RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 NLRP10Q86W26 655 aa17.49■□□□□ 0.39
CDC42EP1-204ENST00000434728 SP8Q8IXZ3 490 aa17.49■□□□□ 0.39
CDC42EP1-204ENST00000434728 RAD17O75943 681 aa17.48■□□□□ 0.39
CDC42EP1-204ENST00000434728 HSPA8P11142 646 aaKnown RBP17.48■□□□□ 0.39
CDC42EP1-204ENST00000434728 GMPSP49915 693 aaPredicted RBP17.48■□□□□ 0.39
CDC42EP1-204ENST00000434728 CXCL9Q07325 125 aa17.48■□□□□ 0.39
CDC42EP1-204ENST00000434728 WDR43Q15061 677 aaKnown RBP eCLIP17.48■□□□□ 0.39
CDC42EP1-204ENST00000434728 CYP4F22Q6NT55 531 aa17.48■□□□□ 0.39
CDC42EP1-204ENST00000434728 LRP10Q7Z4F1 713 aa17.48■□□□□ 0.39
CDC42EP1-204ENST00000434728 GPR101Q96P66 508 aaPredicted RBP17.48■□□□□ 0.39
CDC42EP1-204ENST00000434728 ZNF408Q9H9D4 720 aa17.48■□□□□ 0.39
CDC42EP1-204ENST00000434728 CELF2O95319 508 aaKnown RBP17.47■□□□□ 0.39
CDC42EP1-204ENST00000434728 TCIRG1Q13488 830 aa17.47■□□□□ 0.39
CDC42EP1-204ENST00000434728 GRAPQ13588 217 aa17.47■□□□□ 0.39
CDC42EP1-204ENST00000434728 CCDC146Q8IYE0 955 aa17.47■□□□□ 0.39
CDC42EP1-204ENST00000434728 GRAPLQ8TC17 118 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP1-204ENST00000434728 ZNF428Q96B54 188 aa17.47■□□□□ 0.39
CDC42EP1-204ENST00000434728 RTFDC1Q9BY42 306 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP1-204ENST00000434728 KIAA2012Q0VF49 1180 aa17.46■□□□□ 0.39
CDC42EP1-204ENST00000434728 HDGFL1Q5TGJ6 251 aa17.46■□□□□ 0.39
CDC42EP1-204ENST00000434728 TMC4Q7Z404 712 aa17.46■□□□□ 0.39
CDC42EP1-204ENST00000434728 TLL2Q9Y6L7 1015 aa17.46■□□□□ 0.39
CDC42EP1-204ENST00000434728 CDHR2Q9BYE9 1310 aa17.46■□□□□ 0.38
CDC42EP1-204ENST00000434728 CHPF2Q9P2E5 772 aa17.45■□□□□ 0.38
CDC42EP1-204ENST00000434728 TAF1P21675 1872 aa17.44■□□□□ 0.38
CDC42EP1-204ENST00000434728 H7C1D1 291 aa17.44■□□□□ 0.38
CDC42EP1-204ENST00000434728 CST9Q5W186 159 aa17.44■□□□□ 0.38
CDC42EP1-204ENST00000434728 GLIS2Q9BZE0 524 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP1-204ENST00000434728 KRT24Q2M2I5 525 aa17.43■□□□□ 0.38
CDC42EP1-204ENST00000434728 ABHD8Q96I13 439 aa17.43■□□□□ 0.38
CDC42EP1-204ENST00000434728 MYBBP1AQ9BQG0 1328 aaKnown RBP17.43■□□□□ 0.38
CDC42EP1-204ENST00000434728 THSD7BQ9C0I4 1608 aa17.43■□□□□ 0.38
CDC42EP1-204ENST00000434728 C6orf229H3BNL8 230 aa17.42■□□□□ 0.38
CDC42EP1-204ENST00000434728 AOC2O75106 756 aa17.42■□□□□ 0.38
CDC42EP1-204ENST00000434728 MAP2K2P36507 400 aa17.42■□□□□ 0.38
CDC42EP1-204ENST00000434728 WASHC4Q2M389 1173 aa17.42■□□□□ 0.38
CDC42EP1-204ENST00000434728 ANKRD13DQ6ZTN6 518 aa17.42■□□□□ 0.38
CDC42EP1-204ENST00000434728 PLBD2Q8NHP8 589 aa17.42■□□□□ 0.38
CDC42EP1-204ENST00000434728 RUNDC1Q96C34 613 aa17.42■□□□□ 0.38
CDC42EP1-204ENST00000434728 DBF4Q9UBU7 674 aaPredicted RBP17.42■□□□□ 0.38
CDC42EP1-204ENST00000434728 CNOT7Q9UIV1 285 aaKnown RBP17.42■□□□□ 0.38
CDC42EP1-204ENST00000434728 NSFL1CQ9UNZ2 370 aaKnown RBP17.42■□□□□ 0.38
CDC42EP1-204ENST00000434728 CHL1O00533 1208 aa17.41■□□□□ 0.38
CDC42EP1-204ENST00000434728 RTL5Q5HYW3 569 aaPredicted RBP17.41■□□□□ 0.38
CDC42EP1-204ENST00000434728 CDC37L1Q7L3B6 337 aa17.41■□□□□ 0.38
CDC42EP1-204ENST00000434728 SAPCD2Q86UD0 394 aa17.41■□□□□ 0.38
CDC42EP1-204ENST00000434728 MICALL2Q8IY33 904 aa17.41■□□□□ 0.38
CDC42EP1-204ENST00000434728 ZC3H15Q8WU90 426 aaKnown RBP17.41■□□□□ 0.38
CDC42EP1-204ENST00000434728 FAM89AQ96GI7 184 aa17.41■□□□□ 0.38
CDC42EP1-204ENST00000434728 TSKSQ9UJT2 592 aa17.41■□□□□ 0.38
CDC42EP1-204ENST00000434728 ATP5J2-PTCD1G3V325 749 aa17.4■□□□□ 0.38
CDC42EP1-204ENST00000434728 G3V3G9 751 aa17.4■□□□□ 0.38
CDC42EP1-204ENST00000434728 HOXB7P09629 217 aa17.4■□□□□ 0.38
CDC42EP1-204ENST00000434728 DCAF8Q5TAQ9 597 aa17.4■□□□□ 0.38
CDC42EP1-204ENST00000434728 TRPM4Q8TD43 1214 aa17.4■□□□□ 0.38
CDC42EP1-204ENST00000434728 EYA3Q99504 573 aa17.4■□□□□ 0.38
CDC42EP1-204ENST00000434728 HYPKQ9NX55 129 aa17.4■□□□□ 0.38
CDC42EP1-204ENST00000434728 DDX60Q8IY21 1712 aaKnown RBP17.4■□□□□ 0.38
CDC42EP1-204ENST00000434728 LRRC37AA6NMS7 1700 aa17.39■□□□□ 0.37
CDC42EP1-204ENST00000434728 RIMBP2O15034 1052 aa17.39■□□□□ 0.37
CDC42EP1-204ENST00000434728 CA12O43570 354 aa17.39■□□□□ 0.37
CDC42EP1-204ENST00000434728 DBNDD1Q9H9R9 158 aa17.39■□□□□ 0.37
CDC42EP1-204ENST00000434728 CCDC85CA6NKD9 419 aa17.38■□□□□ 0.37
CDC42EP1-204ENST00000434728 YDJCA8MPS7 323 aa17.38■□□□□ 0.37
CDC42EP1-204ENST00000434728 HSP90B1P14625 803 aaKnown RBP17.38■□□□□ 0.37
CDC42EP1-204ENST00000434728 GOLGA2Q08379 1002 aa17.38■□□□□ 0.37
CDC42EP1-204ENST00000434728 DDX10Q13206 875 aaKnown RBP17.38■□□□□ 0.37
CDC42EP1-204ENST00000434728 ZBTB12Q9Y330 459 aaPredicted RBP17.38■□□□□ 0.37
CDC42EP1-204ENST00000434728 DUOX1Q9NRD9 1551 aa17.37■□□□□ 0.37
CDC42EP1-204ENST00000434728 PSMD14O00487 310 aa17.37■□□□□ 0.37
CDC42EP1-204ENST00000434728 IRS4O14654 1257 aaPredicted RBP17.37■□□□□ 0.37
CDC42EP1-204ENST00000434728 HIRAP54198 1017 aaPredicted RBP17.37■□□□□ 0.37
CDC42EP1-204ENST00000434728 DUSP27Q5VZP5 1158 aa17.37■□□□□ 0.37
CDC42EP1-204ENST00000434728 RIC3Q7Z5B4 369 aa17.37■□□□□ 0.37
CDC42EP1-204ENST00000434728 USP48Q86UV5 1035 aa17.37■□□□□ 0.37
CDC42EP1-204ENST00000434728 CELF1Q92879 486 aaKnown RBP17.37■□□□□ 0.37
CDC42EP1-204ENST00000434728 HHIPL1Q96JK4 782 aa17.37■□□□□ 0.37
CDC42EP1-204ENST00000434728 CFAP44Q96MT7 982 aa17.37■□□□□ 0.37
CDC42EP1-204ENST00000434728 PGAP2Q9UHJ9 254 aa17.37■□□□□ 0.37
CDC42EP1-204ENST00000434728 TRIM35Q9UPQ4 493 aa17.37■□□□□ 0.37
CDC42EP1-204ENST00000434728 SHTN1A0MZ66 631 aa17.36■□□□□ 0.37
CDC42EP1-204ENST00000434728 ECE2O60344 883 aa17.36■□□□□ 0.37
CDC42EP1-204ENST00000434728 BRPF1P55201 1214 aaPredicted RBP17.36■□□□□ 0.37
CDC42EP1-204ENST00000434728 HUNKP57058 714 aa17.36■□□□□ 0.37
CDC42EP1-204ENST00000434728 SF3B3Q15393 1217 aaKnown RBP17.36■□□□□ 0.37
CDC42EP1-204ENST00000434728 TBC1D10BQ4KMP7 808 aaPredicted RBP17.36■□□□□ 0.37
CDC42EP1-204ENST00000434728 RBM26Q5T8P6 1007 aaKnown RBP17.36■□□□□ 0.37
CDC42EP1-204ENST00000434728 KRT26Q7Z3Y9 468 aa17.36■□□□□ 0.37
CDC42EP1-204ENST00000434728 DPF2Q92785 391 aa17.36■□□□□ 0.37
CDC42EP1-204ENST00000434728 DCPSQ96C86 337 aaKnown RBP17.36■□□□□ 0.37
CDC42EP1-204ENST00000434728 ISCA1Q9BUE6 129 aa17.36■□□□□ 0.37
CDC42EP1-204ENST00000434728 ANKIB1Q9P2G1 1089 aa17.36■□□□□ 0.37
CDC42EP1-204ENST00000434728 RPS12P25398 132 aaKnown RBP17.35■□□□□ 0.37
CDC42EP1-204ENST00000434728 GPSM2P81274 684 aa17.35■□□□□ 0.37
CDC42EP1-204ENST00000434728 NOGQ13253 232 aa17.35■□□□□ 0.37
CDC42EP1-204ENST00000434728 DOK7Q18PE1 504 aa17.35■□□□□ 0.37
CDC42EP1-204ENST00000434728 FAM161AQ3B820 660 aa17.35■□□□□ 0.37
CDC42EP1-204ENST00000434728 SAMD7Q7Z3H4 446 aa17.35■□□□□ 0.37
CDC42EP1-204ENST00000434728 ZC3H12CQ9C0D7 883 aaKnown RBP17.35■□□□□ 0.37
CDC42EP1-204ENST00000434728 RPS8P62241 208 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms