RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 PLA2G12BQ9BX93 195 aa23.33■■□□□ 1.33
HLA-F-220ENST00000434407 BBOX1O75936 387 aa23.32■■□□□ 1.32
HLA-F-220ENST00000434407 PRELPP51888 382 aa23.32■■□□□ 1.32
HLA-F-220ENST00000434407 RASSF7Q02833 373 aa23.32■■□□□ 1.32
HLA-F-220ENST00000434407 CCDC93Q567U6 631 aa23.32■■□□□ 1.32
HLA-F-220ENST00000434407 UBE3BQ7Z3V4 1068 aa23.32■■□□□ 1.32
HLA-F-220ENST00000434407 GRAPQ13588 217 aa23.31■■□□□ 1.32
HLA-F-220ENST00000434407 CC2D2BQ6DHV5 1058 aa23.31■■□□□ 1.32
HLA-F-220ENST00000434407 OLFM4Q6UX06 510 aa23.31■■□□□ 1.32
HLA-F-220ENST00000434407 GRAPLQ8TC17 118 aaPredicted RBP23.31■■□□□ 1.32
HLA-F-220ENST00000434407 SRCIN1Q9C0H9 1055 aa23.31■■□□□ 1.32
HLA-F-220ENST00000434407 PPEF1O14829 653 aaPredicted RBP23.3■■□□□ 1.32
HLA-F-220ENST00000434407 C9orf131Q5VYM1 1079 aa23.3■■□□□ 1.32
HLA-F-220ENST00000434407 SLC4A10Q6U841 1118 aa23.3■■□□□ 1.32
HLA-F-220ENST00000434407 RTKN2Q8IZC4 609 aa23.3■■□□□ 1.32
HLA-F-220ENST00000434407 NOB1Q9ULX3 412 aaKnown RBP23.3■■□□□ 1.32
HLA-F-220ENST00000434407 COL4A1P02462 1669 aa23.29■■□□□ 1.32
HLA-F-220ENST00000434407 LMNB1P20700 586 aa23.29■■□□□ 1.32
HLA-F-220ENST00000434407 CCDC152Q4G0S7 254 aa23.29■■□□□ 1.32
HLA-F-220ENST00000434407 GRIPAP1Q4V328 841 aa23.29■■□□□ 1.32
HLA-F-220ENST00000434407 ARHGAP45Q92619 1136 aa23.29■■□□□ 1.32
HLA-F-220ENST00000434407 ATP6V0A2Q9Y487 856 aa23.29■■□□□ 1.32
HLA-F-220ENST00000434407 LRRC37AA6NMS7 1700 aa23.28■■□□□ 1.32
HLA-F-220ENST00000434407 CTSWP56202 376 aa23.28■■□□□ 1.32
HLA-F-220ENST00000434407 TMC4Q7Z404 712 aa23.28■■□□□ 1.32
HLA-F-220ENST00000434407 TTLL11Q8NHH1 800 aa23.28■■□□□ 1.32
HLA-F-220ENST00000434407 TAOK3Q9H2K8 898 aa23.28■■□□□ 1.32
HLA-F-220ENST00000434407 KIF16BQ96L93 1317 aa23.28■■□□□ 1.32
HLA-F-220ENST00000434407 RTL9Q8NET4 1388 aa23.27■■□□□ 1.32
HLA-F-220ENST00000434407 GRM8O00222 908 aa23.27■■□□□ 1.32
HLA-F-220ENST00000434407 SLC51AQ86UW1 340 aa23.27■■□□□ 1.32
HLA-F-220ENST00000434407 SP8Q8IXZ3 490 aa23.27■■□□□ 1.32
HLA-F-220ENST00000434407 CELF1Q92879 486 aaKnown RBP23.27■■□□□ 1.32
HLA-F-220ENST00000434407 UTYO14607 1347 aa23.27■■□□□ 1.32
HLA-F-220ENST00000434407 BCAR3O75815 825 aa23.26■■□□□ 1.31
HLA-F-220ENST00000434407 CSF1RP07333 972 aa23.26■■□□□ 1.31
HLA-F-220ENST00000434407 FKBP4Q02790 459 aaKnown RBP eCLIP23.26■■□□□ 1.31
HLA-F-220ENST00000434407 CNKSR2Q8WXI2 1034 aa23.26■■□□□ 1.31
HLA-F-220ENST00000434407 PSMD1Q99460 953 aa23.26■■□□□ 1.31
HLA-F-220ENST00000434407 API5Q9BZZ5 524 aaKnown RBP23.26■■□□□ 1.31
HLA-F-220ENST00000434407 RNF181Q9P0P0 153 aa23.26■■□□□ 1.31
HLA-F-220ENST00000434407 RPS8P62241 208 aaKnown RBP23.25■■□□□ 1.31
HLA-F-220ENST00000434407 ZNF784Q8NCA9 323 aaPredicted RBP23.25■■□□□ 1.31
HLA-F-220ENST00000434407 SEC31BQ9NQW1 1179 aa23.25■■□□□ 1.31
HLA-F-220ENST00000434407 C9orf78Q9NZ63 289 aaPredicted RBP23.24■■□□□ 1.31
HLA-F-220ENST00000434407 ZC3H4Q9UPT8 1303 aaKnown RBP23.24■■□□□ 1.31
HLA-F-220ENST00000434407 FOXO4P98177 505 aa23.23■■□□□ 1.31
HLA-F-220ENST00000434407 TIAM2Q8IVF5 1701 aa23.22■■□□□ 1.31
HLA-F-220ENST00000434407 RTFDC1Q9BY42 306 aaPredicted RBP23.22■■□□□ 1.31
HLA-F-220ENST00000434407 GREM2Q9H772 168 aa23.22■■□□□ 1.31
HLA-F-220ENST00000434407 IPO8O15397 1037 aaKnown RBP23.21■■□□□ 1.31
HLA-F-220ENST00000434407 CCT4P50991 539 aaKnown RBP23.21■■□□□ 1.31
HLA-F-220ENST00000434407 CCDC85AQ96PX6 553 aaPredicted RBP23.21■■□□□ 1.31
HLA-F-220ENST00000434407 USP44Q9H0E7 712 aa23.21■■□□□ 1.31
HLA-F-220ENST00000434407 LTBP1Q14766 1721 aa23.21■■□□□ 1.31
HLA-F-220ENST00000434407 NBPF7P0C2Y1 421 aaPredicted RBP23.2■■□□□ 1.3
HLA-F-220ENST00000434407 KAZALD1Q96I82 304 aa23.2■■□□□ 1.3
HLA-F-220ENST00000434407 TMX4Q9H1E5 349 aaPredicted RBP23.2■■□□□ 1.3
HLA-F-220ENST00000434407 ZNF277Q9NRM2 450 aaPredicted RBP23.2■■□□□ 1.3
HLA-F-220ENST00000434407 TRIM27P14373 513 aa23.19■■□□□ 1.3
HLA-F-220ENST00000434407 EPHA10Q5JZY3 1008 aa23.19■■□□□ 1.3
HLA-F-220ENST00000434407 ATF7IPQ6VMQ6 1270 aa23.19■■□□□ 1.3
HLA-F-220ENST00000434407 CDC5LQ99459 802 aaKnown RBP23.19■■□□□ 1.3
HLA-F-220ENST00000434407 SPEF2Q9C093 1822 aa23.19■■□□□ 1.3
HLA-F-220ENST00000434407 INTS3Q68E01 1043 aaKnown RBP23.18■■□□□ 1.3
HLA-F-220ENST00000434407 ANKRD18AQ8IVF6 992 aa23.18■■□□□ 1.3
HLA-F-220ENST00000434407 MPNDQ8N594 471 aa23.18■■□□□ 1.3
HLA-F-220ENST00000434407 SUCLG2Q96I99 432 aa23.18■■□□□ 1.3
HLA-F-220ENST00000434407 DUOX1Q9NRD9 1551 aa23.18■■□□□ 1.3
HLA-F-220ENST00000434407 ITGA6P23229 1130 aa23.17■■□□□ 1.3
HLA-F-220ENST00000434407 IARSP41252 1262 aaKnown RBP23.17■■□□□ 1.3
HLA-F-220ENST00000434407 FAM161AQ3B820 660 aa23.17■■□□□ 1.3
HLA-F-220ENST00000434407 VPS33BQ9H267 617 aa23.17■■□□□ 1.3
HLA-F-220ENST00000434407 LMBR1LQ6UX01 489 aa23.16■■□□□ 1.3
HLA-F-220ENST00000434407 DPP8Q6V1X1 898 aaPredicted RBP23.16■■□□□ 1.3
HLA-F-220ENST00000434407 BSDC1Q9NW68 430 aaPredicted RBP23.16■■□□□ 1.3
HLA-F-220ENST00000434407 PODXL2Q9NZ53 605 aa23.16■■□□□ 1.3
HLA-F-220ENST00000434407 RABL6Q3YEC7 729 aaPredicted RBP23.15■■□□□ 1.3
HLA-F-220ENST00000434407 ZKSCAN2Q63HK3 967 aa23.15■■□□□ 1.3
HLA-F-220ENST00000434407 SUPT20HQ8NEM7 779 aa23.15■■□□□ 1.3
HLA-F-220ENST00000434407 FRAT1Q92837 279 aaPredicted RBP23.15■■□□□ 1.3
HLA-F-220ENST00000434407 RNF216Q9NWF9 866 aaPredicted RBP23.15■■□□□ 1.3
HLA-F-220ENST00000434407 TNNQ9UQP3 1299 aa23.15■■□□□ 1.3
HLA-F-220ENST00000434407 COL4A5P29400 1685 aa23.15■■□□□ 1.3
HLA-F-220ENST00000434407 GPSM2P81274 684 aa23.14■■□□□ 1.29
HLA-F-220ENST00000434407 RNF39Q9H2S5 420 aa23.14■■□□□ 1.29
HLA-F-220ENST00000434407 BICC1Q9H694 974 aaKnown RBP23.13■■□□□ 1.29
HLA-F-220ENST00000434407 ANKRD18BA2A2Z9 1011 aa23.12■■□□□ 1.29
HLA-F-220ENST00000434407 GLTPD2A6NH11 291 aa23.12■■□□□ 1.29
HLA-F-220ENST00000434407 FZD9O00144 591 aa23.12■■□□□ 1.29
HLA-F-220ENST00000434407 IFIT5Q13325 482 aaKnown RBP23.12■■□□□ 1.29
HLA-F-220ENST00000434407 ANKRD44Q8N8A2 993 aa23.12■■□□□ 1.29
HLA-F-220ENST00000434407 POLLQ9UGP5 575 aa23.12■■□□□ 1.29
HLA-F-220ENST00000434407 MINPP1Q9UNW1 487 aa23.12■■□□□ 1.29
HLA-F-220ENST00000434407 NSFL1CQ9UNZ2 370 aaKnown RBP23.12■■□□□ 1.29
HLA-F-220ENST00000434407 IGHMBP2P38935 993 aaKnown RBP23.11■■□□□ 1.29
HLA-F-220ENST00000434407 KIAA2012Q0VF49 1180 aa23.11■■□□□ 1.29
HLA-F-220ENST00000434407 LARGE2Q8N3Y3 721 aa23.1■■□□□ 1.29
HLA-F-220ENST00000434407 GPBP1L1Q9HC44 474 aaPredicted RBP23.1■■□□□ 1.29
HLA-F-220ENST00000434407 PPIP5K2O43314 1243 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms