RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 KDM2BQ8NHM5 1336 aa22.7■■□□□ 1.22
NCSTN-208ENST00000438008 CT47B1P0C2W7 299 aaPredicted RBP22.69■■□□□ 1.22
NCSTN-208ENST00000438008 JARID2Q92833 1246 aaPredicted RBP22.69■■□□□ 1.22
NCSTN-208ENST00000438008 ZNF277Q9NRM2 450 aaPredicted RBP22.69■■□□□ 1.22
NCSTN-208ENST00000438008 GLTPD2A6NH11 291 aa22.68■■□□□ 1.22
NCSTN-208ENST00000438008 F6X3S4 739 aa22.68■■□□□ 1.22
NCSTN-208ENST00000438008 KIF3CO14782 793 aa22.68■■□□□ 1.22
NCSTN-208ENST00000438008 BEND3Q5T5X7 828 aa22.68■■□□□ 1.22
NCSTN-208ENST00000438008 IARSP41252 1262 aaKnown RBP22.67■■□□□ 1.22
NCSTN-208ENST00000438008 ALDH1L2Q3SY69 923 aa22.67■■□□□ 1.22
NCSTN-208ENST00000438008 CCDC152Q4G0S7 254 aa22.67■■□□□ 1.22
NCSTN-208ENST00000438008 SLC51AQ86UW1 340 aa22.67■■□□□ 1.22
NCSTN-208ENST00000438008 SSH1Q8WYL5 1049 aa22.67■■□□□ 1.22
NCSTN-208ENST00000438008 CELF1Q92879 486 aaKnown RBP22.67■■□□□ 1.22
NCSTN-208ENST00000438008 NMRK2Q9NPI5 230 aa22.66■■□□□ 1.22
NCSTN-208ENST00000438008 DICER1Q9UPY3 1922 aaKnown RBP22.65■■□□□ 1.22
NCSTN-208ENST00000438008 CCDC88AQ3V6T2 1871 aa22.65■■□□□ 1.22
NCSTN-208ENST00000438008 CASP7P55210 303 aa22.65■■□□□ 1.22
NCSTN-208ENST00000438008 C1QTNF8P60827 252 aa22.65■■□□□ 1.22
NCSTN-208ENST00000438008 DPY19L2Q6NUT2 758 aa22.65■■□□□ 1.22
NCSTN-208ENST00000438008 UBE3BQ7Z3V4 1068 aa22.65■■□□□ 1.22
NCSTN-208ENST00000438008 PLA2G12BQ9BX93 195 aa22.65■■□□□ 1.22
NCSTN-208ENST00000438008 RTFDC1Q9BY42 306 aaPredicted RBP22.65■■□□□ 1.22
NCSTN-208ENST00000438008 PTPRCP08575 1304 aa22.64■■□□□ 1.22
NCSTN-208ENST00000438008 CTSWP56202 376 aa22.64■■□□□ 1.21
NCSTN-208ENST00000438008 RPS8P62241 208 aaKnown RBP22.64■■□□□ 1.21
NCSTN-208ENST00000438008 VPS33BQ9H267 617 aa22.64■■□□□ 1.21
NCSTN-208ENST00000438008 TIAM2Q8IVF5 1701 aa22.64■■□□□ 1.21
NCSTN-208ENST00000438008 HNRNPUQ00839 825 aaKnown RBP eCLIP22.63■■□□□ 1.21
NCSTN-208ENST00000438008 MPNDQ8N594 471 aa22.63■■□□□ 1.21
NCSTN-208ENST00000438008 SUPT20HQ8NEM7 779 aa22.63■■□□□ 1.21
NCSTN-208ENST00000438008 TTLL11Q8NHH1 800 aa22.63■■□□□ 1.21
NCSTN-208ENST00000438008 SEC31BQ9NQW1 1179 aa22.63■■□□□ 1.21
NCSTN-208ENST00000438008 ALDH1L1O75891 902 aa22.62■■□□□ 1.21
NCSTN-208ENST00000438008 DPP8Q6V1X1 898 aaPredicted RBP22.62■■□□□ 1.21
NCSTN-208ENST00000438008 RTL9Q8NET4 1388 aa22.62■■□□□ 1.21
NCSTN-208ENST00000438008 FZD9O00144 591 aa22.61■■□□□ 1.21
NCSTN-208ENST00000438008 RRAGCQ9HB90 399 aa22.61■■□□□ 1.21
NCSTN-208ENST00000438008 BRPF1P55201 1214 aaPredicted RBP22.6■■□□□ 1.21
NCSTN-208ENST00000438008 JDP2Q8WYK2 163 aa22.6■■□□□ 1.21
NCSTN-208ENST00000438008 SRCIN1Q9C0H9 1055 aa22.6■■□□□ 1.21
NCSTN-208ENST00000438008 COL4A1P02462 1669 aa22.59■■□□□ 1.21
NCSTN-208ENST00000438008 CSF1RP07333 972 aa22.59■■□□□ 1.21
NCSTN-208ENST00000438008 SLC4A10Q6U841 1118 aa22.59■■□□□ 1.21
NCSTN-208ENST00000438008 LARGE2Q8N3Y3 721 aa22.59■■□□□ 1.21
NCSTN-208ENST00000438008 CCDC85AQ96PX6 553 aaPredicted RBP22.59■■□□□ 1.21
NCSTN-208ENST00000438008 BCL2L13Q9BXK5 485 aa22.59■■□□□ 1.21
NCSTN-208ENST00000438008 SMC4Q9NTJ3 1288 aa22.59■■□□□ 1.21
NCSTN-208ENST00000438008 TAF1P21675 1872 aa22.59■■□□□ 1.21
NCSTN-208ENST00000438008 LRRC37AA6NMS7 1700 aa22.58■■□□□ 1.21
NCSTN-208ENST00000438008 GRM8O00222 908 aa22.58■■□□□ 1.21
NCSTN-208ENST00000438008 TOMM70O94826 608 aa22.58■■□□□ 1.21
NCSTN-208ENST00000438008 VEGFAP15692 232 aaPredicted RBP22.58■■□□□ 1.21
NCSTN-208ENST00000438008 CDC5LQ99459 802 aaKnown RBP22.58■■□□□ 1.21
NCSTN-208ENST00000438008 GREM2Q9H772 168 aa22.58■■□□□ 1.21
NCSTN-208ENST00000438008 POTECB2RU33 542 aa22.57■■□□□ 1.2
NCSTN-208ENST00000438008 PPIP5K2O43314 1243 aa22.57■■□□□ 1.2
NCSTN-208ENST00000438008 DDNO94850 711 aaPredicted RBP22.57■■□□□ 1.2
NCSTN-208ENST00000438008 ANKRD18AQ8IVF6 992 aa22.57■■□□□ 1.2
NCSTN-208ENST00000438008 NSFL1CQ9UNZ2 370 aaKnown RBP22.57■■□□□ 1.2
NCSTN-208ENST00000438008 COL4A5P29400 1685 aa22.56■■□□□ 1.2
NCSTN-208ENST00000438008 GPSM2P81274 684 aa22.56■■□□□ 1.2
NCSTN-208ENST00000438008 KIAA2012Q0VF49 1180 aa22.56■■□□□ 1.2
NCSTN-208ENST00000438008 AOC3Q16853 763 aa22.56■■□□□ 1.2
NCSTN-208ENST00000438008 PODXL2Q9NZ53 605 aa22.56■■□□□ 1.2
NCSTN-208ENST00000438008 WDR90Q96KV7 1748 aa22.56■■□□□ 1.2
NCSTN-208ENST00000438008 ZNF541Q9H0D2 1346 aa22.56■■□□□ 1.2
NCSTN-208ENST00000438008 RARSP54136 660 aaKnown RBP22.55■■□□□ 1.2
NCSTN-208ENST00000438008 FOXO4P98177 505 aa22.55■■□□□ 1.2
NCSTN-208ENST00000438008 NIM1KQ8IY84 436 aa22.55■■□□□ 1.2
NCSTN-208ENST00000438008 L3MBTL3Q96JM7 780 aaPredicted RBP22.55■■□□□ 1.2
NCSTN-208ENST00000438008 C9orf78Q9NZ63 289 aaPredicted RBP22.55■■□□□ 1.2
NCSTN-208ENST00000438008 ZBED9Q6R2W3 1325 aa22.55■■□□□ 1.2
NCSTN-208ENST00000438008 C16orf71Q8IYS4 520 aaPredicted RBP22.54■■□□□ 1.2
NCSTN-208ENST00000438008 RBM46Q8TBY0 533 aaKnown RBP22.54■■□□□ 1.2
NCSTN-208ENST00000438008 BSDC1Q9NW68 430 aaPredicted RBP22.54■■□□□ 1.2
NCSTN-208ENST00000438008 DUOX1Q9NRD9 1551 aa22.54■■□□□ 1.2
NCSTN-208ENST00000438008 UTYO14607 1347 aa22.54■■□□□ 1.2
NCSTN-208ENST00000438008 EIF6P56537 245 aaKnown RBP22.53■■□□□ 1.2
NCSTN-208ENST00000438008 GPC2Q8N158 579 aa22.53■■□□□ 1.2
NCSTN-208ENST00000438008 POLLQ9UGP5 575 aa22.53■■□□□ 1.2
NCSTN-208ENST00000438008 ITGA6P23229 1130 aa22.52■■□□□ 1.2
NCSTN-208ENST00000438008 FAM161AQ3B820 660 aa22.52■■□□□ 1.2
NCSTN-208ENST00000438008 TBC1D16Q8TBP0 767 aa22.52■■□□□ 1.2
NCSTN-208ENST00000438008 ZNRF3Q9ULT6 936 aa22.52■■□□□ 1.2
NCSTN-208ENST00000438008 NOB1Q9ULX3 412 aaKnown RBP22.52■■□□□ 1.2
NCSTN-208ENST00000438008 MYH3P11055 1940 aa22.52■■□□□ 1.2
NCSTN-208ENST00000438008 C6orf229H3BNL8 230 aa22.51■■□□□ 1.19
NCSTN-208ENST00000438008 WASHC4Q2M389 1173 aa22.51■■□□□ 1.19
NCSTN-208ENST00000438008 EYA3Q99504 573 aa22.51■■□□□ 1.19
NCSTN-208ENST00000438008 IQCA1LA6NCM1 817 aa22.5■■□□□ 1.19
NCSTN-208ENST00000438008 NBPF7P0C2Y1 421 aaPredicted RBP22.5■■□□□ 1.19
NCSTN-208ENST00000438008 IGHMBP2P38935 993 aaKnown RBP22.5■■□□□ 1.19
NCSTN-208ENST00000438008 EPHA10Q5JZY3 1008 aa22.5■■□□□ 1.19
NCSTN-208ENST00000438008 API5Q9BZZ5 524 aaKnown RBP22.5■■□□□ 1.19
NCSTN-208ENST00000438008 ANKIB1Q9P2G1 1089 aa22.5■■□□□ 1.19
NCSTN-208ENST00000438008 MINPP1Q9UNW1 487 aa22.5■■□□□ 1.19
NCSTN-208ENST00000438008 LTBP1Q14766 1721 aa22.5■■□□□ 1.19
NCSTN-208ENST00000438008 LMBR1LQ6UX01 489 aa22.49■■□□□ 1.19
NCSTN-208ENST00000438008 ARHGAP45Q92619 1136 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms