RNA–Protein interactions for RNA: ENST00000436374.5

CCDC144A-209, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-209ENST00000436374 MTX1Q13505 466 aa22.05■■□□□ 1.12
CCDC144A-209ENST00000436374 HDAC1Q13547 482 aaPredicted RBP22.05■■□□□ 1.12
CCDC144A-209ENST00000436374 ANKRD44Q8N8A2 993 aa22.05■■□□□ 1.12
CCDC144A-209ENST00000436374 LRRFIP2Q9Y608 721 aaKnown RBP22.05■■□□□ 1.12
CCDC144A-209ENST00000436374 KIF3CO14782 793 aa22.04■■□□□ 1.12
CCDC144A-209ENST00000436374 CASP7P55210 303 aa22.04■■□□□ 1.12
CCDC144A-209ENST00000436374 ST5P78524 1137 aa22.04■■□□□ 1.12
CCDC144A-209ENST00000436374 IRS4O14654 1257 aaPredicted RBP22.03■■□□□ 1.12
CCDC144A-209ENST00000436374 PDE8AO60658 829 aa22.03■■□□□ 1.12
CCDC144A-209ENST00000436374 ATP8B2P98198 1209 aa22.03■■□□□ 1.12
CCDC144A-209ENST00000436374 CCDC24Q8N4L8 307 aa22.03■■□□□ 1.12
CCDC144A-209ENST00000436374 CNBD1Q8NA66 436 aa22.03■■□□□ 1.12
CCDC144A-209ENST00000436374 FAM89AQ96GI7 184 aa22.03■■□□□ 1.12
CCDC144A-209ENST00000436374 COL11A2P13942 1736 aaPredicted RBP22.03■■□□□ 1.12
CCDC144A-209ENST00000436374 H0YIN7 160 aa22.02■■□□□ 1.12
CCDC144A-209ENST00000436374 SLC10A5Q5PT55 438 aa22.02■■□□□ 1.12
CCDC144A-209ENST00000436374 C9orf131Q5VYM1 1079 aa22.02■■□□□ 1.12
CCDC144A-209ENST00000436374 CEP85Q6P2H3 762 aa22.02■■□□□ 1.12
CCDC144A-209ENST00000436374 SUCLG2Q96I99 432 aa22.02■■□□□ 1.12
CCDC144A-209ENST00000436374 PDZRN3Q9UPQ7 1066 aa22.02■■□□□ 1.12
CCDC144A-209ENST00000436374 RIC1Q4ADV7 1423 aa22.01■■□□□ 1.11
CCDC144A-209ENST00000436374 PDE6BP35913 854 aa22.01■■□□□ 1.11
CCDC144A-209ENST00000436374 RABL6Q3YEC7 729 aaPredicted RBP22.01■■□□□ 1.11
CCDC144A-209ENST00000436374 C2CD5Q86YS7 1000 aa22.01■■□□□ 1.11
CCDC144A-209ENST00000436374 CCDC88AQ3V6T2 1871 aa22■■□□□ 1.11
CCDC144A-209ENST00000436374 HSP90AB4PQ58FF6 505 aa22■■□□□ 1.11
CCDC144A-209ENST00000436374 PRR5LQ6MZQ0 368 aa22■■□□□ 1.11
CCDC144A-209ENST00000436374 BICC1Q9H694 974 aaKnown RBP22■■□□□ 1.11
CCDC144A-209ENST00000436374 C1orf115Q9H7X2 142 aa22■■□□□ 1.11
CCDC144A-209ENST00000436374 PCDHB15Q9Y5E8 787 aa22■■□□□ 1.11
CCDC144A-209ENST00000436374 SRGAP3O43295 1099 aa21.99■■□□□ 1.11
CCDC144A-209ENST00000436374 CCDC152Q4G0S7 254 aa21.99■■□□□ 1.11
CCDC144A-209ENST00000436374 CENPQQ7L2Z9 268 aaPredicted RBP21.99■■□□□ 1.11
CCDC144A-209ENST00000436374 GCC1Q96CN9 775 aa21.99■■□□□ 1.11
CCDC144A-209ENST00000436374 NLRP3Q96P20 1036 aa21.99■■□□□ 1.11
CCDC144A-209ENST00000436374 PRELPP51888 382 aa21.98■■□□□ 1.11
CCDC144A-209ENST00000436374 CTSWP56202 376 aa21.98■■□□□ 1.11
CCDC144A-209ENST00000436374 RASSF7Q02833 373 aa21.98■■□□□ 1.11
CCDC144A-209ENST00000436374 SSH3Q8TE77 659 aa21.98■■□□□ 1.11
CCDC144A-209ENST00000436374 BRIP1Q9BX63 1249 aa21.98■■□□□ 1.11
CCDC144A-209ENST00000436374 FAM177BA6PVY3 158 aa21.97■■□□□ 1.11
CCDC144A-209ENST00000436374 CSF1RP07333 972 aa21.97■■□□□ 1.11
CCDC144A-209ENST00000436374 NMRK2Q9NPI5 230 aa21.97■■□□□ 1.11
CCDC144A-209ENST00000436374 CACNA1SQ13698 1873 aa21.96■■□□□ 1.11
CCDC144A-209ENST00000436374 FOXO4P98177 505 aa21.96■■□□□ 1.11
CCDC144A-209ENST00000436374 CCDC57Q2TAC2 916 aa21.96■■□□□ 1.11
CCDC144A-209ENST00000436374 RTL5Q5HYW3 569 aaPredicted RBP21.96■■□□□ 1.11
CCDC144A-209ENST00000436374 LMBR1LQ6UX01 489 aa21.96■■□□□ 1.11
CCDC144A-209ENST00000436374 TTLL6Q8N841 843 aa21.96■■□□□ 1.11
CCDC144A-209ENST00000436374 ZNF622Q969S3 477 aaKnown RBP eCLIP21.96■■□□□ 1.11
CCDC144A-209ENST00000436374 RNF181Q9P0P0 153 aa21.96■■□□□ 1.11
CCDC144A-209ENST00000436374 FBXO3Q9UK99 471 aa21.96■■□□□ 1.11
CCDC144A-209ENST00000436374 RTL9Q8NET4 1388 aa21.96■■□□□ 1.11
CCDC144A-209ENST00000436374 IFIT5Q13325 482 aaKnown RBP21.95■■□□□ 1.1
CCDC144A-209ENST00000436374 POLA2Q14181 598 aa21.95■■□□□ 1.1
CCDC144A-209ENST00000436374 ERFEQ4G0M1 354 aa21.95■■□□□ 1.1
CCDC144A-209ENST00000436374 KAZALD1Q96I82 304 aa21.95■■□□□ 1.1
CCDC144A-209ENST00000436374 ZBTB47Q9UFB7 747 aaPredicted RBP21.95■■□□□ 1.1
CCDC144A-209ENST00000436374 SF3B3Q15393 1217 aaKnown RBP21.94■■□□□ 1.1
CCDC144A-209ENST00000436374 NUTM1Q86Y26 1132 aa21.94■■□□□ 1.1
CCDC144A-209ENST00000436374 ERC1Q8IUD2 1116 aa21.94■■□□□ 1.1
CCDC144A-209ENST00000436374 CHMP3Q9Y3E7 222 aa21.94■■□□□ 1.1
CCDC144A-209ENST00000436374 CEP350Q5VT06 3117 aa21.93■■□□□ 1.1
CCDC144A-209ENST00000436374 ANKRD18BA2A2Z9 1011 aa21.93■■□□□ 1.1
CCDC144A-209ENST00000436374 RAB11FIP3O75154 756 aa21.93■■□□□ 1.1
CCDC144A-209ENST00000436374 SLX4Q8IY92 1834 aa21.93■■□□□ 1.1
CCDC144A-209ENST00000436374 TTLL11Q8NHH1 800 aa21.93■■□□□ 1.1
CCDC144A-209ENST00000436374 FER1L6Q2WGJ9 1857 aa21.92■■□□□ 1.1
CCDC144A-209ENST00000436374 HCLS1P14317 486 aaPredicted RBP21.92■■□□□ 1.1
CCDC144A-209ENST00000436374 TAF7LQ5H9L4 462 aa21.92■■□□□ 1.1
CCDC144A-209ENST00000436374 JARID2Q92833 1246 aaPredicted RBP21.92■■□□□ 1.1
CCDC144A-209ENST00000436374 CDC5LQ99459 802 aaKnown RBP21.92■■□□□ 1.1
CCDC144A-209ENST00000436374 DCTPP1Q9H773 170 aa21.92■■□□□ 1.1
CCDC144A-209ENST00000436374 NFKBIEO00221 500 aa21.91■■□□□ 1.1
CCDC144A-209ENST00000436374 EPHA10Q5JZY3 1008 aa21.91■■□□□ 1.1
CCDC144A-209ENST00000436374 B4GALNT3Q6L9W6 998 aa21.91■■□□□ 1.1
CCDC144A-209ENST00000436374 SIRT2Q8IXJ6 389 aa21.91■■□□□ 1.1
CCDC144A-209ENST00000436374 COPRSQ9NQ92 184 aa21.91■■□□□ 1.1
CCDC144A-209ENST00000436374 PNMA6EA0A0J9YXQ4 647 aa21.9■■□□□ 1.1
CCDC144A-209ENST00000436374 HSPA6P17066 643 aa21.9■■□□□ 1.1
CCDC144A-209ENST00000436374 CNKSR1Q969H4 720 aa21.9■■□□□ 1.1
CCDC144A-209ENST00000436374 NOP58Q9Y2X3 529 aaKnown RBP21.9■■□□□ 1.1
CCDC144A-209ENST00000436374 TIAM2Q8IVF5 1701 aa21.89■■□□□ 1.1
CCDC144A-209ENST00000436374 G3BP1Q13283 466 aaKnown RBP eCLIP21.89■■□□□ 1.09
CCDC144A-209ENST00000436374 DDX46Q7L014 1031 aaKnown RBP21.89■■□□□ 1.09
CCDC144A-209ENST00000436374 SMC5Q8IY18 1101 aa21.89■■□□□ 1.09
CCDC144A-209ENST00000436374 ZNF219Q9P2Y4 722 aaPredicted RBP21.89■■□□□ 1.09
CCDC144A-209ENST00000436374 LAMB2P55268 1798 aa21.89■■□□□ 1.09
CCDC144A-209ENST00000436374 KDM2BQ8NHM5 1336 aa21.88■■□□□ 1.09
CCDC144A-209ENST00000436374 KLRG2A4D1S0 409 aaPredicted RBP21.88■■□□□ 1.09
CCDC144A-209ENST00000436374 CIAO1O76071 339 aa21.88■■□□□ 1.09
CCDC144A-209ENST00000436374 SRGNP10124 158 aa21.88■■□□□ 1.09
CCDC144A-209ENST00000436374 ITGA6P23229 1130 aa21.88■■□□□ 1.09
CCDC144A-209ENST00000436374 SYNE4Q8N205 404 aa21.88■■□□□ 1.09
CCDC144A-209ENST00000436374 MASTLQ96GX5 879 aa21.88■■□□□ 1.09
CCDC144A-209ENST00000436374 DICER1Q9UPY3 1922 aaKnown RBP21.88■■□□□ 1.09
CCDC144A-209ENST00000436374 ABCC12Q96J65 1359 aa21.87■■□□□ 1.09
CCDC144A-209ENST00000436374 C21orf2O43822 256 aa21.87■■□□□ 1.09
CCDC144A-209ENST00000436374 SURF6O75683 361 aaKnown RBP21.87■■□□□ 1.09
CCDC144A-209ENST00000436374 TOMM70O94826 608 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms