC42SE1-202ENST00000439374 NR1I2O75469 434 aa11.68□□□□□ -0.54
CDC42SE1-202ENST00000439374 SKILP12757 684 aa11.68□□□□□ -0.54
CDC42SE1-202ENST00000439374 PTPN14Q15678 1187 aa11.68□□□□□ -0.54
CDC42SE1-202ENST00000439374 IFNL2Q8IZJ0 200 aa11.68□□□□□ -0.54
CDC42SE1-202ENST00000439374 CHMP4CQ96CF2 233 aa11.68□□□□□ -0.54
CDC42SE1-202ENST00000439374 CCDC34Q96HJ3 373 aa11.68□□□□□ -0.54
CDC42SE1-202ENST00000439374 IGKV5-2P06315 115 aa11.67□□□□□ -0.54
CDC42SE1-202ENST00000439374 GYS2P54840 703 aa11.67□□□□□ -0.54
CDC42SE1-202ENST00000439374 BRF1Q92994 677 aa11.67□□□□□ -0.54
CDC42SE1-202ENST00000439374 TRIM34Q9BYJ4 488 aa11.67□□□□□ -0.54
CDC42SE1-202ENST00000439374 ADCY9O60503 1353 aa11.67□□□□□ -0.54
CDC42SE1-202ENST00000439374 KDRP35968 1356 aa11.67□□□□□ -0.54
CDC42SE1-202ENST00000439374 TCHHQ07283 1943 aa11.67□□□□□ -0.54
CDC42SE1-202ENST00000439374 TTLL7Q6ZT98 887 aa11.67□□□□□ -0.54
CDC42SE1-202ENST00000439374 NEK11Q8NG66 645 aa11.67□□□□□ -0.54
CDC42SE1-202ENST00000439374 TPCN1Q9ULQ1 816 aa11.67□□□□□ -0.54
CDC42SE1-202ENST00000439374 CCDC171Q6TFL3 1326 aa11.67□□□□□ -0.54
CDC42SE1-202ENST00000439374 LETM1O95202 739 aaPredicted RBP11.66□□□□□ -0.54
CDC42SE1-202ENST00000439374 POLA2Q14181 598 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms