RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ZNF34Q8IZ26 560 aa20.22■□□□□ 0.83
USHBP1-203ENST00000431146 AFF2P51816 1311 aa20.22■□□□□ 0.83
USHBP1-203ENST00000431146 RREB1Q92766 1687 aa20.22■□□□□ 0.83
USHBP1-203ENST00000431146 COL5A3P25940 1745 aaPredicted RBP20.22■□□□□ 0.83
USHBP1-203ENST00000431146 CSF1RP07333 972 aa20.21■□□□□ 0.83
USHBP1-203ENST00000431146 HSP90AA1P07900 732 aaKnown RBP20.21■□□□□ 0.83
USHBP1-203ENST00000431146 LINC00116Q8NCU8 138 aa20.21■□□□□ 0.83
USHBP1-203ENST00000431146 FAM227BQ96M60 508 aa20.21■□□□□ 0.83
USHBP1-203ENST00000431146 FSD1Q9BTV5 496 aa20.21■□□□□ 0.83
USHBP1-203ENST00000431146 GREM2Q9H772 168 aa20.21■□□□□ 0.83
USHBP1-203ENST00000431146 CDHR2Q9BYE9 1310 aa20.21■□□□□ 0.83
USHBP1-203ENST00000431146 THSD7AQ9UPZ6 1657 aa20.21■□□□□ 0.83
USHBP1-203ENST00000431146 ATP5JP18859 108 aa20.21■□□□□ 0.83
USHBP1-203ENST00000431146 IFIT5Q13325 482 aaKnown RBP20.21■□□□□ 0.83
USHBP1-203ENST00000431146 TAF7LQ5H9L4 462 aa20.21■□□□□ 0.83
USHBP1-203ENST00000431146 SMIM5Q71RC9 77 aa20.21■□□□□ 0.83
USHBP1-203ENST00000431146 DNAJC2Q99543 621 aaKnown RBP20.21■□□□□ 0.83
USHBP1-203ENST00000431146 LSG1Q9H089 658 aaKnown RBP20.21■□□□□ 0.83
USHBP1-203ENST00000431146 CAMTA2O94983 1202 aa20.2■□□□□ 0.82
USHBP1-203ENST00000431146 TTLL11Q8NHH1 800 aa20.2■□□□□ 0.82
USHBP1-203ENST00000431146 CICQ96RK0 1608 aaPredicted RBP20.2■□□□□ 0.82
USHBP1-203ENST00000431146 CTSWP56202 376 aa20.2■□□□□ 0.82
USHBP1-203ENST00000431146 NMIQ13287 307 aaPredicted RBP20.2■□□□□ 0.82
USHBP1-203ENST00000431146 RAD50Q92878 1312 aa20.2■□□□□ 0.82
USHBP1-203ENST00000431146 GJD4Q96KN9 370 aaPredicted RBP20.2■□□□□ 0.82
USHBP1-203ENST00000431146 BTAF1O14981 1849 aa20.19■□□□□ 0.82
USHBP1-203ENST00000431146 CIAO1O76071 339 aa20.19■□□□□ 0.82
USHBP1-203ENST00000431146 ITGA6P23229 1130 aa20.19■□□□□ 0.82
USHBP1-203ENST00000431146 SUSD4Q5VX71 490 aa20.19■□□□□ 0.82
USHBP1-203ENST00000431146 KIAA1211Q6ZU35 1233 aa20.19■□□□□ 0.82
USHBP1-203ENST00000431146 ST18O60284 1047 aa20.18■□□□□ 0.82
USHBP1-203ENST00000431146 NEK4P51957 841 aa20.18■□□□□ 0.82
USHBP1-203ENST00000431146 PTH1RQ03431 593 aa20.18■□□□□ 0.82
USHBP1-203ENST00000431146 RUFY2Q8WXA3 655 aa20.18■□□□□ 0.82
USHBP1-203ENST00000431146 ZNF609O15014 1411 aa20.18■□□□□ 0.82
USHBP1-203ENST00000431146 A0A1B0GUL7 405 aa20.18■□□□□ 0.82
USHBP1-203ENST00000431146 HSPA4P34932 840 aa20.18■□□□□ 0.82
USHBP1-203ENST00000431146 A0A0D9SFI3 127 aa20.17■□□□□ 0.82
USHBP1-203ENST00000431146 CHGBP05060 677 aa20.17■□□□□ 0.82
USHBP1-203ENST00000431146 HCLS1P14317 486 aaPredicted RBP20.17■□□□□ 0.82
USHBP1-203ENST00000431146 CHMP5Q9NZZ3 219 aa20.17■□□□□ 0.82
USHBP1-203ENST00000431146 CEP126Q9P2H0 1117 aa20.17■□□□□ 0.82
USHBP1-203ENST00000431146 UPF3BQ9BZI7 483 aaKnown RBP20.17■□□□□ 0.82
USHBP1-203ENST00000431146 PDE8AO60658 829 aa20.16■□□□□ 0.82
USHBP1-203ENST00000431146 DDIT3P35638 169 aa20.16■□□□□ 0.82
USHBP1-203ENST00000431146 DDX46Q7L014 1031 aaKnown RBP20.16■□□□□ 0.82
USHBP1-203ENST00000431146 GPR108Q9NPR9 543 aa20.16■□□□□ 0.82
USHBP1-203ENST00000431146 NIP7Q9Y221 180 aaKnown RBP eCLIP20.16■□□□□ 0.82
USHBP1-203ENST00000431146 ANAPC15P60006 121 aa20.15■□□□□ 0.82
USHBP1-203ENST00000431146 HAUS7Q99871 368 aa20.15■□□□□ 0.82
USHBP1-203ENST00000431146 LDHAL6AQ6ZMR3 332 aa20.15■□□□□ 0.82
USHBP1-203ENST00000431146 RASEFQ8IZ41 740 aa20.15■□□□□ 0.82
USHBP1-203ENST00000431146 ANKRD18BA2A2Z9 1011 aa20.14■□□□□ 0.81
USHBP1-203ENST00000431146 HIP1O00291 1037 aa20.14■□□□□ 0.81
USHBP1-203ENST00000431146 ADORA1P30542 326 aa20.14■□□□□ 0.81
USHBP1-203ENST00000431146 NOL8Q76FK4 1167 aaKnown RBP20.14■□□□□ 0.81
USHBP1-203ENST00000431146 NHSQ6T4R5 1651 aa20.14■□□□□ 0.81
USHBP1-203ENST00000431146 UTP14AQ9BVJ6 771 aaKnown RBP20.14■□□□□ 0.81
USHBP1-203ENST00000431146 SNX14Q9Y5W7 946 aa20.14■□□□□ 0.81
USHBP1-203ENST00000431146 SH3TC1Q8TE82 1336 aa20.13■□□□□ 0.81
USHBP1-203ENST00000431146 ZNF831Q5JPB2 1677 aa20.13■□□□□ 0.81
USHBP1-203ENST00000431146 EPB41L2O43491 1005 aaKnown RBP20.13■□□□□ 0.81
USHBP1-203ENST00000431146 RIC1Q4ADV7 1423 aa20.13■□□□□ 0.81
USHBP1-203ENST00000431146 GOLIM4O00461 696 aa20.12■□□□□ 0.81
USHBP1-203ENST00000431146 METTL24Q5JXM2 366 aa20.12■□□□□ 0.81
USHBP1-203ENST00000431146 ZNF589Q86UQ0 364 aaPredicted RBP20.12■□□□□ 0.81
USHBP1-203ENST00000431146 CNNM1Q9NRU3 951 aa20.12■□□□□ 0.81
USHBP1-203ENST00000431146 RIPOR2Q9Y4F9 1068 aa20.12■□□□□ 0.81
USHBP1-203ENST00000431146 CCDC171Q6TFL3 1326 aa20.12■□□□□ 0.81
USHBP1-203ENST00000431146 BCORQ6W2J9 1755 aa20.12■□□□□ 0.81
USHBP1-203ENST00000431146 SEPT12Q8IYM1 358 aa20.12■□□□□ 0.81
USHBP1-203ENST00000431146 FBXO3Q9UK99 471 aa20.12■□□□□ 0.81
USHBP1-203ENST00000431146 SBF2Q86WG5 1849 aa20.11■□□□□ 0.81
USHBP1-203ENST00000431146 SLFNL1Q499Z3 407 aa20.11■□□□□ 0.81
USHBP1-203ENST00000431146 PRPF40BQ6NWY9 871 aaKnown RBP20.11■□□□□ 0.81
USHBP1-203ENST00000431146 XAGE2Q96GT9 111 aa20.11■□□□□ 0.81
USHBP1-203ENST00000431146 DDX60Q8IY21 1712 aaKnown RBP20.11■□□□□ 0.81
USHBP1-203ENST00000431146 IFIT1P09914 478 aaKnown RBP20.11■□□□□ 0.81
USHBP1-203ENST00000431146 PAG1Q9NWQ8 432 aa20.11■□□□□ 0.81
USHBP1-203ENST00000431146 TRPC5Q9UL62 973 aaPredicted RBP20.11■□□□□ 0.81
USHBP1-203ENST00000431146 ATRNO75882 1429 aa20.1■□□□□ 0.81
USHBP1-203ENST00000431146 NTSR2O95665 410 aa20.1■□□□□ 0.81
USHBP1-203ENST00000431146 PARP10Q53GL7 1025 aa20.1■□□□□ 0.81
USHBP1-203ENST00000431146 GORABQ5T7V8 394 aa20.1■□□□□ 0.81
USHBP1-203ENST00000431146 IL17RAQ96F46 866 aa20.1■□□□□ 0.81
USHBP1-203ENST00000431146 SEC62Q99442 399 aaKnown RBP20.1■□□□□ 0.81
USHBP1-203ENST00000431146 CCNL1Q9UK58 526 aaPredicted RBP20.1■□□□□ 0.81
USHBP1-203ENST00000431146 AKAP2Q9Y2D5 859 aa20.1■□□□□ 0.81
USHBP1-203ENST00000431146 BICDL1Q6ZP65 573 aa20.09■□□□□ 0.81
USHBP1-203ENST00000431146 SEC31BQ9NQW1 1179 aa20.09■□□□□ 0.81
USHBP1-203ENST00000431146 SNRKQ9NRH2 765 aa20.09■□□□□ 0.81
USHBP1-203ENST00000431146 RBM8AQ9Y5S9 174 aaKnown RBP20.09■□□□□ 0.81
USHBP1-203ENST00000431146 CNTNAP4Q9C0A0 1308 aa20.09■□□□□ 0.81
USHBP1-203ENST00000431146 MED23Q9ULK4 1368 aa20.09■□□□□ 0.81
USHBP1-203ENST00000431146 CPA1P15085 419 aa20.09■□□□□ 0.81
USHBP1-203ENST00000431146 CCDC129Q6ZRS4 1044 aa20.09■□□□□ 0.81
USHBP1-203ENST00000431146 ZGPATQ8N5A5 531 aaKnown RBP20.09■□□□□ 0.81
USHBP1-203ENST00000431146 ZNF652Q9Y2D9 606 aa20.09■□□□□ 0.81
USHBP1-203ENST00000431146 KCNJ4P48050 445 aa20.08■□□□□ 0.81
USHBP1-203ENST00000431146 TTC39AQ5SRH9 613 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms