RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 NDC80O14777 642 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 SRGAP3O43295 1099 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 PDE1AP54750 535 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 IFFO2Q5TF58 517 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 BLOC1S2Q6QNY1 142 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 TRIML1Q8N9V2 468 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 ZNF512BQ96KM6 892 aaPredicted RBP4.4□□□□□ -1.7
SHPRH-205ENST00000433355 MAST3O60307 1309 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 ROBO2Q9HCK4 1378 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 NWD2Q9ULI1 1742 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 ADRA2BP18089 450 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 IMMTQ16891 758 aaKnown RBP4.4□□□□□ -1.7
SHPRH-205ENST00000433355 TMEM57Q8N5G2 664 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 KRT23Q9C075 422 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 HELLSQ9NRZ9 838 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 PAXBP1Q9Y5B6 917 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 CHD4Q14839 1912 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 PLCH1Q4KWH8 1693 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 SLC17A8Q8NDX2 589 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 MEGF6O75095 1541 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 LMNB2Q03252 620 aa4.4□□□□□ -1.71
SHPRH-205ENST00000433355 CARD14Q9BXL6 1004 aa4.4□□□□□ -1.71
SHPRH-205ENST00000433355 PEAK1Q9H792 1746 aa4.4□□□□□ -1.71
SHPRH-205ENST00000433355 ZNF189O75820 626 aaPredicted RBP4.4□□□□□ -1.71
SHPRH-205ENST00000433355 WASHC4Q2M389 1173 aa4.4□□□□□ -1.71
SHPRH-205ENST00000433355 CEP126Q9P2H0 1117 aa4.4□□□□□ -1.71
SHPRH-205ENST00000433355 PPP2R5EQ16537 467 aa4.4□□□□□ -1.71
SHPRH-205ENST00000433355 PPP1R2P3Q6NXS1 205 aa4.4□□□□□ -1.71
SHPRH-205ENST00000433355 BICD2Q8TD16 824 aa4.4□□□□□ -1.71
SHPRH-205ENST00000433355 FSD1Q9BTV5 496 aa4.4□□□□□ -1.71
SHPRH-205ENST00000433355 NAA15Q9BXJ9 866 aaKnown RBP4.4□□□□□ -1.71
SHPRH-205ENST00000433355 TSPY26PQ9H489 355 aa4.4□□□□□ -1.71
SHPRH-205ENST00000433355 NOL7Q9UMY1 257 aaKnown RBP4.4□□□□□ -1.71
SHPRH-205ENST00000433355 TRIM14Q14142 442 aa4.4□□□□□ -1.71
SHPRH-205ENST00000433355 FAM43BQ6ZT52 329 aaPredicted RBP4.4□□□□□ -1.71
SHPRH-205ENST00000433355 CAGE1Q8TC20 777 aa4.4□□□□□ -1.71
SHPRH-205ENST00000433355 SNRKQ9NRH2 765 aa4.4□□□□□ -1.71
SHPRH-205ENST00000433355 SOS2Q07890 1332 aaPredicted RBP4.39□□□□□ -1.71
SHPRH-205ENST00000433355 CALML3P27482 149 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 FAM114A1Q8IWE2 563 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 PPP2R3AQ06190 1150 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 RMND1Q9NWS8 449 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 COL14A1Q05707 1796 aaKnown RBP4.39□□□□□ -1.71
SHPRH-205ENST00000433355 ESPNB1AK53 854 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 ERVV-1B6SEH8 477 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 CWC15Q9P013 229 aaKnown RBP4.39□□□□□ -1.71
SHPRH-205ENST00000433355 LCMT1Q9UIC8 334 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 V9GYY5 206 aaPredicted RBP4.39□□□□□ -1.71
SHPRH-205ENST00000433355 MROH5Q6ZUA9 1318 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 POLR3GO15318 223 aaPredicted RBP4.39□□□□□ -1.71
SHPRH-205ENST00000433355 EIF4A2Q14240 407 aaKnown RBP4.39□□□□□ -1.71
SHPRH-205ENST00000433355 TMEM132EQ6IEE7 984 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 MYH6P13533 1939 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 CCDC66A2RUB6 948 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 BTBD11A6QL63 1104 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 LDHCP07864 332 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 USP37Q86T82 979 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 FCHSD1Q86WN1 690 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 DNAI2Q9GZS0 605 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 METP08581 1390 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 LAD1O00515 517 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 MAP3K11Q16584 847 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 STX1AQ16623 288 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 RILPL1Q5EBL4 403 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 SMARCE1Q969G3 411 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 ANKRD2Q9GZV1 360 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 TJP1Q07157 1748 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 GRM8O00222 908 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 TEX35Q5T0J7 233 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 DSCC1Q9BVC3 393 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 PLA2G12BQ9BX93 195 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 NLRP2Q9NX02 1062 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 HOOK2Q96ED9 719 aa4.39□□□□□ -1.71
SHPRH-205ENST00000433355 TRAK2O60296 914 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 CASTP20810 708 aaKnown RBP4.38□□□□□ -1.71
SHPRH-205ENST00000433355 CLEC4GQ6UXB4 293 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 CUEDC2Q9H467 287 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.38□□□□□ -1.71
SHPRH-205ENST00000433355 C1orf167Q5SNV9 1468 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 CROCCP2Q86T23 111 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 HSPA4P34932 840 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 MAP3K12Q12852 859 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 TBC1D9Q6ZT07 1266 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 ANO10Q9NW15 660 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 NEK4P51957 841 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 OLFM4Q6UX06 510 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 LRRC59Q96AG4 307 aaKnown RBP4.38□□□□□ -1.71
SHPRH-205ENST00000433355 CGNQ9P2M7 1197 aaKnown RBP4.38□□□□□ -1.71
SHPRH-205ENST00000433355 TRIM35Q9UPQ4 493 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 ANXA13P27216 316 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 MRFAP1L1Q96HT8 127 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 NYXQ9GZU5 481 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 IMPACTQ9P2X3 320 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 AFDNP55196 1824 aaKnown RBP4.38□□□□□ -1.71
SHPRH-205ENST00000433355 PPP1R12BO60237 982 aaPredicted RBP4.38□□□□□ -1.71
SHPRH-205ENST00000433355 CEP85Q6P2H3 762 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 TBC1D22AQ8WUA7 517 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 CWC25Q9NXE8 425 aaPredicted RBP4.38□□□□□ -1.71
SHPRH-205ENST00000433355 MYO1AQ9UBC5 1043 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 RP1L1Q8IWN7 2480 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms