RNA–Protein interactions for RNA: ENST00000433807.5

MCF2L-215, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-215ENST00000433807 CTSWP56202 376 aa16.49■□□□□ 0.23
MCF2L-215ENST00000433807 CCDC152Q4G0S7 254 aa16.49■□□□□ 0.23
MCF2L-215ENST00000433807 DDX46Q7L014 1031 aaKnown RBP16.49■□□□□ 0.23
MCF2L-215ENST00000433807 CLUAP1Q96AJ1 413 aa16.49■□□□□ 0.23
MCF2L-215ENST00000433807 TNNQ9UQP3 1299 aa16.49■□□□□ 0.23
MCF2L-215ENST00000433807 UTRNP46939 3433 aa16.48■□□□□ 0.23
MCF2L-215ENST00000433807 FTSJ3Q8IY81 847 aaKnown RBP16.48■□□□□ 0.23
MCF2L-215ENST00000433807 DZIP1LQ8IYY4 767 aaKnown RBP16.48■□□□□ 0.23
MCF2L-215ENST00000433807 USP44Q9H0E7 712 aa16.48■□□□□ 0.23
MCF2L-215ENST00000433807 FER1L6Q2WGJ9 1857 aa16.48■□□□□ 0.23
MCF2L-215ENST00000433807 NBPF7P0C2Y1 421 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-215ENST00000433807 MS4A1P11836 297 aa16.47■□□□□ 0.23
MCF2L-215ENST00000433807 GRAPQ13588 217 aa16.47■□□□□ 0.23
MCF2L-215ENST00000433807 TTLL11Q8NHH1 800 aa16.47■□□□□ 0.23
MCF2L-215ENST00000433807 GRAPLQ8TC17 118 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-215ENST00000433807 SBF1O95248 1867 aa16.46■□□□□ 0.23
MCF2L-215ENST00000433807 CCDC88AQ3V6T2 1871 aa16.46■□□□□ 0.23
MCF2L-215ENST00000433807 BBOX1O75936 387 aa16.46■□□□□ 0.23
MCF2L-215ENST00000433807 CSF1RP07333 972 aa16.46■□□□□ 0.23
MCF2L-215ENST00000433807 SOGA3Q5TF21 947 aa16.46■□□□□ 0.23
MCF2L-215ENST00000433807 TMEM57Q8N5G2 664 aa16.46■□□□□ 0.23
MCF2L-215ENST00000433807 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-215ENST00000433807 C7orf43Q8WVR3 580 aa16.46■□□□□ 0.23
MCF2L-215ENST00000433807 SUCLG2Q96I99 432 aa16.46■□□□□ 0.23
MCF2L-215ENST00000433807 RTL9Q8NET4 1388 aa16.46■□□□□ 0.23
MCF2L-215ENST00000433807 PPEF1O14829 653 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-215ENST00000433807 C21orf2O43822 256 aa16.45■□□□□ 0.22
MCF2L-215ENST00000433807 FOXO4P98177 505 aa16.45■□□□□ 0.22
MCF2L-215ENST00000433807 TMC4Q7Z404 712 aa16.45■□□□□ 0.22
MCF2L-215ENST00000433807 CCDC85AQ96PX6 553 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-215ENST00000433807 HDAC5Q9UQL6 1122 aa16.45■□□□□ 0.22
MCF2L-215ENST00000433807 SPEF2Q9C093 1822 aa16.45■□□□□ 0.22
MCF2L-215ENST00000433807 RLBP1P12271 317 aa16.44■□□□□ 0.22
MCF2L-215ENST00000433807 EPHA10Q5JZY3 1008 aa16.44■□□□□ 0.22
MCF2L-215ENST00000433807 CC2D2BQ6DHV5 1058 aa16.44■□□□□ 0.22
MCF2L-215ENST00000433807 ARHGAP27Q6ZUM4 889 aa16.44■□□□□ 0.22
MCF2L-215ENST00000433807 CELF1Q92879 486 aaKnown RBP16.44■□□□□ 0.22
MCF2L-215ENST00000433807 KAZALD1Q96I82 304 aa16.44■□□□□ 0.22
MCF2L-215ENST00000433807 GREM2Q9H772 168 aa16.44■□□□□ 0.22
MCF2L-215ENST00000433807 SEC31BQ9NQW1 1179 aa16.44■□□□□ 0.22
MCF2L-215ENST00000433807 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-215ENST00000433807 PLIN1O60240 522 aa16.43■□□□□ 0.22
MCF2L-215ENST00000433807 GNAI3P08754 354 aa16.43■□□□□ 0.22
MCF2L-215ENST00000433807 UBTFL1P0CB47 393 aaPredicted RBP16.43■□□□□ 0.22
MCF2L-215ENST00000433807 RPS8P62241 208 aaKnown RBP16.43■□□□□ 0.22
MCF2L-215ENST00000433807 CCDC93Q567U6 631 aa16.43■□□□□ 0.22
MCF2L-215ENST00000433807 CDC5LQ99459 802 aaKnown RBP16.43■□□□□ 0.22
MCF2L-215ENST00000433807 ATP6V0A2Q9Y487 856 aa16.43■□□□□ 0.22
MCF2L-215ENST00000433807 LRRC37AA6NMS7 1700 aa16.42■□□□□ 0.22
MCF2L-215ENST00000433807 FAM161AQ3B820 660 aa16.42■□□□□ 0.22
MCF2L-215ENST00000433807 RABL6Q3YEC7 729 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-215ENST00000433807 GRIPAP1Q4V328 841 aa16.42■□□□□ 0.22
MCF2L-215ENST00000433807 LMBR1LQ6UX01 489 aa16.42■□□□□ 0.22
MCF2L-215ENST00000433807 SP8Q8IXZ3 490 aa16.42■□□□□ 0.22
MCF2L-215ENST00000433807 MEIS3Q99687 375 aa16.42■□□□□ 0.22
MCF2L-215ENST00000433807 TMX4Q9H1E5 349 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-215ENST00000433807 BICC1Q9H694 974 aaKnown RBP16.42■□□□□ 0.22
MCF2L-215ENST00000433807 COL4A1P02462 1669 aa16.42■□□□□ 0.22
MCF2L-215ENST00000433807 DICER1Q9UPY3 1922 aaKnown RBP16.41■□□□□ 0.22
MCF2L-215ENST00000433807 ITGA6P23229 1130 aa16.41■□□□□ 0.22
MCF2L-215ENST00000433807 IFIT5Q13325 482 aaKnown RBP16.41■□□□□ 0.22
MCF2L-215ENST00000433807 ANKRD18AQ8IVF6 992 aa16.41■□□□□ 0.22
MCF2L-215ENST00000433807 ITPRIPQ8IWB1 547 aa16.41■□□□□ 0.22
MCF2L-215ENST00000433807 RTKN2Q8IZC4 609 aa16.41■□□□□ 0.22
MCF2L-215ENST00000433807 ANKRD44Q8N8A2 993 aa16.41■□□□□ 0.22
MCF2L-215ENST00000433807 PANK1Q8TE04 598 aa16.41■□□□□ 0.22
MCF2L-215ENST00000433807 CHMP3Q9Y3E7 222 aa16.41■□□□□ 0.22
MCF2L-215ENST00000433807 SNED1Q8TER0 1413 aa16.4■□□□□ 0.22
MCF2L-215ENST00000433807 ANKRD18BA2A2Z9 1011 aa16.4■□□□□ 0.22
MCF2L-215ENST00000433807 PDE3AQ14432 1141 aa16.4■□□□□ 0.22
MCF2L-215ENST00000433807 CCDC57Q2TAC2 916 aa16.4■□□□□ 0.22
MCF2L-215ENST00000433807 OLFM4Q6UX06 510 aa16.4■□□□□ 0.22
MCF2L-215ENST00000433807 LTBP3Q9NS15 1303 aa16.4■□□□□ 0.22
MCF2L-215ENST00000433807 IGHMBP2P38935 993 aaKnown RBP16.39■□□□□ 0.21
MCF2L-215ENST00000433807 TAOK3Q9H2K8 898 aa16.39■□□□□ 0.21
MCF2L-215ENST00000433807 LRRFIP2Q9Y608 721 aaKnown RBP16.39■□□□□ 0.21
MCF2L-215ENST00000433807 NFKBIEO00221 500 aa16.38■□□□□ 0.21
MCF2L-215ENST00000433807 GNAI2P04899 355 aa16.38■□□□□ 0.21
MCF2L-215ENST00000433807 RRP1P56182 461 aaKnown RBP16.38■□□□□ 0.21
MCF2L-215ENST00000433807 RASSF7Q02833 373 aa16.38■□□□□ 0.21
MCF2L-215ENST00000433807 MVPQ14764 893 aaKnown RBP16.38■□□□□ 0.21
MCF2L-215ENST00000433807 BSDC1Q9NW68 430 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-215ENST00000433807 ZBTB7BO15156 539 aaPredicted RBP16.37■□□□□ 0.21
MCF2L-215ENST00000433807 FKBP4Q02790 459 aaKnown RBP eCLIP16.37■□□□□ 0.21
MCF2L-215ENST00000433807 SLC51AQ86UW1 340 aa16.37■□□□□ 0.21
MCF2L-215ENST00000433807 PSMD1Q99460 953 aa16.37■□□□□ 0.21
MCF2L-215ENST00000433807 MPHOSPH8Q99549 860 aa16.37■□□□□ 0.21
MCF2L-215ENST00000433807 LTBP1Q14766 1721 aa16.36■□□□□ 0.21
MCF2L-215ENST00000433807 TAF7LQ5H9L4 462 aa16.36■□□□□ 0.21
MCF2L-215ENST00000433807 C20orf194Q5TEA3 1177 aa16.36■□□□□ 0.21
MCF2L-215ENST00000433807 MPNDQ8N594 471 aa16.36■□□□□ 0.21
MCF2L-215ENST00000433807 DDX19BQ9UMR2 479 aa16.36■□□□□ 0.21
MCF2L-215ENST00000433807 COG6Q9Y2V7 657 aa16.36■□□□□ 0.21
MCF2L-215ENST00000433807 LMNB1P20700 586 aa16.35■□□□□ 0.21
MCF2L-215ENST00000433807 DPP8Q6V1X1 898 aaPredicted RBP16.35■□□□□ 0.21
MCF2L-215ENST00000433807 CHMP4BQ9H444 224 aaKnown RBP16.35■□□□□ 0.21
MCF2L-215ENST00000433807 A0A1B0GUL6 1792 aa16.35■□□□□ 0.21
MCF2L-215ENST00000433807 C9orf131Q5VYM1 1079 aa16.34■□□□□ 0.21
MCF2L-215ENST00000433807 SUPT20HQ8NEM7 779 aa16.34■□□□□ 0.21
MCF2L-215ENST00000433807 RTFDC1Q9BY42 306 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms