RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 C7orf43Q8WVR3 580 aa23.5■■□□□ 1.35
DDR1-236ENST00000431373 CCDC88AQ3V6T2 1871 aa23.49■■□□□ 1.35
DDR1-236ENST00000431373 CCT4P50991 539 aaKnown RBP23.49■■□□□ 1.35
DDR1-236ENST00000431373 CCDC152Q4G0S7 254 aa23.49■■□□□ 1.35
DDR1-236ENST00000431373 ATF7IPQ6VMQ6 1270 aa23.49■■□□□ 1.35
DDR1-236ENST00000431373 PLA2G12BQ9BX93 195 aa23.49■■□□□ 1.35
DDR1-236ENST00000431373 PPEF1O14829 653 aaPredicted RBP23.48■■□□□ 1.35
DDR1-236ENST00000431373 GRAPQ13588 217 aa23.48■■□□□ 1.35
DDR1-236ENST00000431373 GRAPLQ8TC17 118 aaPredicted RBP23.48■■□□□ 1.35
DDR1-236ENST00000431373 TRIM27P14373 513 aa23.47■■□□□ 1.35
DDR1-236ENST00000431373 CCDC93Q567U6 631 aa23.47■■□□□ 1.35
DDR1-236ENST00000431373 ZKSCAN2Q63HK3 967 aa23.47■■□□□ 1.35
DDR1-236ENST00000431373 UTYO14607 1347 aa23.46■■□□□ 1.35
DDR1-236ENST00000431373 BBOX1O75936 387 aa23.46■■□□□ 1.35
DDR1-236ENST00000431373 TTLL11Q8NHH1 800 aa23.46■■□□□ 1.35
DDR1-236ENST00000431373 RCAN3Q9UKA8 241 aa23.46■■□□□ 1.35
DDR1-236ENST00000431373 SPEF2Q9C093 1822 aa23.45■■□□□ 1.34
DDR1-236ENST00000431373 LRRC37AA6NMS7 1700 aa23.45■■□□□ 1.34
DDR1-236ENST00000431373 UTRNP46939 3433 aa23.45■■□□□ 1.34
DDR1-236ENST00000431373 COL4A1P02462 1669 aa23.45■■□□□ 1.34
DDR1-236ENST00000431373 CC2D2BQ6DHV5 1058 aa23.45■■□□□ 1.34
DDR1-236ENST00000431373 CCDC85AQ96PX6 553 aaPredicted RBP23.45■■□□□ 1.34
DDR1-236ENST00000431373 RTL9Q8NET4 1388 aa23.44■■□□□ 1.34
DDR1-236ENST00000431373 NFKBIEO00221 500 aa23.44■■□□□ 1.34
DDR1-236ENST00000431373 RASSF7Q02833 373 aa23.44■■□□□ 1.34
DDR1-236ENST00000431373 OLFM4Q6UX06 510 aa23.44■■□□□ 1.34
DDR1-236ENST00000431373 TMC4Q7Z404 712 aa23.44■■□□□ 1.34
DDR1-236ENST00000431373 SEC31BQ9NQW1 1179 aa23.44■■□□□ 1.34
DDR1-236ENST00000431373 TNNQ9UQP3 1299 aa23.44■■□□□ 1.34
DDR1-236ENST00000431373 NBPF7P0C2Y1 421 aaPredicted RBP23.43■■□□□ 1.34
DDR1-236ENST00000431373 INTS3Q68E01 1043 aaKnown RBP23.43■■□□□ 1.34
DDR1-236ENST00000431373 RTKN2Q8IZC4 609 aa23.43■■□□□ 1.34
DDR1-236ENST00000431373 CELF1Q92879 486 aaKnown RBP23.43■■□□□ 1.34
DDR1-236ENST00000431373 USP44Q9H0E7 712 aa23.43■■□□□ 1.34
DDR1-236ENST00000431373 TMX4Q9H1E5 349 aaPredicted RBP23.43■■□□□ 1.34
DDR1-236ENST00000431373 ATP6V0A2Q9Y487 856 aa23.43■■□□□ 1.34
DDR1-236ENST00000431373 DICER1Q9UPY3 1922 aaKnown RBP23.43■■□□□ 1.34
DDR1-236ENST00000431373 LTBP3Q9NS15 1303 aa23.42■■□□□ 1.34
DDR1-236ENST00000431373 CSF1RP07333 972 aa23.42■■□□□ 1.34
DDR1-236ENST00000431373 FOXO4P98177 505 aa23.42■■□□□ 1.34
DDR1-236ENST00000431373 CLUAP1Q96AJ1 413 aa23.42■■□□□ 1.34
DDR1-236ENST00000431373 SUCLG2Q96I99 432 aa23.42■■□□□ 1.34
DDR1-236ENST00000431373 GREM2Q9H772 168 aa23.42■■□□□ 1.34
DDR1-236ENST00000431373 SNED1Q8TER0 1413 aa23.42■■□□□ 1.34
DDR1-236ENST00000431373 RPS8P62241 208 aaKnown RBP23.41■■□□□ 1.34
DDR1-236ENST00000431373 GRIPAP1Q4V328 841 aa23.41■■□□□ 1.34
DDR1-236ENST00000431373 SP8Q8IXZ3 490 aa23.41■■□□□ 1.34
DDR1-236ENST00000431373 TAOK3Q9H2K8 898 aa23.41■■□□□ 1.34
DDR1-236ENST00000431373 FKBP4Q02790 459 aaKnown RBP eCLIP23.4■■□□□ 1.34
DDR1-236ENST00000431373 EPHA10Q5JZY3 1008 aa23.4■■□□□ 1.34
DDR1-236ENST00000431373 CDC5LQ99459 802 aaKnown RBP23.4■■□□□ 1.34
DDR1-236ENST00000431373 YY1P25490 414 aa23.39■■□□□ 1.33
DDR1-236ENST00000431373 FAM161AQ3B820 660 aa23.39■■□□□ 1.33
DDR1-236ENST00000431373 LMBR1LQ6UX01 489 aa23.39■■□□□ 1.33
DDR1-236ENST00000431373 SLC51AQ86UW1 340 aa23.39■■□□□ 1.33
DDR1-236ENST00000431373 ANKRD18AQ8IVF6 992 aa23.39■■□□□ 1.33
DDR1-236ENST00000431373 FTSJ3Q8IY81 847 aaKnown RBP23.39■■□□□ 1.33
DDR1-236ENST00000431373 LMNB1P20700 586 aa23.38■■□□□ 1.33
DDR1-236ENST00000431373 ITGA6P23229 1130 aa23.38■■□□□ 1.33
DDR1-236ENST00000431373 C9orf131Q5VYM1 1079 aa23.38■■□□□ 1.33
DDR1-236ENST00000431373 DZIP1LQ8IYY4 767 aaKnown RBP23.38■■□□□ 1.33
DDR1-236ENST00000431373 KAZALD1Q96I82 304 aa23.38■■□□□ 1.33
DDR1-236ENST00000431373 RNF181Q9P0P0 153 aa23.38■■□□□ 1.33
DDR1-236ENST00000431373 CHMP3Q9Y3E7 222 aa23.38■■□□□ 1.33
DDR1-236ENST00000431373 TIAM2Q8IVF5 1701 aa23.38■■□□□ 1.33
DDR1-236ENST00000431373 UBTFL1P0CB47 393 aaPredicted RBP23.37■■□□□ 1.33
DDR1-236ENST00000431373 PRELPP51888 382 aa23.37■■□□□ 1.33
DDR1-236ENST00000431373 TMEM57Q8N5G2 664 aa23.37■■□□□ 1.33
DDR1-236ENST00000431373 PSMD1Q99460 953 aa23.37■■□□□ 1.33
DDR1-236ENST00000431373 ANKRD18BA2A2Z9 1011 aa23.36■■□□□ 1.33
DDR1-236ENST00000431373 BICC1Q9H694 974 aaKnown RBP23.36■■□□□ 1.33
DDR1-236ENST00000431373 IFIT5Q13325 482 aaKnown RBP23.35■■□□□ 1.33
DDR1-236ENST00000431373 MEIS3Q99687 375 aa23.35■■□□□ 1.33
DDR1-236ENST00000431373 HDAC5Q9UQL6 1122 aa23.35■■□□□ 1.33
DDR1-236ENST00000431373 LTBP1Q14766 1721 aa23.35■■□□□ 1.33
DDR1-236ENST00000431373 GNAI3P08754 354 aa23.34■■□□□ 1.33
DDR1-236ENST00000431373 MS4A1P11836 297 aa23.34■■□□□ 1.33
DDR1-236ENST00000431373 RLBP1P12271 317 aa23.34■■□□□ 1.33
DDR1-236ENST00000431373 IGHMBP2P38935 993 aaKnown RBP23.34■■□□□ 1.33
DDR1-236ENST00000431373 RABL6Q3YEC7 729 aaPredicted RBP23.34■■□□□ 1.33
DDR1-236ENST00000431373 DPP8Q6V1X1 898 aaPredicted RBP23.34■■□□□ 1.33
DDR1-236ENST00000431373 MPNDQ8N594 471 aa23.34■■□□□ 1.33
DDR1-236ENST00000431373 CCDC57Q2TAC2 916 aa23.33■■□□□ 1.33
DDR1-236ENST00000431373 ANKRD44Q8N8A2 993 aa23.33■■□□□ 1.33
DDR1-236ENST00000431373 ZNF277Q9NRM2 450 aaPredicted RBP23.33■■□□□ 1.33
DDR1-236ENST00000431373 BSDC1Q9NW68 430 aaPredicted RBP23.33■■□□□ 1.33
DDR1-236ENST00000431373 DUOX1Q9NRD9 1551 aa23.32■■□□□ 1.32
DDR1-236ENST00000431373 SUPT20HQ8NEM7 779 aa23.32■■□□□ 1.32
DDR1-236ENST00000431373 PLIN1O60240 522 aa23.31■■□□□ 1.32
DDR1-236ENST00000431373 IARSP41252 1262 aaKnown RBP23.31■■□□□ 1.32
DDR1-236ENST00000431373 ITPRIPQ8IWB1 547 aa23.31■■□□□ 1.32
DDR1-236ENST00000431373 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.31■■□□□ 1.32
DDR1-236ENST00000431373 MPHOSPH8Q99549 860 aa23.31■■□□□ 1.32
DDR1-236ENST00000431373 RTFDC1Q9BY42 306 aaPredicted RBP23.31■■□□□ 1.32
DDR1-236ENST00000431373 NSFL1CQ9UNZ2 370 aaKnown RBP23.31■■□□□ 1.32
DDR1-236ENST00000431373 A0A1B0GUL6 1792 aa23.31■■□□□ 1.32
DDR1-236ENST00000431373 GPSM2P81274 684 aa23.3■■□□□ 1.32
DDR1-236ENST00000431373 TAF7LQ5H9L4 462 aa23.3■■□□□ 1.32
DDR1-236ENST00000431373 PANK1Q8TE04 598 aa23.3■■□□□ 1.32
DDR1-236ENST00000431373 LRRFIP2Q9Y608 721 aaKnown RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms