RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 LDHDQ86WU2 507 aa13.14□□□□□ -0.31
HMGN1P38-201ENST00000431116 ISCA1Q9BUE6 129 aa13.14□□□□□ -0.31
HMGN1P38-201ENST00000431116 DUOX1Q9NRD9 1551 aa13.13□□□□□ -0.31
HMGN1P38-201ENST00000431116 EPHX2P34913 555 aa13.13□□□□□ -0.31
HMGN1P38-201ENST00000431116 GRAPQ13588 217 aa13.13□□□□□ -0.31
HMGN1P38-201ENST00000431116 NIM1KQ8IY84 436 aa13.13□□□□□ -0.31
HMGN1P38-201ENST00000431116 GRAPLQ8TC17 118 aaPredicted RBP13.13□□□□□ -0.31
HMGN1P38-201ENST00000431116 FAM89AQ96GI7 184 aa13.13□□□□□ -0.31
HMGN1P38-201ENST00000431116 GJA3Q9Y6H8 435 aa13.13□□□□□ -0.31
HMGN1P38-201ENST00000431116 COL4A1P02462 1669 aa13.12□□□□□ -0.31
HMGN1P38-201ENST00000431116 BBOX1O75936 387 aa13.12□□□□□ -0.31
HMGN1P38-201ENST00000431116 AOC3Q16853 763 aa13.12□□□□□ -0.31
HMGN1P38-201ENST00000431116 RTL5Q5HYW3 569 aaPredicted RBP13.12□□□□□ -0.31
HMGN1P38-201ENST00000431116 DPP8Q6V1X1 898 aaPredicted RBP13.12□□□□□ -0.31
HMGN1P38-201ENST00000431116 RIC3Q7Z5B4 369 aa13.12□□□□□ -0.31
HMGN1P38-201ENST00000431116 SP8Q8IXZ3 490 aa13.12□□□□□ -0.31
HMGN1P38-201ENST00000431116 JMYQ8N9B5 988 aa13.12□□□□□ -0.31
HMGN1P38-201ENST00000431116 C8orf58Q8NAV2 365 aa13.12□□□□□ -0.31
HMGN1P38-201ENST00000431116 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
HMGN1P38-201ENST00000431116 MRS2Q9HD23 443 aa13.12□□□□□ -0.31
HMGN1P38-201ENST00000431116 LMOD1P29536 600 aaPredicted RBP13.11□□□□□ -0.31
HMGN1P38-201ENST00000431116 PNMA8AQ86V59 439 aaPredicted RBP13.11□□□□□ -0.31
HMGN1P38-201ENST00000431116 MPNDQ8N594 471 aa13.11□□□□□ -0.31
HMGN1P38-201ENST00000431116 SUPT20HQ8NEM7 779 aa13.11□□□□□ -0.31
HMGN1P38-201ENST00000431116 TSR2Q969E8 191 aaKnown RBP13.11□□□□□ -0.31
HMGN1P38-201ENST00000431116 CLEC11AQ9Y240 323 aa13.11□□□□□ -0.31
HMGN1P38-201ENST00000431116 ZNF316A6NFI3 1004 aaPredicted RBP13.1□□□□□ -0.31
HMGN1P38-201ENST00000431116 ANP32CO43423 234 aa13.1□□□□□ -0.31
HMGN1P38-201ENST00000431116 CCDC30Q5VVM6 783 aa13.1□□□□□ -0.31
HMGN1P38-201ENST00000431116 TMC4Q7Z404 712 aa13.1□□□□□ -0.31
HMGN1P38-201ENST00000431116 MYD88Q99836 296 aa13.1□□□□□ -0.31
HMGN1P38-201ENST00000431116 RTFDC1Q9BY42 306 aaPredicted RBP13.1□□□□□ -0.31
HMGN1P38-201ENST00000431116 CREBZFQ9NS37 354 aa13.1□□□□□ -0.31
HMGN1P38-201ENST00000431116 PASKQ96RG2 1323 aa13.1□□□□□ -0.31
HMGN1P38-201ENST00000431116 MYH3P11055 1940 aa13.09□□□□□ -0.31
HMGN1P38-201ENST00000431116 IRS4O14654 1257 aaPredicted RBP13.09□□□□□ -0.31
HMGN1P38-201ENST00000431116 SCNN1DP51172 638 aa13.09□□□□□ -0.31
HMGN1P38-201ENST00000431116 TRIM28Q13263 835 aaKnown RBP13.09□□□□□ -0.31
HMGN1P38-201ENST00000431116 SF3B3Q15393 1217 aaKnown RBP13.09□□□□□ -0.31
HMGN1P38-201ENST00000431116 CCDC27Q2M243 656 aa13.09□□□□□ -0.31
HMGN1P38-201ENST00000431116 WWC1Q8IX03 1113 aa13.09□□□□□ -0.31
HMGN1P38-201ENST00000431116 TSPYL6Q8N831 410 aa13.09□□□□□ -0.31
HMGN1P38-201ENST00000431116 CELF1Q92879 486 aaKnown RBP13.09□□□□□ -0.31
HMGN1P38-201ENST00000431116 CHMP4AQ9BY43 222 aa13.09□□□□□ -0.31
HMGN1P38-201ENST00000431116 VPS33BQ9H267 617 aa13.09□□□□□ -0.31
HMGN1P38-201ENST00000431116 DDX58O95786 925 aaKnown RBP13.08□□□□□ -0.32
HMGN1P38-201ENST00000431116 KIAA2012Q0VF49 1180 aa13.08□□□□□ -0.32
HMGN1P38-201ENST00000431116 MAP1SQ66K74 1059 aaPredicted RBP13.08□□□□□ -0.32
HMGN1P38-201ENST00000431116 ZNRF3Q9ULT6 936 aa13.08□□□□□ -0.32
HMGN1P38-201ENST00000431116 CACNA1FO60840 1977 aa13.08□□□□□ -0.32
HMGN1P38-201ENST00000431116 SPEF2Q9C093 1822 aa13.08□□□□□ -0.32
HMGN1P38-201ENST00000431116 ITGBL1O95965 494 aaPredicted RBP13.07□□□□□ -0.32
HMGN1P38-201ENST00000431116 EPS15P42566 896 aa13.07□□□□□ -0.32
HMGN1P38-201ENST00000431116 ZBTB38Q8NAP3 1195 aaPredicted RBP13.07□□□□□ -0.32
HMGN1P38-201ENST00000431116 METTL22Q9BUU2 404 aaPredicted RBP13.07□□□□□ -0.32
HMGN1P38-201ENST00000431116 STK31Q9BXU1 1019 aa13.07□□□□□ -0.32
HMGN1P38-201ENST00000431116 CWC25Q9NXE8 425 aaPredicted RBP13.07□□□□□ -0.32
HMGN1P38-201ENST00000431116 MKRN1Q9UHC7 482 aaKnown RBP13.07□□□□□ -0.32
HMGN1P38-201ENST00000431116 TRPM7Q96QT4 1865 aa13.06□□□□□ -0.32
HMGN1P38-201ENST00000431116 HSP90B1P14625 803 aaKnown RBP13.06□□□□□ -0.32
HMGN1P38-201ENST00000431116 CXCL9Q07325 125 aa13.06□□□□□ -0.32
HMGN1P38-201ENST00000431116 TWISTNBQ3B726 338 aaPredicted RBP13.06□□□□□ -0.32
HMGN1P38-201ENST00000431116 IFFO2Q5TF58 517 aa13.06□□□□□ -0.32
HMGN1P38-201ENST00000431116 CNTROBQ8N137 903 aa13.06□□□□□ -0.32
HMGN1P38-201ENST00000431116 CCDC191Q8NCU4 936 aa13.06□□□□□ -0.32
HMGN1P38-201ENST00000431116 NSFL1CQ9UNZ2 370 aaKnown RBP13.06□□□□□ -0.32
HMGN1P38-201ENST00000431116 MAP3K2Q9Y2U5 619 aa13.06□□□□□ -0.32
HMGN1P38-201ENST00000431116 IL16Q14005 1332 aa13.06□□□□□ -0.32
HMGN1P38-201ENST00000431116 TMEM88BA6NKF7 163 aa13.05□□□□□ -0.32
HMGN1P38-201ENST00000431116 PCCAP05165 728 aaPredicted RBP13.05□□□□□ -0.32
HMGN1P38-201ENST00000431116 CIAPIN1Q6FI81 312 aa13.05□□□□□ -0.32
HMGN1P38-201ENST00000431116 KSR2Q6VAB6 950 aa13.05□□□□□ -0.32
HMGN1P38-201ENST00000431116 JARID2Q92833 1246 aaPredicted RBP13.05□□□□□ -0.32
HMGN1P38-201ENST00000431116 GPRC5DQ9NZD1 345 aa13.05□□□□□ -0.32
HMGN1P38-201ENST00000431116 FANCIQ9NVI1 1328 aa13.05□□□□□ -0.32
HMGN1P38-201ENST00000431116 CNTNAP1P78357 1384 aa13.05□□□□□ -0.32
HMGN1P38-201ENST00000431116 PI4KAP2A4QPH2 592 aa13.04□□□□□ -0.32
HMGN1P38-201ENST00000431116 ABCB7O75027 752 aa13.04□□□□□ -0.32
HMGN1P38-201ENST00000431116 RAD17O75943 681 aa13.04□□□□□ -0.32
HMGN1P38-201ENST00000431116 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
HMGN1P38-201ENST00000431116 GMPSP49915 693 aaPredicted RBP13.04□□□□□ -0.32
HMGN1P38-201ENST00000431116 RPS8P62241 208 aaKnown RBP13.04□□□□□ -0.32
HMGN1P38-201ENST00000431116 GPSM2P81274 684 aa13.04□□□□□ -0.32
HMGN1P38-201ENST00000431116 USP50Q70EL3 339 aaPredicted RBP13.04□□□□□ -0.32
HMGN1P38-201ENST00000431116 PI4KAP1Q8N8J0 262 aa13.04□□□□□ -0.32
HMGN1P38-201ENST00000431116 CCDC85AQ96PX6 553 aaPredicted RBP13.04□□□□□ -0.32
HMGN1P38-201ENST00000431116 BCL2L13Q9BXK5 485 aa13.04□□□□□ -0.32
HMGN1P38-201ENST00000431116 SEC31BQ9NQW1 1179 aa13.04□□□□□ -0.32
HMGN1P38-201ENST00000431116 SALL2Q9Y467 1007 aaPredicted RBP13.04□□□□□ -0.32
HMGN1P38-201ENST00000431116 CDHR2Q9BYE9 1310 aa13.04□□□□□ -0.32
HMGN1P38-201ENST00000431116 SCN9AQ15858 1988 aa13.03□□□□□ -0.32
HMGN1P38-201ENST00000431116 YDJCA8MPS7 323 aa13.03□□□□□ -0.32
HMGN1P38-201ENST00000431116 C6orf229H3BNL8 230 aa13.03□□□□□ -0.32
HMGN1P38-201ENST00000431116 RIMBP2O15034 1052 aa13.03□□□□□ -0.32
HMGN1P38-201ENST00000431116 PDE8AO60658 829 aa13.03□□□□□ -0.32
HMGN1P38-201ENST00000431116 HSPA1AP0DMV8 641 aaKnown RBP13.03□□□□□ -0.32
HMGN1P38-201ENST00000431116 HSPA1BP0DMV9 641 aaKnown RBP13.03□□□□□ -0.32
HMGN1P38-201ENST00000431116 NEXNQ0ZGT2 675 aa13.03□□□□□ -0.32
HMGN1P38-201ENST00000431116 TNIP1Q15025 636 aa13.03□□□□□ -0.32
HMGN1P38-201ENST00000431116 WASHC4Q2M389 1173 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms