RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 RARAP10276 462 aa6.55□□□□□ -1.36
LSM1P1-201ENST00000438629 ARAFP10398 606 aa6.55□□□□□ -1.36
LSM1P1-201ENST00000438629 SRSF11Q05519 484 aaKnown RBP6.55□□□□□ -1.36
LSM1P1-201ENST00000438629 GAS6Q14393 721 aa6.55□□□□□ -1.36
LSM1P1-201ENST00000438629 ZNF468Q5VIY5 522 aaPredicted RBP6.55□□□□□ -1.36
LSM1P1-201ENST00000438629 SNX29Q8TEQ0 813 aa6.55□□□□□ -1.36
LSM1P1-201ENST00000438629 BHMTQ93088 406 aa6.55□□□□□ -1.36
LSM1P1-201ENST00000438629 SLC30A3Q99726 388 aa6.55□□□□□ -1.36
LSM1P1-201ENST00000438629 NIF3L1Q9GZT8 377 aa6.55□□□□□ -1.36
LSM1P1-201ENST00000438629 DNAJC25Q9H1X3 360 aa6.55□□□□□ -1.36
LSM1P1-201ENST00000438629 SIN3BO75182 1162 aa6.54□□□□□ -1.36
LSM1P1-201ENST00000438629 NFKB1P19838 968 aa6.54□□□□□ -1.36
LSM1P1-201ENST00000438629 TARSP26639 723 aaKnown RBP6.54□□□□□ -1.36
LSM1P1-201ENST00000438629 ADH6P28332 368 aa6.54□□□□□ -1.36
LSM1P1-201ENST00000438629 DSC3Q14574 896 aa6.54□□□□□ -1.36
LSM1P1-201ENST00000438629 KRT25Q7Z3Z0 450 aa6.54□□□□□ -1.36
LSM1P1-201ENST00000438629 SYT9Q86SS6 491 aa6.54□□□□□ -1.36
LSM1P1-201ENST00000438629 BCL11AQ9H165 835 aa6.54□□□□□ -1.36
LSM1P1-201ENST00000438629 TLR7Q9NYK1 1049 aaKnown RBP6.54□□□□□ -1.36
LSM1P1-201ENST00000438629 PHF20L1A8MW92 1017 aa6.53□□□□□ -1.36
LSM1P1-201ENST00000438629 C2CD2LO14523 706 aa6.53□□□□□ -1.36
LSM1P1-201ENST00000438629 PHACTR2O75167 634 aa6.53□□□□□ -1.36
LSM1P1-201ENST00000438629 TNFRSF21O75509 655 aa6.53□□□□□ -1.36
LSM1P1-201ENST00000438629 SOX18P35713 384 aa6.53□□□□□ -1.36
LSM1P1-201ENST00000438629 GOLGA6L1Q8N7Z2 621 aa6.53□□□□□ -1.36
LSM1P1-201ENST00000438629 GDF2Q9UK05 429 aaPredicted RBP6.53□□□□□ -1.36
LSM1P1-201ENST00000438629 AMOTL2Q9Y2J4 779 aa6.53□□□□□ -1.36
LSM1P1-201ENST00000438629 IGF1RP08069 1367 aa6.53□□□□□ -1.36
LSM1P1-201ENST00000438629 ERBB4Q15303 1308 aa6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 GPR182O15218 404 aa6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 MMP20O60882 483 aa6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 CPNE3O75131 537 aaKnown RBP6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 IGHA2P01877 340 aa6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 CES1P23141 567 aa6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 ITGAEP38570 1179 aa6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 NRLP54845 237 aa6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 ATP2B2Q01814 1243 aa6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 PLAURQ03405 335 aa6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 FMR1Q06787 632 aaKnown RBP eCLIP6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 EAPPQ56P03 285 aaPredicted RBP6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 TREML4Q6UXN2 200 aa6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 OR13H1Q8NG92 308 aa6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 ZNF775Q96BV0 537 aaPredicted RBP6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 CSRNP1Q96S65 589 aa6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 ZFYVE28Q9HCC9 887 aa6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 HCN2Q9UL51 889 aa6.52□□□□□ -1.37
LSM1P1-201ENST00000438629 A6NHS1 94 aa6.51□□□□□ -1.37
LSM1P1-201ENST00000438629 HOXD8P13378 290 aaPredicted RBP6.51□□□□□ -1.37
LSM1P1-201ENST00000438629 ALAS2P22557 587 aa6.51□□□□□ -1.37
LSM1P1-201ENST00000438629 HYAL2Q12891 473 aa6.51□□□□□ -1.37
LSM1P1-201ENST00000438629 GRIN2CQ14957 1233 aa6.51□□□□□ -1.37
LSM1P1-201ENST00000438629 ZNF326Q5BKZ1 582 aaKnown RBP6.51□□□□□ -1.37
LSM1P1-201ENST00000438629 ALG1LQ6GMV1 187 aa6.51□□□□□ -1.37
LSM1P1-201ENST00000438629 DHX32Q7L7V1 743 aaKnown RBP6.51□□□□□ -1.37
LSM1P1-201ENST00000438629 NPAS4Q8IUM7 802 aa6.51□□□□□ -1.37
LSM1P1-201ENST00000438629 RGS22Q8NE09 1264 aa6.51□□□□□ -1.37
LSM1P1-201ENST00000438629 TNFRSF25Q93038 417 aa6.51□□□□□ -1.37
LSM1P1-201ENST00000438629 CNTNAP3BQ96NU0 1288 aa6.51□□□□□ -1.37
LSM1P1-201ENST00000438629 OXCT2Q9BYC2 517 aaPredicted RBP6.51□□□□□ -1.37
LSM1P1-201ENST00000438629 CNTNAP3Q9BZ76 1288 aa6.51□□□□□ -1.37
LSM1P1-201ENST00000438629 TMEM63CQ9P1W3 806 aa6.51□□□□□ -1.37
LSM1P1-201ENST00000438629 ZFATQ9P243 1243 aa6.51□□□□□ -1.37
LSM1P1-201ENST00000438629 ADARB2-AS1A8MUL3 147 aa6.5□□□□□ -1.37
LSM1P1-201ENST00000438629 EIF1AYO14602 144 aaKnown RBP6.5□□□□□ -1.37
LSM1P1-201ENST00000438629 MAPK8P45983 427 aa6.5□□□□□ -1.37
LSM1P1-201ENST00000438629 PCBP4P57723 403 aaKnown RBP6.5□□□□□ -1.37
LSM1P1-201ENST00000438629 RNFT1Q5M7Z0 435 aa6.5□□□□□ -1.37
LSM1P1-201ENST00000438629 C1orf127Q8N9H9 656 aa6.5□□□□□ -1.37
LSM1P1-201ENST00000438629 TRPM4Q8TD43 1214 aa6.5□□□□□ -1.37
LSM1P1-201ENST00000438629 FBF1Q8TES7 1133 aa6.5□□□□□ -1.37
LSM1P1-201ENST00000438629 SPACA7Q96KW9 195 aa6.5□□□□□ -1.37
LSM1P1-201ENST00000438629 UBE2OQ9C0C9 1292 aaKnown RBP6.5□□□□□ -1.37
LSM1P1-201ENST00000438629 RBSNQ9H1K0 784 aa6.5□□□□□ -1.37
LSM1P1-201ENST00000438629 LRRC4BQ9NT99 713 aa6.5□□□□□ -1.37
LSM1P1-201ENST00000438629 NEURL1BA8MQ27 555 aa6.49□□□□□ -1.37
LSM1P1-201ENST00000438629 ADAMTS2O95450 1211 aa6.49□□□□□ -1.37
LSM1P1-201ENST00000438629 EDN3P14138 238 aa6.49□□□□□ -1.37
LSM1P1-201ENST00000438629 GMPRP36959 345 aa6.49□□□□□ -1.37
LSM1P1-201ENST00000438629 GPLD1P80108 840 aa6.49□□□□□ -1.37
LSM1P1-201ENST00000438629 ENOX2Q16206 610 aaKnown RBP6.49□□□□□ -1.37
LSM1P1-201ENST00000438629 RAB44Q7Z6P3 723 aaPredicted RBP6.49□□□□□ -1.37
LSM1P1-201ENST00000438629 FRMD6Q96NE9 622 aa6.49□□□□□ -1.37
LSM1P1-201ENST00000438629 BCL2L13Q9BXK5 485 aa6.49□□□□□ -1.37
LSM1P1-201ENST00000438629 IGFLR1Q9H665 355 aa6.49□□□□□ -1.37
LSM1P1-201ENST00000438629 CNTN3Q9P232 1028 aa6.49□□□□□ -1.37
LSM1P1-201ENST00000438629 FOXD3Q9UJU5 478 aaPredicted RBP6.49□□□□□ -1.37
LSM1P1-201ENST00000438629 GGA1Q9UJY5 639 aa6.49□□□□□ -1.37
LSM1P1-201ENST00000438629 ELOA3CA0A087WX78 387 aaPredicted RBP6.48□□□□□ -1.37
LSM1P1-201ENST00000438629 LOC102724428A0A0B4J2F2 783 aa6.48□□□□□ -1.37
LSM1P1-201ENST00000438629 ELOA3DA6NLF2 546 aaPredicted RBP6.48□□□□□ -1.37
LSM1P1-201ENST00000438629 LDHBP07195 334 aaKnown RBP6.48□□□□□ -1.37
LSM1P1-201ENST00000438629 P4HBP07237 508 aaKnown RBP6.48□□□□□ -1.37
LSM1P1-201ENST00000438629 SLURP2P0DP57 97 aa6.48□□□□□ -1.37
LSM1P1-201ENST00000438629 SIK1P57059 783 aa6.48□□□□□ -1.37
LSM1P1-201ENST00000438629 ORC1Q13415 861 aa6.48□□□□□ -1.37
LSM1P1-201ENST00000438629 ELOA3BQ3SY89 546 aa6.48□□□□□ -1.37
LSM1P1-201ENST00000438629 SLCO4C1Q6ZQN7 724 aa6.48□□□□□ -1.37
LSM1P1-201ENST00000438629 ELOA3Q8NG57 546 aa6.48□□□□□ -1.37
LSM1P1-201ENST00000438629 DNAJB12Q9NXW2 375 aaKnown RBP6.48□□□□□ -1.37
LSM1P1-201ENST00000438629 PNMA6FA0A0J9YX94 578 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms