RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 FSD1Q9BTV5 496 aa23.69■■□□□ 1.38
VRK2-205ENST00000432057 PUS3Q9BZE2 481 aaKnown RBP23.69■■□□□ 1.38
VRK2-205ENST00000432057 EIF5P55010 431 aaKnown RBP23.68■■□□□ 1.38
VRK2-205ENST00000432057 NMIQ13287 307 aaPredicted RBP23.68■■□□□ 1.38
VRK2-205ENST00000432057 CCDC57Q2TAC2 916 aa23.68■■□□□ 1.38
VRK2-205ENST00000432057 KIAA1211Q6ZU35 1233 aa23.68■■□□□ 1.38
VRK2-205ENST00000432057 FNBP4Q8N3X1 1017 aaPredicted RBP23.68■■□□□ 1.38
VRK2-205ENST00000432057 EDC3Q96F86 508 aaKnown RBP23.68■■□□□ 1.38
VRK2-205ENST00000432057 CIZ1Q9ULV3 898 aaPredicted RBP23.68■■□□□ 1.38
VRK2-205ENST00000432057 CIAO1O76071 339 aa23.68■■□□□ 1.38
VRK2-205ENST00000432057 FAM227BQ96M60 508 aa23.68■■□□□ 1.38
VRK2-205ENST00000432057 UBN2Q6ZU65 1347 aa23.67■■□□□ 1.38
VRK2-205ENST00000432057 DDX60Q8IY21 1712 aaKnown RBP23.67■■□□□ 1.38
VRK2-205ENST00000432057 HIP1O00291 1037 aa23.67■■□□□ 1.38
VRK2-205ENST00000432057 GPR108Q9NPR9 543 aa23.67■■□□□ 1.38
VRK2-205ENST00000432057 LAMB2P55268 1798 aa23.67■■□□□ 1.38
VRK2-205ENST00000432057 NHSQ6T4R5 1651 aa23.67■■□□□ 1.38
VRK2-205ENST00000432057 CSF1RP07333 972 aa23.66■■□□□ 1.38
VRK2-205ENST00000432057 NDUFB9Q9Y6M9 179 aa23.66■■□□□ 1.38
VRK2-205ENST00000432057 PTH1RQ03431 593 aa23.66■■□□□ 1.38
VRK2-205ENST00000432057 NEUROD6Q96NK8 337 aa23.66■■□□□ 1.38
VRK2-205ENST00000432057 SMARCC1Q92922 1105 aaPredicted RBP23.65■■□□□ 1.38
VRK2-205ENST00000432057 TRMT112Q9UI30 125 aaKnown RBP23.65■■□□□ 1.38
VRK2-205ENST00000432057 SPEF2Q9C093 1822 aa23.65■■□□□ 1.38
VRK2-205ENST00000432057 CASZ1Q86V15 1759 aa23.65■■□□□ 1.38
VRK2-205ENST00000432057 A0A0D9SFI3 127 aa23.64■■□□□ 1.38
VRK2-205ENST00000432057 DEKP35659 375 aaKnown RBP23.64■■□□□ 1.38
VRK2-205ENST00000432057 ZNF34Q8IZ26 560 aa23.64■■□□□ 1.38
VRK2-205ENST00000432057 DNAJC2Q99543 621 aaKnown RBP23.64■■□□□ 1.38
VRK2-205ENST00000432057 USP21Q9UK80 565 aa23.64■■□□□ 1.38
VRK2-205ENST00000432057 SNX14Q9Y5W7 946 aa23.64■■□□□ 1.38
VRK2-205ENST00000432057 TIMM10P62072 90 aa23.64■■□□□ 1.37
VRK2-205ENST00000432057 UPF3BQ9BZI7 483 aaKnown RBP23.64■■□□□ 1.37
VRK2-205ENST00000432057 CCDC171Q6TFL3 1326 aa23.63■■□□□ 1.37
VRK2-205ENST00000432057 RIC1Q4ADV7 1423 aa23.63■■□□□ 1.37
VRK2-205ENST00000432057 IRS4O14654 1257 aaPredicted RBP23.63■■□□□ 1.37
VRK2-205ENST00000432057 IFIT5Q13325 482 aaKnown RBP23.63■■□□□ 1.37
VRK2-205ENST00000432057 TAF7LQ5H9L4 462 aa23.63■■□□□ 1.37
VRK2-205ENST00000432057 HAUS7Q99871 368 aa23.63■■□□□ 1.37
VRK2-205ENST00000432057 MED23Q9ULK4 1368 aa23.63■■□□□ 1.37
VRK2-205ENST00000432057 CTSWP56202 376 aa23.62■■□□□ 1.37
VRK2-205ENST00000432057 SBF2Q86WG5 1849 aa23.62■■□□□ 1.37
VRK2-205ENST00000432057 LRP5O75197 1615 aa23.62■■□□□ 1.37
VRK2-205ENST00000432057 A0A1B0GUL7 405 aa23.62■■□□□ 1.37
VRK2-205ENST00000432057 RAB3GAP1Q15042 981 aa23.62■■□□□ 1.37
VRK2-205ENST00000432057 RASEFQ8IZ41 740 aa23.62■■□□□ 1.37
VRK2-205ENST00000432057 TTLL11Q8NHH1 800 aa23.62■■□□□ 1.37
VRK2-205ENST00000432057 GREM2Q9H772 168 aa23.62■■□□□ 1.37
VRK2-205ENST00000432057 SNRKQ9NRH2 765 aa23.62■■□□□ 1.37
VRK2-205ENST00000432057 RFX7Q2KHR2 1363 aa23.61■■□□□ 1.37
VRK2-205ENST00000432057 CEP126Q9P2H0 1117 aa23.61■■□□□ 1.37
VRK2-205ENST00000432057 FBXO3Q9UK99 471 aa23.61■■□□□ 1.37
VRK2-205ENST00000432057 CAMTA2O94983 1202 aa23.6■■□□□ 1.37
VRK2-205ENST00000432057 SCN7AQ01118 1682 aa23.6■■□□□ 1.37
VRK2-205ENST00000432057 ITGA6P23229 1130 aa23.6■■□□□ 1.37
VRK2-205ENST00000432057 MCM4P33991 863 aa23.6■■□□□ 1.37
VRK2-205ENST00000432057 MCM2P49736 904 aa23.6■■□□□ 1.37
VRK2-205ENST00000432057 NOL8Q76FK4 1167 aaKnown RBP23.6■■□□□ 1.37
VRK2-205ENST00000432057 DDX46Q7L014 1031 aaKnown RBP23.6■■□□□ 1.37
VRK2-205ENST00000432057 TNPO1Q92973 898 aaKnown RBP23.6■■□□□ 1.37
VRK2-205ENST00000432057 MYH7P12883 1935 aa23.6■■□□□ 1.37
VRK2-205ENST00000432057 PTF1AQ7RTS3 328 aa23.59■■□□□ 1.37
VRK2-205ENST00000432057 TMX3Q96JJ7 454 aa23.59■■□□□ 1.37
VRK2-205ENST00000432057 PDE8AO60658 829 aa23.58■■□□□ 1.37
VRK2-205ENST00000432057 PRPF40BQ6NWY9 871 aaKnown RBP23.58■■□□□ 1.37
VRK2-205ENST00000432057 ZGPATQ8N5A5 531 aaKnown RBP23.58■■□□□ 1.37
VRK2-205ENST00000432057 LINC00116Q8NCU8 138 aa23.58■■□□□ 1.37
VRK2-205ENST00000432057 ARAP2Q8WZ64 1704 aa23.58■■□□□ 1.36
VRK2-205ENST00000432057 MEX3CQ5U5Q3 659 aaKnown RBP23.58■■□□□ 1.36
VRK2-205ENST00000432057 SUSD4Q5VX71 490 aa23.58■■□□□ 1.36
VRK2-205ENST00000432057 ZNF589Q86UQ0 364 aaPredicted RBP23.58■■□□□ 1.36
VRK2-205ENST00000432057 RBM8AQ9Y5S9 174 aaKnown RBP23.58■■□□□ 1.36
VRK2-205ENST00000432057 TAF1LQ8IZX4 1826 aa23.57■■□□□ 1.36
VRK2-205ENST00000432057 ANKRD18BA2A2Z9 1011 aa23.57■■□□□ 1.36
VRK2-205ENST00000432057 LY75O60449 1722 aa23.56■■□□□ 1.36
VRK2-205ENST00000432057 FAM177BA6PVY3 158 aa23.56■■□□□ 1.36
VRK2-205ENST00000432057 CHGBP05060 677 aa23.56■■□□□ 1.36
VRK2-205ENST00000432057 SSFA2P28290 1259 aa23.56■■□□□ 1.36
VRK2-205ENST00000432057 AKAP11Q9UKA4 1901 aa23.56■■□□□ 1.36
VRK2-205ENST00000432057 GOLIM4O00461 696 aa23.56■■□□□ 1.36
VRK2-205ENST00000432057 ADORA1P30542 326 aa23.56■■□□□ 1.36
VRK2-205ENST00000432057 KCNQ4P56696 695 aa23.56■■□□□ 1.36
VRK2-205ENST00000432057 KBTBD3Q8NAB2 608 aa23.56■■□□□ 1.36
VRK2-205ENST00000432057 MAP4K1Q92918 833 aa23.56■■□□□ 1.36
VRK2-205ENST00000432057 KCNB2Q92953 911 aa23.56■■□□□ 1.36
VRK2-205ENST00000432057 PAG1Q9NWQ8 432 aa23.56■■□□□ 1.36
VRK2-205ENST00000432057 AKAP2Q9Y2D5 859 aa23.56■■□□□ 1.36
VRK2-205ENST00000432057 NECTIN1Q15223 517 aa23.55■■□□□ 1.36
VRK2-205ENST00000432057 SH3TC1Q8TE82 1336 aa23.54■■□□□ 1.36
VRK2-205ENST00000432057 IFIT1P09914 478 aaKnown RBP23.54■■□□□ 1.36
VRK2-205ENST00000432057 KCNJ4P48050 445 aa23.54■■□□□ 1.36
VRK2-205ENST00000432057 LDHAL6AQ6ZMR3 332 aa23.54■■□□□ 1.36
VRK2-205ENST00000432057 RIPOR2Q9Y4F9 1068 aa23.54■■□□□ 1.36
VRK2-205ENST00000432057 HCLS1P14317 486 aaPredicted RBP23.53■■□□□ 1.36
VRK2-205ENST00000432057 METTL24Q5JXM2 366 aa23.53■■□□□ 1.36
VRK2-205ENST00000432057 FAM182BQ5T319 152 aa23.53■■□□□ 1.36
VRK2-205ENST00000432057 CREB3L3Q68CJ9 461 aa23.53■■□□□ 1.36
VRK2-205ENST00000432057 XAGE2Q96GT9 111 aa23.53■■□□□ 1.36
VRK2-205ENST00000432057 TTC14Q96N46 770 aa23.53■■□□□ 1.36
VRK2-205ENST00000432057 UTP14AQ9BVJ6 771 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms