RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 GSDMDP57764 484 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 GNG11P61952 73 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 BRF1Q92994 677 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 PRAM1Q96QH2 718 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 PARD6BQ9BYG5 372 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 ABCA6Q8N139 1617 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 ABCA8O94911 1581 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 N4BP1O75113 896 aaKnown RBP8.68□□□□□ -1.02
CPSF6-202ENST00000435070 ELP1O95163 1332 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 LRRC7Q96NW7 1537 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 HSP90B1P14625 803 aaKnown RBP8.68□□□□□ -1.02
CPSF6-202ENST00000435070 PSEN1P49768 467 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 VPS53Q5VIR6 699 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 NBPF11Q86T75 865 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 FAM212AQ96EL1 285 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 SARM1Q6SZW1 724 aa8.67□□□□□ -1.02
CPSF6-202ENST00000435070 DHX40Q8IX18 779 aaKnown RBP8.67□□□□□ -1.02
CPSF6-202ENST00000435070 RABEP2Q9H5N1 569 aa8.67□□□□□ -1.02
CPSF6-202ENST00000435070 SUGCTQ9HAC7 445 aa8.67□□□□□ -1.02
CPSF6-202ENST00000435070 IBSPP21815 317 aaPredicted RBP8.67□□□□□ -1.02
CPSF6-202ENST00000435070 ME1P48163 572 aa8.67□□□□□ -1.02
CPSF6-202ENST00000435070 CCT4P50991 539 aaKnown RBP8.67□□□□□ -1.02
CPSF6-202ENST00000435070 ATP8B2P98198 1209 aa8.67□□□□□ -1.02
CPSF6-202ENST00000435070 ANO10Q9NW15 660 aa8.67□□□□□ -1.02
CPSF6-202ENST00000435070 MICALL1Q8N3F8 863 aa8.67□□□□□ -1.02
CPSF6-202ENST00000435070 CCDC102AQ96A19 550 aa8.67□□□□□ -1.02
CPSF6-202ENST00000435070 TAF6LQ9Y6J9 622 aa8.67□□□□□ -1.02
CPSF6-202ENST00000435070 TRPM2O94759 1503 aa8.67□□□□□ -1.02
CPSF6-202ENST00000435070 FANCGO15287 622 aa8.67□□□□□ -1.02
CPSF6-202ENST00000435070 LRRC2Q9BYS8 371 aa8.67□□□□□ -1.02
CPSF6-202ENST00000435070 CDC42BPBQ9Y5S2 1711 aa8.67□□□□□ -1.02
CPSF6-202ENST00000435070 TTC21AQ8NDW8 1320 aa8.67□□□□□ -1.02
CPSF6-202ENST00000435070 LONRF2Q1L5Z9 754 aa8.67□□□□□ -1.02
CPSF6-202ENST00000435070 NME9Q86XW9 330 aa8.67□□□□□ -1.02
CPSF6-202ENST00000435070 FAN1Q9Y2M0 1017 aa8.67□□□□□ -1.02
CPSF6-202ENST00000435070 SSH2Q76I76 1423 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 RIMS2Q9UQ26 1411 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 HDGFP51858 240 aaKnown RBP8.66□□□□□ -1.02
CPSF6-202ENST00000435070 FSIP1Q8NA03 581 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 EXOC4Q96A65 974 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 STK31Q9BXU1 1019 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 STAP2Q9UGK3 403 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 PUF60Q9UHX1 559 aaKnown RBP8.66□□□□□ -1.02
CPSF6-202ENST00000435070 RBM8AQ9Y5S9 174 aaKnown RBP8.66□□□□□ -1.02
CPSF6-202ENST00000435070 COL3A1P02461 1466 aaPredicted RBP8.66□□□□□ -1.02
CPSF6-202ENST00000435070 MYOM2P54296 1465 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 PATL2C9JE40 543 aaKnown RBP8.66□□□□□ -1.02
CPSF6-202ENST00000435070 MAGEA9P43362 315 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 GOLPH3LQ9H4A5 285 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 RNF216Q9NWF9 866 aaPredicted RBP8.66□□□□□ -1.02
CPSF6-202ENST00000435070 TSPYL4Q9UJ04 414 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 KIF24Q5T7B8 1368 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 IL13P35225 146 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 FUT8Q9BYC5 575 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 LRRFIP1Q32MZ4 808 aaKnown RBP8.66□□□□□ -1.02
CPSF6-202ENST00000435070 CCDC158Q5M9N0 1113 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 CCDC30Q5VVM6 783 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 BLOC1S2Q6QNY1 142 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 RBM43Q6ZSC3 357 aaKnown RBP8.66□□□□□ -1.02
CPSF6-202ENST00000435070 PPP1R42Q7Z4L9 355 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 PDILTQ8N807 584 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 RHPN1Q8TCX5 695 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 CFAP65Q6ZU64 1925 aaKnown RBP8.66□□□□□ -1.02
CPSF6-202ENST00000435070 EFCAB8A8MWE9 144 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 UBTFL1P0CB47 393 aaPredicted RBP8.66□□□□□ -1.02
CPSF6-202ENST00000435070 PPP2R3AQ06190 1150 aa8.66□□□□□ -1.02
CPSF6-202ENST00000435070 SRGAP3O43295 1099 aa8.65□□□□□ -1.02
CPSF6-202ENST00000435070 KARSQ15046 597 aaKnown RBP8.65□□□□□ -1.02
CPSF6-202ENST00000435070 DPCR1Q3MIW9 517 aa8.65□□□□□ -1.02
CPSF6-202ENST00000435070 WDR24Q96S15 920 aa8.65□□□□□ -1.02
CPSF6-202ENST00000435070 ZSWIM6Q9HCJ5 1215 aa8.65□□□□□ -1.02
CPSF6-202ENST00000435070 A0A1B0GVL5 298 aa8.65□□□□□ -1.02
CPSF6-202ENST00000435070 ATP2B1P20020 1258 aa8.65□□□□□ -1.02
CPSF6-202ENST00000435070 DNAJC21Q5F1R6 531 aaKnown RBP8.65□□□□□ -1.02
CPSF6-202ENST00000435070 KRI1Q8N9T8 703 aaKnown RBP8.65□□□□□ -1.02
CPSF6-202ENST00000435070 CDK19Q9BWU1 502 aa8.65□□□□□ -1.02
CPSF6-202ENST00000435070 MNAT1P51948 309 aa8.65□□□□□ -1.02
CPSF6-202ENST00000435070 PI4K2BQ8TCG2 481 aa8.65□□□□□ -1.02
CPSF6-202ENST00000435070 KIAA0232Q92628 1395 aa8.65□□□□□ -1.02
CPSF6-202ENST00000435070 FOXO3O43524 673 aa8.65□□□□□ -1.02
CPSF6-202ENST00000435070 ATP1A3P13637 1013 aa8.65□□□□□ -1.02
CPSF6-202ENST00000435070 TSGA10IPQ3SY00 556 aa8.65□□□□□ -1.02
CPSF6-202ENST00000435070 CREB3L3Q68CJ9 461 aa8.65□□□□□ -1.02
CPSF6-202ENST00000435070 FAM227BQ96M60 508 aa8.65□□□□□ -1.02
CPSF6-202ENST00000435070 PARP3Q9Y6F1 533 aa8.65□□□□□ -1.02
CPSF6-202ENST00000435070 PSDA5PKW4 1024 aaPredicted RBP8.65□□□□□ -1.03
CPSF6-202ENST00000435070 NBPF6Q5VWK0 638 aa8.65□□□□□ -1.03
CPSF6-202ENST00000435070 NBPF4Q96M43 638 aa8.65□□□□□ -1.03
CPSF6-202ENST00000435070 CAVIN2O95810 425 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 CCDC150Q8NCX0 1101 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 KCNG1Q9UIX4 513 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 MAP3K4Q9Y6R4 1608 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 PLEKHG2Q9H7P9 1386 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 IVLP07476 585 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 NAT10Q9H0A0 1025 aaKnown RBP8.64□□□□□ -1.03
CPSF6-202ENST00000435070 CLGNO14967 610 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 CFAP100Q494V2 611 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 TRIM65Q6PJ69 517 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 RUFY2Q8WXA3 655 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 IRX2Q9BZI1 471 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms