RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 ANKRD31Q8N7Z5 1873 aa16.67■□□□□ 0.26
RPE-208ENST00000436630 IGHDP01880 384 aa16.66■□□□□ 0.26
RPE-208ENST00000436630 SF3B3Q15393 1217 aaKnown RBP16.66■□□□□ 0.26
RPE-208ENST00000436630 CCDC57Q2TAC2 916 aa16.66■□□□□ 0.26
RPE-208ENST00000436630 TTLL11Q8NHH1 800 aa16.66■□□□□ 0.26
RPE-208ENST00000436630 NLRP3Q96P20 1036 aa16.66■□□□□ 0.26
RPE-208ENST00000436630 DCTPP1Q9H773 170 aa16.66■□□□□ 0.26
RPE-208ENST00000436630 FBXO3Q9UK99 471 aa16.66■□□□□ 0.26
RPE-208ENST00000436630 CHMP3Q9Y3E7 222 aa16.66■□□□□ 0.26
RPE-208ENST00000436630 HCLS1P14317 486 aaPredicted RBP16.65■□□□□ 0.26
RPE-208ENST00000436630 IFIT5Q13325 482 aaKnown RBP16.65■□□□□ 0.26
RPE-208ENST00000436630 FAM161AQ3B820 660 aa16.65■□□□□ 0.26
RPE-208ENST00000436630 ERC1Q8IUD2 1116 aa16.65■□□□□ 0.26
RPE-208ENST00000436630 SYNE4Q8N205 404 aa16.65■□□□□ 0.26
RPE-208ENST00000436630 MTFR1LQ9H019 292 aa16.65■□□□□ 0.26
RPE-208ENST00000436630 COPRSQ9NQ92 184 aa16.65■□□□□ 0.26
RPE-208ENST00000436630 NOP58Q9Y2X3 529 aaKnown RBP16.65■□□□□ 0.26
RPE-208ENST00000436630 KIF13BQ9NQT8 1826 aa16.64■□□□□ 0.25
RPE-208ENST00000436630 ANKRD18BA2A2Z9 1011 aa16.64■□□□□ 0.25
RPE-208ENST00000436630 RAB11FIP3O75154 756 aa16.64■□□□□ 0.25
RPE-208ENST00000436630 MSL1Q68DK7 614 aa16.64■□□□□ 0.25
RPE-208ENST00000436630 ZBTB47Q9UFB7 747 aaPredicted RBP16.64■□□□□ 0.25
RPE-208ENST00000436630 PDZRN3Q9UPQ7 1066 aa16.64■□□□□ 0.25
RPE-208ENST00000436630 RFX5P48382 616 aaPredicted RBP16.63■□□□□ 0.25
RPE-208ENST00000436630 R3HDM1Q15032 1099 aaKnown RBP16.63■□□□□ 0.25
RPE-208ENST00000436630 TAF7LQ5H9L4 462 aa16.63■□□□□ 0.25
RPE-208ENST00000436630 CDC5LQ99459 802 aaKnown RBP16.63■□□□□ 0.25
RPE-208ENST00000436630 BRIP1Q9BX63 1249 aa16.63■□□□□ 0.25
RPE-208ENST00000436630 SPEF2Q9C093 1822 aa16.63■□□□□ 0.25
RPE-208ENST00000436630 C10orf71Q711Q0 1435 aa16.62■□□□□ 0.25
RPE-208ENST00000436630 SURF6O75683 361 aaKnown RBP16.62■□□□□ 0.25
RPE-208ENST00000436630 CIAO1O76071 339 aa16.62■□□□□ 0.25
RPE-208ENST00000436630 ITGA6P23229 1130 aa16.62■□□□□ 0.25
RPE-208ENST00000436630 POLD1P28340 1107 aa16.62■□□□□ 0.25
RPE-208ENST00000436630 POTEDQ86YR6 584 aa16.62■□□□□ 0.25
RPE-208ENST00000436630 GREM2Q9H772 168 aa16.62■□□□□ 0.25
RPE-208ENST00000436630 PTPN12Q05209 780 aaKnown RBP16.61■□□□□ 0.25
RPE-208ENST00000436630 G3BP1Q13283 466 aaKnown RBP eCLIP16.61■□□□□ 0.25
RPE-208ENST00000436630 OS9Q13438 667 aaPredicted RBP16.61■□□□□ 0.25
RPE-208ENST00000436630 CRY2Q49AN0 593 aa16.61■□□□□ 0.25
RPE-208ENST00000436630 KIF1BPQ96EK5 621 aa16.61■□□□□ 0.25
RPE-208ENST00000436630 COL11A2P13942 1736 aaPredicted RBP16.61■□□□□ 0.25
RPE-208ENST00000436630 DLEC1Q9Y238 1755 aa16.61■□□□□ 0.25
RPE-208ENST00000436630 KLRG2A4D1S0 409 aaPredicted RBP16.6■□□□□ 0.25
RPE-208ENST00000436630 PDE6BP35913 854 aa16.6■□□□□ 0.25
RPE-208ENST00000436630 PDGFDQ9GZP0 370 aaPredicted RBP16.6■□□□□ 0.25
RPE-208ENST00000436630 EXOC6BQ9Y2D4 811 aa16.6■□□□□ 0.25
RPE-208ENST00000436630 A0A1B0GUL6 1792 aa16.59■□□□□ 0.25
RPE-208ENST00000436630 IGHMBP2P38935 993 aaKnown RBP16.59■□□□□ 0.25
RPE-208ENST00000436630 IL15P40933 162 aaPredicted RBP16.59■□□□□ 0.25
RPE-208ENST00000436630 NUCB1Q02818 461 aa16.59■□□□□ 0.25
RPE-208ENST00000436630 DDX46Q7L014 1031 aaKnown RBP16.59■□□□□ 0.25
RPE-208ENST00000436630 RPGRQ92834 1020 aaKnown RBP16.59■□□□□ 0.25
RPE-208ENST00000436630 LRRCC1Q9C099 1032 aa16.59■□□□□ 0.25
RPE-208ENST00000436630 EYA2O00167 538 aa16.58■□□□□ 0.24
RPE-208ENST00000436630 ZBTB7AO95365 584 aa16.57■□□□□ 0.24
RPE-208ENST00000436630 C3orf67Q6ZVT6 689 aa16.57■□□□□ 0.24
RPE-208ENST00000436630 CHD1LQ86WJ1 897 aa16.57■□□□□ 0.24
RPE-208ENST00000436630 ANKRD18AQ8IVF6 992 aa16.57■□□□□ 0.24
RPE-208ENST00000436630 CCDC85AQ96PX6 553 aaPredicted RBP16.57■□□□□ 0.24
RPE-208ENST00000436630 MPHOSPH8Q99549 860 aa16.57■□□□□ 0.24
RPE-208ENST00000436630 PA2G4Q9UQ80 394 aaKnown RBP16.57■□□□□ 0.24
RPE-208ENST00000436630 LRRC37AA6NMS7 1700 aa16.56■□□□□ 0.24
RPE-208ENST00000436630 HOXA10P31260 410 aaPredicted RBP16.56■□□□□ 0.24
RPE-208ENST00000436630 ANKRD45Q5TZF3 282 aa16.56■□□□□ 0.24
RPE-208ENST00000436630 TMC4Q7Z404 712 aa16.56■□□□□ 0.24
RPE-208ENST00000436630 RHPN1Q8TCX5 695 aa16.56■□□□□ 0.24
RPE-208ENST00000436630 RBM17Q96I25 401 aaKnown RBP16.56■□□□□ 0.24
RPE-208ENST00000436630 SIL1Q9H173 461 aa16.56■□□□□ 0.24
RPE-208ENST00000436630 ARAP2Q8WZ64 1704 aa16.56■□□□□ 0.24
RPE-208ENST00000436630 TAF1P21675 1872 aa16.55■□□□□ 0.24
RPE-208ENST00000436630 MROH5Q6ZUA9 1318 aa16.55■□□□□ 0.24
RPE-208ENST00000436630 PSDA5PKW4 1024 aaPredicted RBP16.55■□□□□ 0.24
RPE-208ENST00000436630 NPR1P16066 1061 aa16.55■□□□□ 0.24
RPE-208ENST00000436630 GRAPQ13588 217 aa16.55■□□□□ 0.24
RPE-208ENST00000436630 LDHAL6AQ6ZMR3 332 aa16.55■□□□□ 0.24
RPE-208ENST00000436630 CCDC24Q8N4L8 307 aa16.55■□□□□ 0.24
RPE-208ENST00000436630 KLHDC4Q8TBB5 520 aa16.55■□□□□ 0.24
RPE-208ENST00000436630 GRAPLQ8TC17 118 aaPredicted RBP16.55■□□□□ 0.24
RPE-208ENST00000436630 CRAMP1Q96RY5 1269 aa16.55■□□□□ 0.24
RPE-208ENST00000436630 CNNM1Q9NRU3 951 aa16.55■□□□□ 0.24
RPE-208ENST00000436630 CLASRPQ8N2M8 674 aaKnown RBP16.54■□□□□ 0.24
RPE-208ENST00000436630 GPR108Q9NPR9 543 aa16.54■□□□□ 0.24
RPE-208ENST00000436630 SEC31BQ9NQW1 1179 aa16.54■□□□□ 0.24
RPE-208ENST00000436630 BSDC1Q9NW68 430 aaPredicted RBP16.54■□□□□ 0.24
RPE-208ENST00000436630 H0YIN7 160 aa16.53■□□□□ 0.24
RPE-208ENST00000436630 SRGNP10124 158 aa16.53■□□□□ 0.24
RPE-208ENST00000436630 RPS8P62241 208 aaKnown RBP16.53■□□□□ 0.24
RPE-208ENST00000436630 STYK1Q6J9G0 422 aa16.53■□□□□ 0.24
RPE-208ENST00000436630 ATG9AQ7Z3C6 839 aa16.53■□□□□ 0.24
RPE-208ENST00000436630 MASTLQ96GX5 879 aa16.53■□□□□ 0.24
RPE-208ENST00000436630 ZNF594Q96JF6 807 aaPredicted RBP16.53■□□□□ 0.24
RPE-208ENST00000436630 LNPKQ9C0E8 428 aa16.53■□□□□ 0.24
RPE-208ENST00000436630 RIPOR2Q9Y4F9 1068 aa16.53■□□□□ 0.24
RPE-208ENST00000436630 ZNF609O15014 1411 aa16.53■□□□□ 0.24
RPE-208ENST00000436630 CACNA1SQ13698 1873 aa16.52■□□□□ 0.24
RPE-208ENST00000436630 APBB1O00213 710 aa16.52■□□□□ 0.24
RPE-208ENST00000436630 ALDH1B1P30837 517 aa16.52■□□□□ 0.24
RPE-208ENST00000436630 METTL24Q5JXM2 366 aa16.52■□□□□ 0.24
RPE-208ENST00000436630 SGIP1Q9BQI5 828 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms