RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 PLBD2Q8NHP8 589 aa11.05□□□□□ -0.64
HERPUD2-206ENST00000438224 CNKSR1Q969H4 720 aa11.05□□□□□ -0.64
HERPUD2-206ENST00000438224 ISCA1Q9BUE6 129 aa11.05□□□□□ -0.64
HERPUD2-206ENST00000438224 NYXQ9GZU5 481 aa11.05□□□□□ -0.64
HERPUD2-206ENST00000438224 HYPKQ9NX55 129 aa11.05□□□□□ -0.64
HERPUD2-206ENST00000438224 RNF181Q9P0P0 153 aa11.05□□□□□ -0.64
HERPUD2-206ENST00000438224 ZNF521Q96K83 1311 aa11.05□□□□□ -0.64
HERPUD2-206ENST00000438224 LRRC37AA6NMS7 1700 aa11.04□□□□□ -0.64
HERPUD2-206ENST00000438224 GTF2E1P29083 439 aaPredicted RBP11.04□□□□□ -0.64
HERPUD2-206ENST00000438224 MNX1P50219 401 aaPredicted RBP11.04□□□□□ -0.64
HERPUD2-206ENST00000438224 ANKRD13DQ6ZTN6 518 aa11.04□□□□□ -0.64
HERPUD2-206ENST00000438224 COL4A5P29400 1685 aa11.04□□□□□ -0.64
HERPUD2-206ENST00000438224 SPEF2Q9C093 1822 aa11.03□□□□□ -0.64
HERPUD2-206ENST00000438224 ATP5J2-PTCD1G3V325 749 aa11.03□□□□□ -0.64
HERPUD2-206ENST00000438224 KIF3CO14782 793 aa11.03□□□□□ -0.64
HERPUD2-206ENST00000438224 HCLS1P14317 486 aaPredicted RBP11.03□□□□□ -0.64
HERPUD2-206ENST00000438224 EVX2Q03828 476 aa11.03□□□□□ -0.64
HERPUD2-206ENST00000438224 TWISTNBQ3B726 338 aaPredicted RBP11.03□□□□□ -0.64
HERPUD2-206ENST00000438224 SLC10A5Q5PT55 438 aa11.03□□□□□ -0.64
HERPUD2-206ENST00000438224 G2E3Q7L622 706 aa11.03□□□□□ -0.64
HERPUD2-206ENST00000438224 PPP1R42Q7Z4L9 355 aa11.03□□□□□ -0.64
HERPUD2-206ENST00000438224 WDR63Q8IWG1 891 aa11.03□□□□□ -0.64
HERPUD2-206ENST00000438224 SPDYE1Q8NFV5 336 aaPredicted RBP11.03□□□□□ -0.64
HERPUD2-206ENST00000438224 UTP14AQ9BVJ6 771 aaKnown RBP11.03□□□□□ -0.64
HERPUD2-206ENST00000438224 GPBP1L1Q9HC44 474 aaPredicted RBP11.03□□□□□ -0.64
HERPUD2-206ENST00000438224 NMRK2Q9NPI5 230 aa11.03□□□□□ -0.64
HERPUD2-206ENST00000438224 CREBZFQ9NS37 354 aa11.03□□□□□ -0.64
HERPUD2-206ENST00000438224 CLEC11AQ9Y240 323 aa11.03□□□□□ -0.64
HERPUD2-206ENST00000438224 LTBP3Q9NS15 1303 aa11.03□□□□□ -0.64
HERPUD2-206ENST00000438224 LMNB1P20700 586 aa11.02□□□□□ -0.65
HERPUD2-206ENST00000438224 HOXA10P31260 410 aaPredicted RBP11.02□□□□□ -0.65
HERPUD2-206ENST00000438224 EXOSC9Q06265 439 aaKnown RBP11.02□□□□□ -0.65
HERPUD2-206ENST00000438224 HSP90AB3PQ58FF7 597 aa11.02□□□□□ -0.65
HERPUD2-206ENST00000438224 CCDC30Q5VVM6 783 aa11.02□□□□□ -0.65
HERPUD2-206ENST00000438224 E2F4Q16254 413 aa11.01□□□□□ -0.65
HERPUD2-206ENST00000438224 TRMT112Q9UI30 125 aaKnown RBP11.01□□□□□ -0.65
HERPUD2-206ENST00000438224 RNF123Q5XPI4 1314 aa11.01□□□□□ -0.65
HERPUD2-206ENST00000438224 LTBP1Q14766 1721 aa11.01□□□□□ -0.65
HERPUD2-206ENST00000438224 WDR90Q96KV7 1748 aa11.01□□□□□ -0.65
HERPUD2-206ENST00000438224 DUOX1Q9NRD9 1551 aa11□□□□□ -0.65
HERPUD2-206ENST00000438224 SEMA3EO15041 775 aa11□□□□□ -0.65
HERPUD2-206ENST00000438224 VAMP4O75379 141 aa11□□□□□ -0.65
HERPUD2-206ENST00000438224 ZMYND10O75800 440 aa11□□□□□ -0.65
HERPUD2-206ENST00000438224 C1QTNF8P60827 252 aa11□□□□□ -0.65
HERPUD2-206ENST00000438224 GOLGA2Q08379 1002 aa11□□□□□ -0.65
HERPUD2-206ENST00000438224 TRIM28Q13263 835 aaKnown RBP11□□□□□ -0.65
HERPUD2-206ENST00000438224 CCDC93Q567U6 631 aa11□□□□□ -0.65
HERPUD2-206ENST00000438224 RIC3Q7Z5B4 369 aa11□□□□□ -0.65
HERPUD2-206ENST00000438224 RPGRQ92834 1020 aaKnown RBP11□□□□□ -0.65
HERPUD2-206ENST00000438224 FAM89AQ96GI7 184 aa11□□□□□ -0.65
HERPUD2-206ENST00000438224 CRAMP1Q96RY5 1269 aa11□□□□□ -0.65
HERPUD2-206ENST00000438224 MYD88Q99836 296 aa11□□□□□ -0.65
HERPUD2-206ENST00000438224 TAOK3Q9H2K8 898 aa11□□□□□ -0.65
HERPUD2-206ENST00000438224 ABCC4O15439 1325 aa11□□□□□ -0.65
HERPUD2-206ENST00000438224 SH3TC1Q8TE82 1336 aa11□□□□□ -0.65
HERPUD2-206ENST00000438224 PRKAR2AP13861 404 aaKnown RBP10.99□□□□□ -0.65
HERPUD2-206ENST00000438224 RTL5Q5HYW3 569 aaPredicted RBP10.99□□□□□ -0.65
HERPUD2-206ENST00000438224 JARID2Q92833 1246 aaPredicted RBP10.99□□□□□ -0.65
HERPUD2-206ENST00000438224 NLRP3Q96P20 1036 aa10.99□□□□□ -0.65
HERPUD2-206ENST00000438224 MAP3K2Q9Y2U5 619 aa10.99□□□□□ -0.65
HERPUD2-206ENST00000438224 CEP350Q5VT06 3117 aa10.98□□□□□ -0.65
HERPUD2-206ENST00000438224 PI4KAP2A4QPH2 592 aa10.98□□□□□ -0.65
HERPUD2-206ENST00000438224 CCER2I3L3R5 266 aa10.98□□□□□ -0.65
HERPUD2-206ENST00000438224 IGKV5-2P06315 115 aa10.98□□□□□ -0.65
HERPUD2-206ENST00000438224 ALDH1B1P30837 517 aa10.98□□□□□ -0.65
HERPUD2-206ENST00000438224 FKBP4Q02790 459 aaKnown RBP eCLIP10.98□□□□□ -0.65
HERPUD2-206ENST00000438224 PI4KAP1Q8N8J0 262 aa10.98□□□□□ -0.65
HERPUD2-206ENST00000438224 METTL22Q9BUU2 404 aaPredicted RBP10.98□□□□□ -0.65
HERPUD2-206ENST00000438224 ZNF277Q9NRM2 450 aaPredicted RBP10.98□□□□□ -0.65
HERPUD2-206ENST00000438224 ZC3H4Q9UPT8 1303 aaKnown RBP10.98□□□□□ -0.65
HERPUD2-206ENST00000438224 POTECB2RU33 542 aa10.97□□□□□ -0.65
HERPUD2-206ENST00000438224 PPEF1O14829 653 aaPredicted RBP10.97□□□□□ -0.65
HERPUD2-206ENST00000438224 FLIIQ13045 1269 aa10.97□□□□□ -0.65
HERPUD2-206ENST00000438224 SOGA3Q5TF21 947 aa10.97□□□□□ -0.65
HERPUD2-206ENST00000438224 IFFO2Q5TF58 517 aa10.97□□□□□ -0.65
HERPUD2-206ENST00000438224 KSR2Q6VAB6 950 aa10.97□□□□□ -0.65
HERPUD2-206ENST00000438224 RBM17Q96I25 401 aaKnown RBP10.97□□□□□ -0.65
HERPUD2-206ENST00000438224 STK31Q9BXU1 1019 aa10.97□□□□□ -0.65
HERPUD2-206ENST00000438224 ZMYND15Q9H091 742 aa10.97□□□□□ -0.65
HERPUD2-206ENST00000438224 SCN4AP35499 1836 aa10.97□□□□□ -0.65
HERPUD2-206ENST00000438224 A0A1B0GUL6 1792 aa10.96□□□□□ -0.65
HERPUD2-206ENST00000438224 ZNF541Q9H0D2 1346 aa10.96□□□□□ -0.65
HERPUD2-206ENST00000438224 GLTPD2A6NH11 291 aa10.96□□□□□ -0.65
HERPUD2-206ENST00000438224 IRS4O14654 1257 aaPredicted RBP10.96□□□□□ -0.65
HERPUD2-206ENST00000438224 SF3B3Q15393 1217 aaKnown RBP10.96□□□□□ -0.65
HERPUD2-206ENST00000438224 CWF19L2Q2TBE0 894 aaKnown RBP10.96□□□□□ -0.65
HERPUD2-206ENST00000438224 SMYD5Q6GMV2 418 aa10.96□□□□□ -0.65
HERPUD2-206ENST00000438224 CCDC191Q8NCU4 936 aa10.96□□□□□ -0.65
HERPUD2-206ENST00000438224 CDCA7LQ96GN5 454 aa10.96□□□□□ -0.65
HERPUD2-206ENST00000438224 RRAGCQ9HB90 399 aa10.96□□□□□ -0.65
HERPUD2-206ENST00000438224 SCN9AQ15858 1988 aa10.96□□□□□ -0.66
HERPUD2-206ENST00000438224 KDM2BQ8NHM5 1336 aa10.95□□□□□ -0.66
HERPUD2-206ENST00000438224 DDX58O95786 925 aaKnown RBP10.95□□□□□ -0.66
HERPUD2-206ENST00000438224 PCCAP05165 728 aaPredicted RBP10.95□□□□□ -0.66
HERPUD2-206ENST00000438224 GRAPQ13588 217 aa10.95□□□□□ -0.66
HERPUD2-206ENST00000438224 ZNF467Q7Z7K2 595 aaPredicted RBP10.95□□□□□ -0.66
HERPUD2-206ENST00000438224 RTKN2Q8IZC4 609 aa10.95□□□□□ -0.66
HERPUD2-206ENST00000438224 ZBTB38Q8NAP3 1195 aaPredicted RBP10.95□□□□□ -0.66
HERPUD2-206ENST00000438224 GRAPLQ8TC17 118 aaPredicted RBP10.95□□□□□ -0.66
HERPUD2-206ENST00000438224 CELF1Q92879 486 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms