RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 WDR90Q96KV7 1748 aa16.87■□□□□ 0.29
TRAPPC4-202ENST00000434101 DIEXFQ68CQ4 756 aaKnown RBP16.87■□□□□ 0.29
TRAPPC4-202ENST00000434101 SP8Q8IXZ3 490 aa16.87■□□□□ 0.29
TRAPPC4-202ENST00000434101 JDP2Q8WYK2 163 aa16.87■□□□□ 0.29
TRAPPC4-202ENST00000434101 PDE8AO60658 829 aa16.86■□□□□ 0.29
TRAPPC4-202ENST00000434101 VEGFAP15692 232 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC4-202ENST00000434101 SUPT20HQ8NEM7 779 aa16.86■□□□□ 0.29
TRAPPC4-202ENST00000434101 DNAAF4Q8WXU2 420 aa16.86■□□□□ 0.29
TRAPPC4-202ENST00000434101 CDHR2Q9BYE9 1310 aa16.86■□□□□ 0.29
TRAPPC4-202ENST00000434101 LRRC37AA6NMS7 1700 aa16.85■□□□□ 0.29
TRAPPC4-202ENST00000434101 NEURL1BA8MQ27 555 aa16.85■□□□□ 0.29
TRAPPC4-202ENST00000434101 IGKV5-2P06315 115 aa16.85■□□□□ 0.29
TRAPPC4-202ENST00000434101 CCDC152Q4G0S7 254 aa16.85■□□□□ 0.29
TRAPPC4-202ENST00000434101 RBM46Q8TBY0 533 aaKnown RBP16.85■□□□□ 0.29
TRAPPC4-202ENST00000434101 VPS33BQ9H267 617 aa16.85■□□□□ 0.29
TRAPPC4-202ENST00000434101 SCN4AP35499 1836 aa16.84■□□□□ 0.29
TRAPPC4-202ENST00000434101 MPNDQ8N594 471 aa16.84■□□□□ 0.29
TRAPPC4-202ENST00000434101 SLFN5Q08AF3 891 aa16.83■□□□□ 0.28
TRAPPC4-202ENST00000434101 CWF19L2Q2TBE0 894 aaKnown RBP16.83■□□□□ 0.28
TRAPPC4-202ENST00000434101 DPP8Q6V1X1 898 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC4-202ENST00000434101 LARGE2Q8N3Y3 721 aa16.83■□□□□ 0.28
TRAPPC4-202ENST00000434101 LINS1Q8NG48 757 aa16.83■□□□□ 0.28
TRAPPC4-202ENST00000434101 FZD9O00144 591 aa16.82■□□□□ 0.28
TRAPPC4-202ENST00000434101 PPIP5K2O43314 1243 aa16.82■□□□□ 0.28
TRAPPC4-202ENST00000434101 DDNO94850 711 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC4-202ENST00000434101 RPS8P62241 208 aaKnown RBP16.82■□□□□ 0.28
TRAPPC4-202ENST00000434101 JARID2Q92833 1246 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC4-202ENST00000434101 CELF1Q92879 486 aaKnown RBP16.82■□□□□ 0.28
TRAPPC4-202ENST00000434101 RTFDC1Q9BY42 306 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC4-202ENST00000434101 EIF6P56537 245 aaKnown RBP16.81■□□□□ 0.28
TRAPPC4-202ENST00000434101 FSTL1Q12841 308 aa16.81■□□□□ 0.28
TRAPPC4-202ENST00000434101 GCKRQ14397 625 aa16.81■□□□□ 0.28
TRAPPC4-202ENST00000434101 NIM1KQ8IY84 436 aa16.81■□□□□ 0.28
TRAPPC4-202ENST00000434101 ZNF541Q9H0D2 1346 aa16.8■□□□□ 0.28
TRAPPC4-202ENST00000434101 IQCA1LA6NCM1 817 aa16.8■□□□□ 0.28
TRAPPC4-202ENST00000434101 H7C1W4 665 aa16.8■□□□□ 0.28
TRAPPC4-202ENST00000434101 HSPA6P17066 643 aa16.8■□□□□ 0.28
TRAPPC4-202ENST00000434101 CTSWP56202 376 aa16.8■□□□□ 0.28
TRAPPC4-202ENST00000434101 UBE3BQ7Z3V4 1068 aa16.8■□□□□ 0.28
TRAPPC4-202ENST00000434101 SLC51AQ86UW1 340 aa16.8■□□□□ 0.28
TRAPPC4-202ENST00000434101 SMC1BQ8NDV3 1235 aa16.8■□□□□ 0.28
TRAPPC4-202ENST00000434101 L3MBTL3Q96JM7 780 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC4-202ENST00000434101 POTECB2RU33 542 aa16.79■□□□□ 0.28
TRAPPC4-202ENST00000434101 F6X3S4 739 aa16.79■□□□□ 0.28
TRAPPC4-202ENST00000434101 AOC3Q16853 763 aa16.79■□□□□ 0.28
TRAPPC4-202ENST00000434101 MIER1Q8N108 512 aa16.79■□□□□ 0.28
TRAPPC4-202ENST00000434101 CDC5LQ99459 802 aaKnown RBP16.79■□□□□ 0.28
TRAPPC4-202ENST00000434101 SEC31BQ9NQW1 1179 aa16.79■□□□□ 0.28
TRAPPC4-202ENST00000434101 COL4A5P29400 1685 aa16.78■□□□□ 0.28
TRAPPC4-202ENST00000434101 SPEF2Q9C093 1822 aa16.78■□□□□ 0.28
TRAPPC4-202ENST00000434101 KIAA2012Q0VF49 1180 aa16.78■□□□□ 0.28
TRAPPC4-202ENST00000434101 ANKRD18AQ8IVF6 992 aa16.78■□□□□ 0.28
TRAPPC4-202ENST00000434101 GPC2Q8N158 579 aa16.78■□□□□ 0.28
TRAPPC4-202ENST00000434101 CDCA7LQ96GN5 454 aa16.78■□□□□ 0.28
TRAPPC4-202ENST00000434101 PLA2G12BQ9BX93 195 aa16.78■□□□□ 0.28
TRAPPC4-202ENST00000434101 NSFL1CQ9UNZ2 370 aaKnown RBP16.78■□□□□ 0.28
TRAPPC4-202ENST00000434101 CT47B1P0C2W7 299 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC4-202ENST00000434101 BEND3Q5T5X7 828 aa16.77■□□□□ 0.28
TRAPPC4-202ENST00000434101 TTLL11Q8NHH1 800 aa16.77■□□□□ 0.28
TRAPPC4-202ENST00000434101 CCDC85AQ96PX6 553 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC4-202ENST00000434101 COL4A1P02462 1669 aa16.77■□□□□ 0.28
TRAPPC4-202ENST00000434101 DUOX1Q9NRD9 1551 aa16.77■□□□□ 0.27
TRAPPC4-202ENST00000434101 RTL9Q8NET4 1388 aa16.77■□□□□ 0.27
TRAPPC4-202ENST00000434101 LTBP1Q14766 1721 aa16.76■□□□□ 0.27
TRAPPC4-202ENST00000434101 TRMT2AQ8IZ69 625 aaKnown RBP16.76■□□□□ 0.27
TRAPPC4-202ENST00000434101 MRPL50Q8N5N7 158 aaKnown RBP16.76■□□□□ 0.27
TRAPPC4-202ENST00000434101 EYA3Q99504 573 aa16.76■□□□□ 0.27
TRAPPC4-202ENST00000434101 HACL1Q9UJ83 578 aa16.76■□□□□ 0.27
TRAPPC4-202ENST00000434101 ZNRF3Q9ULT6 936 aa16.76■□□□□ 0.27
TRAPPC4-202ENST00000434101 PTPRCP08575 1304 aa16.75■□□□□ 0.27
TRAPPC4-202ENST00000434101 C6orf229H3BNL8 230 aa16.75■□□□□ 0.27
TRAPPC4-202ENST00000434101 ALDH1L1O75891 902 aa16.75■□□□□ 0.27
TRAPPC4-202ENST00000434101 APLP1P51693 650 aa16.75■□□□□ 0.27
TRAPPC4-202ENST00000434101 CASP7P55210 303 aa16.75■□□□□ 0.27
TRAPPC4-202ENST00000434101 GPSM2P81274 684 aa16.75■□□□□ 0.27
TRAPPC4-202ENST00000434101 WASHC4Q2M389 1173 aa16.75■□□□□ 0.27
TRAPPC4-202ENST00000434101 ALDH1L2Q3SY69 923 aa16.75■□□□□ 0.27
TRAPPC4-202ENST00000434101 SLC4A10Q6U841 1118 aa16.75■□□□□ 0.27
TRAPPC4-202ENST00000434101 GJA3Q9Y6H8 435 aa16.75■□□□□ 0.27
TRAPPC4-202ENST00000434101 LMOD1P29536 600 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC4-202ENST00000434101 SSH1Q8WYL5 1049 aa16.74■□□□□ 0.27
TRAPPC4-202ENST00000434101 SRCIN1Q9C0H9 1055 aa16.74■□□□□ 0.27
TRAPPC4-202ENST00000434101 TAF1DQ9H5J8 278 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC4-202ENST00000434101 GREM2Q9H772 168 aa16.74■□□□□ 0.27
TRAPPC4-202ENST00000434101 PODXL2Q9NZ53 605 aa16.74■□□□□ 0.27
TRAPPC4-202ENST00000434101 ANKIB1Q9P2G1 1089 aa16.74■□□□□ 0.27
TRAPPC4-202ENST00000434101 BSDC1Q9NW68 430 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC4-202ENST00000434101 C9orf78Q9NZ63 289 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC4-202ENST00000434101 POLLQ9UGP5 575 aa16.73■□□□□ 0.27
TRAPPC4-202ENST00000434101 GGA1Q9UJY5 639 aa16.73■□□□□ 0.27
TRAPPC4-202ENST00000434101 XDHP47989 1333 aa16.72■□□□□ 0.27
TRAPPC4-202ENST00000434101 GRM8O00222 908 aa16.72■□□□□ 0.27
TRAPPC4-202ENST00000434101 CSF1RP07333 972 aa16.72■□□□□ 0.27
TRAPPC4-202ENST00000434101 EPHX2P34913 555 aa16.72■□□□□ 0.27
TRAPPC4-202ENST00000434101 IGHMBP2P38935 993 aaKnown RBP16.72■□□□□ 0.27
TRAPPC4-202ENST00000434101 TNIP1Q15025 636 aa16.72■□□□□ 0.27
TRAPPC4-202ENST00000434101 PNMA8AQ86V59 439 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC4-202ENST00000434101 TBC1D16Q8TBP0 767 aa16.72■□□□□ 0.27
TRAPPC4-202ENST00000434101 SMC4Q9NTJ3 1288 aa16.72■□□□□ 0.27
TRAPPC4-202ENST00000434101 UFL1O94874 794 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms