RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 NCAPGQ9BPX3 1015 aa18.48■□□□□ 0.55
DHFR-201ENST00000439211 TFIP11Q9UBB9 837 aaKnown RBP18.48■□□□□ 0.55
DHFR-201ENST00000439211 ZNF330Q9Y3S2 320 aaPredicted RBP18.48■□□□□ 0.55
DHFR-201ENST00000439211 SIRT1Q96EB6 747 aa18.47■□□□□ 0.55
DHFR-201ENST00000439211 USP6P35125 1406 aa18.47■□□□□ 0.55
DHFR-201ENST00000439211 ARHGAP29Q52LW3 1261 aa18.47■□□□□ 0.55
DHFR-201ENST00000439211 SSH3Q8TE77 659 aa18.47■□□□□ 0.55
DHFR-201ENST00000439211 ARHGEF10O15013 1369 aa18.46■□□□□ 0.55
DHFR-201ENST00000439211 UBE2HP62256 183 aa18.46■□□□□ 0.55
DHFR-201ENST00000439211 ZRSR1Q15695 479 aaKnown RBP18.46■□□□□ 0.55
DHFR-201ENST00000439211 BLOC1S2Q6QNY1 142 aa18.46■□□□□ 0.55
DHFR-201ENST00000439211 CKAP2LQ8IYA6 745 aa18.46■□□□□ 0.55
DHFR-201ENST00000439211 IL25Q9H293 177 aa18.46■□□□□ 0.55
DHFR-201ENST00000439211 DBF4Q9UBU7 674 aaPredicted RBP18.46■□□□□ 0.55
DHFR-201ENST00000439211 CUL4AQ13619 759 aa18.46■□□□□ 0.55
DHFR-201ENST00000439211 FBXW7Q969H0 707 aa18.46■□□□□ 0.55
DHFR-201ENST00000439211 PHF8Q9UPP1 1060 aa18.46■□□□□ 0.55
DHFR-201ENST00000439211 KCNA6P17658 529 aa18.46■□□□□ 0.55
DHFR-201ENST00000439211 ERCC6LQ2NKX8 1250 aa18.46■□□□□ 0.55
DHFR-201ENST00000439211 FAM173BQ6P4H8 233 aa18.46■□□□□ 0.55
DHFR-201ENST00000439211 ERC1Q8IUD2 1116 aa18.46■□□□□ 0.55
DHFR-201ENST00000439211 BCCIPQ9P287 314 aaKnown RBP eCLIP18.46■□□□□ 0.55
DHFR-201ENST00000439211 PREX1Q8TCU6 1659 aa18.46■□□□□ 0.55
DHFR-201ENST00000439211 F13A1P00488 732 aa18.45■□□□□ 0.54
DHFR-201ENST00000439211 PSMA5P28066 241 aa18.45■□□□□ 0.54
DHFR-201ENST00000439211 KRT85P78386 507 aa18.45■□□□□ 0.54
DHFR-201ENST00000439211 LUZP1Q86V48 1076 aa18.45■□□□□ 0.54
DHFR-201ENST00000439211 RAD50Q92878 1312 aa18.45■□□□□ 0.54
DHFR-201ENST00000439211 RNF216Q9NWF9 866 aaPredicted RBP18.45■□□□□ 0.54
DHFR-201ENST00000439211 IGSF1Q8N6C5 1336 aa18.45■□□□□ 0.54
DHFR-201ENST00000439211 CCDC34Q96HJ3 373 aa18.44■□□□□ 0.54
DHFR-201ENST00000439211 STAP2Q9UGK3 403 aa18.44■□□□□ 0.54
DHFR-201ENST00000439211 PRR29P0C7W0 189 aa18.44■□□□□ 0.54
DHFR-201ENST00000439211 NLRP2Q9NX02 1062 aa18.44■□□□□ 0.54
DHFR-201ENST00000439211 NRBP1Q9UHY1 535 aa18.44■□□□□ 0.54
DHFR-201ENST00000439211 CRB1P82279 1406 aa18.44■□□□□ 0.54
DHFR-201ENST00000439211 CCDC91Q7Z6B0 441 aa18.44■□□□□ 0.54
DHFR-201ENST00000439211 DDX11Q96FC9 970 aa18.43■□□□□ 0.54
DHFR-201ENST00000439211 PPFIA3O75145 1194 aa18.43■□□□□ 0.54
DHFR-201ENST00000439211 MAP3K11Q16584 847 aa18.43■□□□□ 0.54
DHFR-201ENST00000439211 ZSCAN31Q96LW9 406 aaPredicted RBP18.43■□□□□ 0.54
DHFR-201ENST00000439211 RBM8AQ9Y5S9 174 aaKnown RBP18.43■□□□□ 0.54
DHFR-201ENST00000439211 FAM200AQ8TCP9 573 aa18.43■□□□□ 0.54
DHFR-201ENST00000439211 NEUROD6Q96NK8 337 aa18.43■□□□□ 0.54
DHFR-201ENST00000439211 RRP15Q9Y3B9 282 aaKnown RBP18.43■□□□□ 0.54
DHFR-201ENST00000439211 NBPF6Q5VWK0 638 aa18.43■□□□□ 0.54
DHFR-201ENST00000439211 NBPF4Q96M43 638 aa18.43■□□□□ 0.54
DHFR-201ENST00000439211 PTH1RQ03431 593 aa18.42■□□□□ 0.54
DHFR-201ENST00000439211 RUFY3Q7L099 469 aa18.42■□□□□ 0.54
DHFR-201ENST00000439211 NUP62CLQ9H1M0 184 aa18.42■□□□□ 0.54
DHFR-201ENST00000439211 TNMDQ9H2S6 317 aa18.42■□□□□ 0.54
DHFR-201ENST00000439211 RGS12O14924 1447 aa18.42■□□□□ 0.54
DHFR-201ENST00000439211 SKILP12757 684 aa18.42■□□□□ 0.54
DHFR-201ENST00000439211 PDCP20941 246 aa18.42■□□□□ 0.54
DHFR-201ENST00000439211 MNAT1P51948 309 aa18.42■□□□□ 0.54
DHFR-201ENST00000439211 KLHDC4Q8TBB5 520 aa18.42■□□□□ 0.54
DHFR-201ENST00000439211 CLTCQ00610 1675 aaKnown RBP18.42■□□□□ 0.54
DHFR-201ENST00000439211 CCDC171Q6TFL3 1326 aa18.41■□□□□ 0.54
DHFR-201ENST00000439211 KIF20BQ96Q89 1820 aa18.41■□□□□ 0.54
DHFR-201ENST00000439211 ZC3H6P61129 1189 aaKnown RBP18.41■□□□□ 0.54
DHFR-201ENST00000439211 SETQ01105 290 aaPredicted RBP18.41■□□□□ 0.54
DHFR-201ENST00000439211 FAM227BQ96M60 508 aa18.41■□□□□ 0.54
DHFR-201ENST00000439211 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.41■□□□□ 0.54
DHFR-201ENST00000439211 PIP4K2AP48426 406 aaPredicted RBP18.41■□□□□ 0.54
DHFR-201ENST00000439211 SYTL4Q96C24 671 aaPredicted RBP18.41■□□□□ 0.54
DHFR-201ENST00000439211 EVI5LQ96CN4 794 aa18.41■□□□□ 0.54
DHFR-201ENST00000439211 SPATA32Q96LK8 384 aa18.41■□□□□ 0.54
DHFR-201ENST00000439211 EIF4A1P60842 406 aaKnown RBP18.41■□□□□ 0.54
DHFR-201ENST00000439211 ADCK5Q3MIX3 580 aa18.41■□□□□ 0.54
DHFR-201ENST00000439211 RAPGEF4Q8WZA2 1011 aa18.41■□□□□ 0.54
DHFR-201ENST00000439211 RBM6P78332 1123 aaKnown RBP18.4■□□□□ 0.54
DHFR-201ENST00000439211 ZSCAN25Q6NSZ9 544 aa18.4■□□□□ 0.54
DHFR-201ENST00000439211 BRMS1Q9HCU9 246 aa18.4■□□□□ 0.54
DHFR-201ENST00000439211 SH2B1Q9NRF2 756 aaPredicted RBP18.4■□□□□ 0.54
DHFR-201ENST00000439211 SLC39A6Q13433 755 aa18.4■□□□□ 0.54
DHFR-201ENST00000439211 CEP83Q9Y592 693 aa18.4■□□□□ 0.54
DHFR-201ENST00000439211 NMIQ13287 307 aaPredicted RBP18.39■□□□□ 0.53
DHFR-201ENST00000439211 TTC5Q8N0Z6 440 aa18.39■□□□□ 0.53
DHFR-201ENST00000439211 HIP1O00291 1037 aa18.39■□□□□ 0.53
DHFR-201ENST00000439211 LARGE1O95461 756 aa18.39■□□□□ 0.53
DHFR-201ENST00000439211 OAS2P29728 719 aaKnown RBP18.39■□□□□ 0.53
DHFR-201ENST00000439211 ZCCHC17Q9NP64 241 aaKnown RBP18.39■□□□□ 0.53
DHFR-201ENST00000439211 ANKLE2Q86XL3 938 aa18.39■□□□□ 0.53
DHFR-201ENST00000439211 ANKRD20A12PQ8NF67 263 aa18.39■□□□□ 0.53
DHFR-201ENST00000439211 PI4K2BQ8TCG2 481 aa18.39■□□□□ 0.53
DHFR-201ENST00000439211 TBX22Q9Y458 520 aa18.39■□□□□ 0.53
DHFR-201ENST00000439211 LSG1Q9H089 658 aaKnown RBP18.38■□□□□ 0.53
DHFR-201ENST00000439211 CCDC172P0C7W6 258 aa18.38■□□□□ 0.53
DHFR-201ENST00000439211 SNW1Q13573 536 aaKnown RBP18.38■□□□□ 0.53
DHFR-201ENST00000439211 BEND3Q5T5X7 828 aa18.38■□□□□ 0.53
DHFR-201ENST00000439211 FAM177A1Q8N128 213 aaPredicted RBP18.38■□□□□ 0.53
DHFR-201ENST00000439211 ANO6Q4KMQ2 910 aa18.37■□□□□ 0.53
DHFR-201ENST00000439211 CREB3L3Q68CJ9 461 aa18.37■□□□□ 0.53
DHFR-201ENST00000439211 MYD88Q99836 296 aa18.37■□□□□ 0.53
DHFR-201ENST00000439211 URI1O94763 535 aaPredicted RBP18.37■□□□□ 0.53
DHFR-201ENST00000439211 PNMA6AP0CW24 399 aaPredicted RBP18.37■□□□□ 0.53
DHFR-201ENST00000439211 GUCY2CP25092 1073 aa18.37■□□□□ 0.53
DHFR-201ENST00000439211 ZNF526Q8TF50 670 aaPredicted RBP18.37■□□□□ 0.53
DHFR-201ENST00000439211 LRRC2Q9BYS8 371 aa18.37■□□□□ 0.53
DHFR-201ENST00000439211 RICTORQ6R327 1708 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms