RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 TTLL11Q8NHH1 800 aa18.61■□□□□ 0.57
CPNE1-215ENST00000437100 CRAMP1Q96RY5 1269 aa18.61■□□□□ 0.57
CPNE1-215ENST00000437100 PIM2Q9P1W9 311 aa18.61■□□□□ 0.57
CPNE1-215ENST00000437100 MVPQ14764 893 aaKnown RBP18.6■□□□□ 0.57
CPNE1-215ENST00000437100 ITPRIPQ8IWB1 547 aa18.6■□□□□ 0.57
CPNE1-215ENST00000437100 CNKSR1Q969H4 720 aa18.6■□□□□ 0.57
CPNE1-215ENST00000437100 ZBTB7BO15156 539 aaPredicted RBP18.59■□□□□ 0.57
CPNE1-215ENST00000437100 CCDC152Q4G0S7 254 aa18.59■□□□□ 0.57
CPNE1-215ENST00000437100 ANKRD44Q8N8A2 993 aa18.59■□□□□ 0.57
CPNE1-215ENST00000437100 RPGRQ92834 1020 aaKnown RBP18.59■□□□□ 0.57
CPNE1-215ENST00000437100 ZNF622Q969S3 477 aaKnown RBP eCLIP18.59■□□□□ 0.57
CPNE1-215ENST00000437100 RBM17Q96I25 401 aaKnown RBP18.59■□□□□ 0.57
CPNE1-215ENST00000437100 COL4A1P02462 1669 aa18.59■□□□□ 0.57
CPNE1-215ENST00000437100 GNAI3P08754 354 aa18.58■□□□□ 0.56
CPNE1-215ENST00000437100 UBTFL1P0CB47 393 aaPredicted RBP18.58■□□□□ 0.56
CPNE1-215ENST00000437100 PRPF40BQ6NWY9 871 aaKnown RBP18.58■□□□□ 0.56
CPNE1-215ENST00000437100 TTLL6Q8N841 843 aa18.58■□□□□ 0.56
CPNE1-215ENST00000437100 C7orf43Q8WVR3 580 aa18.58■□□□□ 0.56
CPNE1-215ENST00000437100 BICC1Q9H694 974 aaKnown RBP18.58■□□□□ 0.56
CPNE1-215ENST00000437100 GREM2Q9H772 168 aa18.58■□□□□ 0.56
CPNE1-215ENST00000437100 YBX3P16989 372 aaKnown RBP eCLIP18.57■□□□□ 0.562e-6■■■■□ 21.8
CPNE1-215ENST00000437100 ALDH1B1P30837 517 aa18.57■□□□□ 0.56
CPNE1-215ENST00000437100 GRAPQ13588 217 aa18.57■□□□□ 0.56
CPNE1-215ENST00000437100 DALRD3Q5D0E6 543 aaKnown RBP18.57■□□□□ 0.56
CPNE1-215ENST00000437100 GRAPLQ8TC17 118 aaPredicted RBP18.57■□□□□ 0.56
CPNE1-215ENST00000437100 COG6Q9Y2V7 657 aa18.57■□□□□ 0.56
CPNE1-215ENST00000437100 GOLGB1Q14789 3259 aaKnown RBP18.57■□□□□ 0.56
CPNE1-215ENST00000437100 SNED1Q8TER0 1413 aa18.57■□□□□ 0.56
CPNE1-215ENST00000437100 FAM161AQ3B820 660 aa18.56■□□□□ 0.56
CPNE1-215ENST00000437100 LMBR1LQ6UX01 489 aa18.56■□□□□ 0.56
CPNE1-215ENST00000437100 DDX46Q7L014 1031 aaKnown RBP18.56■□□□□ 0.56
CPNE1-215ENST00000437100 SEC31BQ9NQW1 1179 aa18.56■□□□□ 0.56
CPNE1-215ENST00000437100 MYH3P11055 1940 aa18.55■□□□□ 0.56
CPNE1-215ENST00000437100 CELF1Q92879 486 aaKnown RBP18.55■□□□□ 0.56
CPNE1-215ENST00000437100 DDX19BQ9UMR2 479 aa18.55■□□□□ 0.56
CPNE1-215ENST00000437100 LRRFIP2Q9Y608 721 aaKnown RBP18.55■□□□□ 0.56
CPNE1-215ENST00000437100 SLX4Q8IY92 1834 aa18.54■□□□□ 0.56
CPNE1-215ENST00000437100 CCDC85AQ96PX6 553 aaPredicted RBP18.54■□□□□ 0.56
CPNE1-215ENST00000437100 WWC3Q9ULE0 1092 aa18.54■□□□□ 0.56
CPNE1-215ENST00000437100 HDAC5Q9UQL6 1122 aa18.54■□□□□ 0.56
CPNE1-215ENST00000437100 BCS1LQ9Y276 419 aa18.54■□□□□ 0.56
CPNE1-215ENST00000437100 SUPT16HQ9Y5B9 1047 aaKnown RBP18.54■□□□□ 0.56
CPNE1-215ENST00000437100 UTRNP46939 3433 aa18.54■□□□□ 0.56
CPNE1-215ENST00000437100 BBOX1O75936 387 aa18.53■□□□□ 0.56
CPNE1-215ENST00000437100 GNAI2P04899 355 aa18.53■□□□□ 0.56
CPNE1-215ENST00000437100 ITGA6P23229 1130 aa18.53■□□□□ 0.56
CPNE1-215ENST00000437100 MTX1Q13505 466 aa18.53■□□□□ 0.56
CPNE1-215ENST00000437100 ZBTB40Q9NUA8 1239 aa18.53■□□□□ 0.56
CPNE1-215ENST00000437100 ARFGEF1Q9Y6D6 1849 aa18.53■□□□□ 0.56
CPNE1-215ENST00000437100 PPEF1O14829 653 aaPredicted RBP18.52■□□□□ 0.56
CPNE1-215ENST00000437100 TMC4Q7Z404 712 aa18.52■□□□□ 0.56
CPNE1-215ENST00000437100 SLC51AQ86UW1 340 aa18.52■□□□□ 0.56
CPNE1-215ENST00000437100 CDC5LQ99459 802 aaKnown RBP18.52■□□□□ 0.56
CPNE1-215ENST00000437100 RPS8P62241 208 aaKnown RBP18.51■□□□□ 0.55
CPNE1-215ENST00000437100 ATP6V0A2Q9Y487 856 aa18.51■□□□□ 0.55
CPNE1-215ENST00000437100 LRRC37AA6NMS7 1700 aa18.51■□□□□ 0.55
CPNE1-215ENST00000437100 ANKRD18BA2A2Z9 1011 aa18.5■□□□□ 0.55
CPNE1-215ENST00000437100 RFX5P48382 616 aaPredicted RBP18.5■□□□□ 0.55
CPNE1-215ENST00000437100 IFIT5Q13325 482 aaKnown RBP18.5■□□□□ 0.55
CPNE1-215ENST00000437100 C21orf2O43822 256 aa18.49■□□□□ 0.55
CPNE1-215ENST00000437100 GPR162Q16538 588 aa18.49■□□□□ 0.55
CPNE1-215ENST00000437100 CCDC57Q2TAC2 916 aa18.49■□□□□ 0.55
CPNE1-215ENST00000437100 SOGA3Q5TF21 947 aa18.49■□□□□ 0.55
CPNE1-215ENST00000437100 OLFM4Q6UX06 510 aa18.49■□□□□ 0.55
CPNE1-215ENST00000437100 ANKRD18AQ8IVF6 992 aa18.49■□□□□ 0.55
CPNE1-215ENST00000437100 SP8Q8IXZ3 490 aa18.49■□□□□ 0.55
CPNE1-215ENST00000437100 C1orf115Q9H7X2 142 aa18.49■□□□□ 0.55
CPNE1-215ENST00000437100 BSDC1Q9NW68 430 aaPredicted RBP18.49■□□□□ 0.55
CPNE1-215ENST00000437100 TAF1P21675 1872 aa18.48■□□□□ 0.55
CPNE1-215ENST00000437100 CCDC93Q567U6 631 aa18.48■□□□□ 0.55
CPNE1-215ENST00000437100 CC2D2BQ6DHV5 1058 aa18.48■□□□□ 0.55
CPNE1-215ENST00000437100 CRBNQ96SW2 442 aa18.48■□□□□ 0.55
CPNE1-215ENST00000437100 CHMP4BQ9H444 224 aaKnown RBP18.48■□□□□ 0.55
CPNE1-215ENST00000437100 CHMP3Q9Y3E7 222 aa18.48■□□□□ 0.55
CPNE1-215ENST00000437100 NFKBIEO00221 500 aa18.47■□□□□ 0.55
CPNE1-215ENST00000437100 GRIN3BO60391 1043 aa18.47■□□□□ 0.55
CPNE1-215ENST00000437100 PELP1Q8IZL8 1130 aaKnown RBP18.47■□□□□ 0.55
CPNE1-215ENST00000437100 LTBP1Q14766 1721 aa18.46■□□□□ 0.55
CPNE1-215ENST00000437100 CACNA1SQ13698 1873 aa18.46■□□□□ 0.55
CPNE1-215ENST00000437100 IGHMBP2P38935 993 aaKnown RBP18.46■□□□□ 0.55
CPNE1-215ENST00000437100 PTPN12Q05209 780 aaKnown RBP18.46■□□□□ 0.55
CPNE1-215ENST00000437100 POLA2Q14181 598 aa18.46■□□□□ 0.55
CPNE1-215ENST00000437100 GRIPAP1Q4V328 841 aa18.46■□□□□ 0.55
CPNE1-215ENST00000437100 CEP85Q6P2H3 762 aa18.46■□□□□ 0.55
CPNE1-215ENST00000437100 ZNF594Q96JF6 807 aaPredicted RBP18.46■□□□□ 0.55
CPNE1-215ENST00000437100 ZNF219Q9P2Y4 722 aaPredicted RBP18.46■□□□□ 0.55
CPNE1-215ENST00000437100 LTBP3Q9NS15 1303 aa18.46■□□□□ 0.55
CPNE1-215ENST00000437100 PNMA6EA0A0J9YXQ4 647 aa18.45■□□□□ 0.54
CPNE1-215ENST00000437100 ATP8B2P98198 1209 aa18.45■□□□□ 0.54
CPNE1-215ENST00000437100 MINPP1Q9UNW1 487 aa18.45■□□□□ 0.54
CPNE1-215ENST00000437100 DUOX1Q9NRD9 1551 aa18.45■□□□□ 0.54
CPNE1-215ENST00000437100 SRGAP3O43295 1099 aa18.44■□□□□ 0.54
CPNE1-215ENST00000437100 RTKN2Q8IZC4 609 aa18.44■□□□□ 0.54
CPNE1-215ENST00000437100 SSH3Q8TE77 659 aa18.44■□□□□ 0.54
CPNE1-215ENST00000437100 RTFDC1Q9BY42 306 aaPredicted RBP18.44■□□□□ 0.54
CPNE1-215ENST00000437100 COPRSQ9NQ92 184 aa18.44■□□□□ 0.54
CPNE1-215ENST00000437100 PODXL2Q9NZ53 605 aa18.44■□□□□ 0.54
CPNE1-215ENST00000437100 FER1L6Q2WGJ9 1857 aa18.43■□□□□ 0.54
CPNE1-215ENST00000437100 CENPBP07199 599 aaPredicted RBP18.43■□□□□ 0.54
CPNE1-215ENST00000437100 PRELPP51888 382 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms