RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 H7C1W4 665 aa12.2□□□□□ -0.46
CUBN-204ENST00000438254 GRM8O00222 908 aa12.2□□□□□ -0.46
CUBN-204ENST00000438254 SSFA2P28290 1259 aa12.2□□□□□ -0.46
CUBN-204ENST00000438254 HSP90AB3PQ58FF7 597 aa12.2□□□□□ -0.46
CUBN-204ENST00000438254 B4GALNT3Q6L9W6 998 aa12.2□□□□□ -0.46
CUBN-204ENST00000438254 CLEC4GQ6UXB4 293 aa12.2□□□□□ -0.46
CUBN-204ENST00000438254 KAZALD1Q96I82 304 aa12.2□□□□□ -0.46
CUBN-204ENST00000438254 AK7Q96M32 723 aa12.2□□□□□ -0.46
CUBN-204ENST00000438254 COL24A1Q17RW2 1714 aa12.2□□□□□ -0.46
CUBN-204ENST00000438254 IGHDP01880 384 aa12.19□□□□□ -0.46
CUBN-204ENST00000438254 BAG6P46379 1132 aa12.19□□□□□ -0.46
CUBN-204ENST00000438254 HDAC1Q13547 482 aaPredicted RBP12.19□□□□□ -0.46
CUBN-204ENST00000438254 CEP85Q6P2H3 762 aa12.19□□□□□ -0.46
CUBN-204ENST00000438254 DEFB132Q7Z7B7 95 aa12.19□□□□□ -0.46
CUBN-204ENST00000438254 NLRP10Q86W26 655 aa12.19□□□□□ -0.46
CUBN-204ENST00000438254 MARVELD3Q96A59 401 aa12.19□□□□□ -0.46
CUBN-204ENST00000438254 C1orf115Q9H7X2 142 aa12.19□□□□□ -0.46
CUBN-204ENST00000438254 CWC25Q9NXE8 425 aaPredicted RBP12.19□□□□□ -0.46
CUBN-204ENST00000438254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.18□□□□□ -0.46
CUBN-204ENST00000438254 GNAI2P04899 355 aa12.18□□□□□ -0.46
CUBN-204ENST00000438254 UBTFL1P0CB47 393 aaPredicted RBP12.18□□□□□ -0.46
CUBN-204ENST00000438254 PSEN1P49768 467 aa12.18□□□□□ -0.46
CUBN-204ENST00000438254 MTX1Q13505 466 aa12.18□□□□□ -0.46
CUBN-204ENST00000438254 TRAPPC3LQ5T215 181 aa12.18□□□□□ -0.46
CUBN-204ENST00000438254 NPM2Q86SE8 214 aaKnown RBP12.18□□□□□ -0.46
CUBN-204ENST00000438254 ANKRD44Q8N8A2 993 aa12.18□□□□□ -0.46
CUBN-204ENST00000438254 CCDC136Q96JN2 1154 aa12.18□□□□□ -0.46
CUBN-204ENST00000438254 ANO8Q9HCE9 1232 aaPredicted RBP12.18□□□□□ -0.46
CUBN-204ENST00000438254 LRRFIP2Q9Y608 721 aaKnown RBP12.18□□□□□ -0.46
CUBN-204ENST00000438254 USPL1Q5W0Q7 1092 aa12.17□□□□□ -0.46
CUBN-204ENST00000438254 RPAP2Q8IXW5 612 aaPredicted RBP12.17□□□□□ -0.46
CUBN-204ENST00000438254 SUCLG2Q96I99 432 aa12.17□□□□□ -0.46
CUBN-204ENST00000438254 SRP68Q9UHB9 627 aaKnown RBP12.17□□□□□ -0.46
CUBN-204ENST00000438254 PNPLA7Q6ZV29 1317 aa12.16□□□□□ -0.46
CUBN-204ENST00000438254 PCCAP05165 728 aaPredicted RBP12.16□□□□□ -0.46
CUBN-204ENST00000438254 SF3B2Q13435 895 aaKnown RBP12.16□□□□□ -0.46
CUBN-204ENST00000438254 RABL6Q3YEC7 729 aaPredicted RBP12.16□□□□□ -0.46
CUBN-204ENST00000438254 ZBTB38Q8NAP3 1195 aaPredicted RBP12.16□□□□□ -0.46
CUBN-204ENST00000438254 C9orf78Q9NZ63 289 aaPredicted RBP12.16□□□□□ -0.46
CUBN-204ENST00000438254 ZNF652Q9Y2D9 606 aa12.16□□□□□ -0.46
CUBN-204ENST00000438254 CDHR2Q9BYE9 1310 aa12.15□□□□□ -0.46
CUBN-204ENST00000438254 PHF14O94880 888 aa12.15□□□□□ -0.46
CUBN-204ENST00000438254 GYS1P13807 737 aa12.15□□□□□ -0.46
CUBN-204ENST00000438254 GPTP24298 496 aa12.15□□□□□ -0.46
CUBN-204ENST00000438254 ATP8B2P98198 1209 aa12.15□□□□□ -0.46
CUBN-204ENST00000438254 PARP10Q53GL7 1025 aa12.15□□□□□ -0.46
CUBN-204ENST00000438254 EPHA10Q5JZY3 1008 aa12.15□□□□□ -0.46
CUBN-204ENST00000438254 SUSD4Q5VX71 490 aa12.15□□□□□ -0.46
CUBN-204ENST00000438254 TBC1D9BQ66K14 1250 aa12.15□□□□□ -0.46
CUBN-204ENST00000438254 UBE3BQ7Z3V4 1068 aa12.15□□□□□ -0.46
CUBN-204ENST00000438254 COL23A1Q86Y22 540 aaPredicted RBP12.15□□□□□ -0.46
CUBN-204ENST00000438254 UPF1Q92900 1129 aaKnown RBP eCLIP12.15□□□□□ -0.46
CUBN-204ENST00000438254 ARXQ96QS3 562 aa12.15□□□□□ -0.46
CUBN-204ENST00000438254 PLA2G12BQ9BX93 195 aa12.15□□□□□ -0.46
CUBN-204ENST00000438254 LAMB2P55268 1798 aa12.15□□□□□ -0.46
CUBN-204ENST00000438254 PNMA6EA0A0J9YXQ4 647 aa12.14□□□□□ -0.47
CUBN-204ENST00000438254 ZPR1O75312 459 aa12.14□□□□□ -0.47
CUBN-204ENST00000438254 NTSR2O95665 410 aa12.14□□□□□ -0.47
CUBN-204ENST00000438254 RFC4P35249 363 aa12.14□□□□□ -0.47
CUBN-204ENST00000438254 EMP3P54852 163 aa12.14□□□□□ -0.47
CUBN-204ENST00000438254 FOXO4P98177 505 aa12.14□□□□□ -0.47
CUBN-204ENST00000438254 SLC15A2Q16348 729 aa12.14□□□□□ -0.47
CUBN-204ENST00000438254 CENPQQ7L2Z9 268 aaPredicted RBP12.14□□□□□ -0.47
CUBN-204ENST00000438254 SMC5Q8IY18 1101 aa12.14□□□□□ -0.47
CUBN-204ENST00000438254 FLAD1Q8NFF5 587 aa12.14□□□□□ -0.47
CUBN-204ENST00000438254 SSH3Q8TE77 659 aa12.14□□□□□ -0.47
CUBN-204ENST00000438254 BICC1Q9H694 974 aaKnown RBP12.14□□□□□ -0.47
CUBN-204ENST00000438254 HDAC5Q9UQL6 1122 aa12.14□□□□□ -0.47
CUBN-204ENST00000438254 NIP7Q9Y221 180 aaKnown RBP eCLIP12.14□□□□□ -0.47
CUBN-204ENST00000438254 DDX60Q8IY21 1712 aaKnown RBP12.14□□□□□ -0.47
CUBN-204ENST00000438254 SYNE4Q8N205 404 aa12.13□□□□□ -0.47
CUBN-204ENST00000438254 JARID2Q92833 1246 aaPredicted RBP12.13□□□□□ -0.47
CUBN-204ENST00000438254 RWDD1Q9H446 243 aaPredicted RBP12.13□□□□□ -0.47
CUBN-204ENST00000438254 TFCP2L1Q9NZI6 479 aa12.13□□□□□ -0.47
CUBN-204ENST00000438254 TM4SF1P30408 202 aa12.12□□□□□ -0.47
CUBN-204ENST00000438254 PDAP1Q13442 181 aaKnown RBP12.12□□□□□ -0.47
CUBN-204ENST00000438254 NFIXQ14938 502 aa12.12□□□□□ -0.47
CUBN-204ENST00000438254 PPP1R42Q7Z4L9 355 aa12.12□□□□□ -0.47
CUBN-204ENST00000438254 FAM89AQ96GI7 184 aa12.12□□□□□ -0.47
CUBN-204ENST00000438254 DCTPP1Q9H773 170 aa12.12□□□□□ -0.47
CUBN-204ENST00000438254 NRXN2Q9P2S2 1712 aa12.11□□□□□ -0.47
CUBN-204ENST00000438254 CSF1RP07333 972 aa12.11□□□□□ -0.47
CUBN-204ENST00000438254 RFX5P48382 616 aaPredicted RBP12.11□□□□□ -0.47
CUBN-204ENST00000438254 SLC10A5Q5PT55 438 aa12.11□□□□□ -0.47
CUBN-204ENST00000438254 UTP14AQ9BVJ6 771 aaKnown RBP12.11□□□□□ -0.47
CUBN-204ENST00000438254 STK32BQ9NY57 414 aa12.11□□□□□ -0.47
CUBN-204ENST00000438254 TRMT112Q9UI30 125 aaKnown RBP12.11□□□□□ -0.47
CUBN-204ENST00000438254 RIC1Q4ADV7 1423 aa12.11□□□□□ -0.47
CUBN-204ENST00000438254 SH3TC1Q8TE82 1336 aa12.11□□□□□ -0.47
CUBN-204ENST00000438254 CARMIL3Q8ND23 1372 aa12.1□□□□□ -0.47
CUBN-204ENST00000438254 ABCC12Q96J65 1359 aa12.1□□□□□ -0.47
CUBN-204ENST00000438254 NOP58Q9Y2X3 529 aaKnown RBP12.1□□□□□ -0.47
CUBN-204ENST00000438254 MYH3P11055 1940 aa12.09□□□□□ -0.47
CUBN-204ENST00000438254 IRS4O14654 1257 aaPredicted RBP12.09□□□□□ -0.47
CUBN-204ENST00000438254 SRGAP3O43295 1099 aa12.09□□□□□ -0.47
CUBN-204ENST00000438254 PDE8AO60658 829 aa12.09□□□□□ -0.47
CUBN-204ENST00000438254 HMMRO75330 724 aa12.09□□□□□ -0.47
CUBN-204ENST00000438254 DDR1Q08345 913 aa12.09□□□□□ -0.47
CUBN-204ENST00000438254 RTL5Q5HYW3 569 aaPredicted RBP12.09□□□□□ -0.47
CUBN-204ENST00000438254 ILDR2Q71H61 639 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms