RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 COL4A5P29400 1685 aa24.08■■□□□ 1.44
RPUSD3-207ENST00000433555 LTBP3Q9NS15 1303 aa24.08■■□□□ 1.44
RPUSD3-207ENST00000433555 H7C1W4 665 aa24.07■■□□□ 1.44
RPUSD3-207ENST00000433555 RARSP54136 660 aaKnown RBP24.07■■□□□ 1.44
RPUSD3-207ENST00000433555 PTPRCP08575 1304 aa24.07■■□□□ 1.44
RPUSD3-207ENST00000433555 PDE8AO60658 829 aa24.06■■□□□ 1.44
RPUSD3-207ENST00000433555 SOGA3Q5TF21 947 aa24.06■■□□□ 1.44
RPUSD3-207ENST00000433555 SLC4A10Q6U841 1118 aa24.06■■□□□ 1.44
RPUSD3-207ENST00000433555 CELF1Q92879 486 aaKnown RBP24.06■■□□□ 1.44
RPUSD3-207ENST00000433555 TAOK3Q9H2K8 898 aa24.06■■□□□ 1.44
RPUSD3-207ENST00000433555 A0A1B0GUL6 1792 aa24.06■■□□□ 1.44
RPUSD3-207ENST00000433555 GRAPQ13588 217 aa24.05■■□□□ 1.44
RPUSD3-207ENST00000433555 DDX46Q7L014 1031 aaKnown RBP24.05■■□□□ 1.44
RPUSD3-207ENST00000433555 GRAPLQ8TC17 118 aaPredicted RBP24.05■■□□□ 1.44
RPUSD3-207ENST00000433555 CCDC85AQ96PX6 553 aaPredicted RBP24.05■■□□□ 1.44
RPUSD3-207ENST00000433555 LMNB1P20700 586 aa24.04■■□□□ 1.44
RPUSD3-207ENST00000433555 CTSWP56202 376 aa24.04■■□□□ 1.44
RPUSD3-207ENST00000433555 SEC31BQ9NQW1 1179 aa24.04■■□□□ 1.44
RPUSD3-207ENST00000433555 FKBP4Q02790 459 aaKnown RBP eCLIP24.02■■□□□ 1.44
RPUSD3-207ENST00000433555 ATP6V0A2Q9Y487 856 aa24.02■■□□□ 1.44
RPUSD3-207ENST00000433555 BRPF1P55201 1214 aaPredicted RBP24.01■■□□□ 1.43
RPUSD3-207ENST00000433555 ZNF526Q8TF50 670 aaPredicted RBP24.01■■□□□ 1.43
RPUSD3-207ENST00000433555 SRCIN1Q9C0H9 1055 aa24.01■■□□□ 1.43
RPUSD3-207ENST00000433555 NOB1Q9ULX3 412 aaKnown RBP24.01■■□□□ 1.43
RPUSD3-207ENST00000433555 ALDH1L1O75891 902 aa24■■□□□ 1.43
RPUSD3-207ENST00000433555 TTLL11Q8NHH1 800 aa24■■□□□ 1.43
RPUSD3-207ENST00000433555 PLA2G12BQ9BX93 195 aa24■■□□□ 1.43
RPUSD3-207ENST00000433555 ZNF277Q9NRM2 450 aaPredicted RBP24■■□□□ 1.43
RPUSD3-207ENST00000433555 GRM8O00222 908 aa23.99■■□□□ 1.43
RPUSD3-207ENST00000433555 BCAR3O75815 825 aa23.99■■□□□ 1.43
RPUSD3-207ENST00000433555 CCDC152Q4G0S7 254 aa23.99■■□□□ 1.43
RPUSD3-207ENST00000433555 RTKN2Q8IZC4 609 aa23.99■■□□□ 1.43
RPUSD3-207ENST00000433555 GREM2Q9H772 168 aa23.99■■□□□ 1.43
RPUSD3-207ENST00000433555 RTL9Q8NET4 1388 aa23.99■■□□□ 1.43
RPUSD3-207ENST00000433555 BBOX1O75936 387 aa23.98■■□□□ 1.43
RPUSD3-207ENST00000433555 HSP90B1P14625 803 aaKnown RBP23.98■■□□□ 1.43
RPUSD3-207ENST00000433555 CC2D2BQ6DHV5 1058 aa23.98■■□□□ 1.43
RPUSD3-207ENST00000433555 PSMD1Q99460 953 aa23.98■■□□□ 1.43
RPUSD3-207ENST00000433555 FAM161AQ3B820 660 aa23.97■■□□□ 1.43
RPUSD3-207ENST00000433555 EPHA10Q5JZY3 1008 aa23.97■■□□□ 1.43
RPUSD3-207ENST00000433555 SP8Q8IXZ3 490 aa23.97■■□□□ 1.43
RPUSD3-207ENST00000433555 KIF16BQ96L93 1317 aa23.97■■□□□ 1.43
RPUSD3-207ENST00000433555 TNNQ9UQP3 1299 aa23.97■■□□□ 1.43
RPUSD3-207ENST00000433555 FOXO4P98177 505 aa23.96■■□□□ 1.43
RPUSD3-207ENST00000433555 UTYO14607 1347 aa23.95■■□□□ 1.42
RPUSD3-207ENST00000433555 NBPF7P0C2Y1 421 aaPredicted RBP23.95■■□□□ 1.42
RPUSD3-207ENST00000433555 IARSP41252 1262 aaKnown RBP23.95■■□□□ 1.42
RPUSD3-207ENST00000433555 ZC3H4Q9UPT8 1303 aaKnown RBP23.94■■□□□ 1.42
RPUSD3-207ENST00000433555 WDR90Q96KV7 1748 aa23.94■■□□□ 1.42
RPUSD3-207ENST00000433555 RPS8P62241 208 aaKnown RBP23.94■■□□□ 1.42
RPUSD3-207ENST00000433555 KAZALD1Q96I82 304 aa23.94■■□□□ 1.42
RPUSD3-207ENST00000433555 SUCLG2Q96I99 432 aa23.94■■□□□ 1.42
RPUSD3-207ENST00000433555 CSF1RP07333 972 aa23.93■■□□□ 1.42
RPUSD3-207ENST00000433555 TMC4Q7Z404 712 aa23.93■■□□□ 1.42
RPUSD3-207ENST00000433555 C9orf78Q9NZ63 289 aaPredicted RBP23.93■■□□□ 1.42
RPUSD3-207ENST00000433555 GPSM2P81274 684 aa23.92■■□□□ 1.42
RPUSD3-207ENST00000433555 RTFDC1Q9BY42 306 aaPredicted RBP23.92■■□□□ 1.42
RPUSD3-207ENST00000433555 API5Q9BZZ5 524 aaKnown RBP23.92■■□□□ 1.42
RPUSD3-207ENST00000433555 ZNF541Q9H0D2 1346 aa23.91■■□□□ 1.42
RPUSD3-207ENST00000433555 GRIPAP1Q4V328 841 aa23.91■■□□□ 1.42
RPUSD3-207ENST00000433555 DPP8Q6V1X1 898 aaPredicted RBP23.91■■□□□ 1.42
RPUSD3-207ENST00000433555 MPNDQ8N594 471 aa23.91■■□□□ 1.42
RPUSD3-207ENST00000433555 GPBP1L1Q9HC44 474 aaPredicted RBP23.91■■□□□ 1.42
RPUSD3-207ENST00000433555 TRIM27P14373 513 aa23.9■■□□□ 1.42
RPUSD3-207ENST00000433555 ITGA6P23229 1130 aa23.9■■□□□ 1.42
RPUSD3-207ENST00000433555 ANKRD18AQ8IVF6 992 aa23.9■■□□□ 1.42
RPUSD3-207ENST00000433555 USP44Q9H0E7 712 aa23.9■■□□□ 1.42
RPUSD3-207ENST00000433555 NMRK2Q9NPI5 230 aa23.9■■□□□ 1.42
RPUSD3-207ENST00000433555 AOC3Q16853 763 aa23.89■■□□□ 1.41
RPUSD3-207ENST00000433555 GPR101Q96P66 508 aaPredicted RBP23.89■■□□□ 1.41
RPUSD3-207ENST00000433555 CDC5LQ99459 802 aaKnown RBP23.89■■□□□ 1.41
RPUSD3-207ENST00000433555 CCT4P50991 539 aaKnown RBP23.88■■□□□ 1.41
RPUSD3-207ENST00000433555 LMBR1LQ6UX01 489 aa23.88■■□□□ 1.41
RPUSD3-207ENST00000433555 ARHGAP45Q92619 1136 aa23.88■■□□□ 1.41
RPUSD3-207ENST00000433555 FRAT1Q92837 279 aaPredicted RBP23.88■■□□□ 1.41
RPUSD3-207ENST00000433555 TMX4Q9H1E5 349 aaPredicted RBP23.88■■□□□ 1.41
RPUSD3-207ENST00000433555 SCN9AQ15858 1988 aa23.87■■□□□ 1.41
RPUSD3-207ENST00000433555 ZNF646O15015 1829 aaPredicted RBP23.87■■□□□ 1.41
RPUSD3-207ENST00000433555 PPIP5K2O43314 1243 aa23.87■■□□□ 1.41
RPUSD3-207ENST00000433555 ANKRD44Q8N8A2 993 aa23.87■■□□□ 1.41
RPUSD3-207ENST00000433555 POLLQ9UGP5 575 aa23.87■■□□□ 1.41
RPUSD3-207ENST00000433555 NSFL1CQ9UNZ2 370 aaKnown RBP23.87■■□□□ 1.41
RPUSD3-207ENST00000433555 CHMP3Q9Y3E7 222 aa23.87■■□□□ 1.41
RPUSD3-207ENST00000433555 KIF3CO14782 793 aa23.86■■□□□ 1.41
RPUSD3-207ENST00000433555 ATF7IPQ6VMQ6 1270 aa23.86■■□□□ 1.41
RPUSD3-207ENST00000433555 BICC1Q9H694 974 aaKnown RBP23.86■■□□□ 1.41
RPUSD3-207ENST00000433555 PSME4Q14997 1843 aa23.86■■□□□ 1.41
RPUSD3-207ENST00000433555 GLTPD2A6NH11 291 aa23.85■■□□□ 1.41
RPUSD3-207ENST00000433555 LARGE2Q8N3Y3 721 aa23.85■■□□□ 1.41
RPUSD3-207ENST00000433555 SUPT20HQ8NEM7 779 aa23.85■■□□□ 1.41
RPUSD3-207ENST00000433555 KDM2BQ8NHM5 1336 aa23.84■■□□□ 1.41
RPUSD3-207ENST00000433555 WTIPA6NIX2 430 aaPredicted RBP23.84■■□□□ 1.41
RPUSD3-207ENST00000433555 FZD9O00144 591 aa23.84■■□□□ 1.41
RPUSD3-207ENST00000433555 KIAA2012Q0VF49 1180 aa23.84■■□□□ 1.41
RPUSD3-207ENST00000433555 RABL6Q3YEC7 729 aaPredicted RBP23.84■■□□□ 1.41
RPUSD3-207ENST00000433555 INTS3Q68E01 1043 aaKnown RBP23.84■■□□□ 1.41
RPUSD3-207ENST00000433555 TBC1D16Q8TBP0 767 aa23.84■■□□□ 1.41
RPUSD3-207ENST00000433555 CLUAP1Q96AJ1 413 aa23.84■■□□□ 1.41
RPUSD3-207ENST00000433555 ZNF594Q96JF6 807 aaPredicted RBP23.84■■□□□ 1.41
RPUSD3-207ENST00000433555 BSDC1Q9NW68 430 aaPredicted RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms