RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 SMC1AQ14683 1233 aaKnown RBP6.21□□□□□ -1.42
PTPN4-203ENST00000430976 ATP2B3Q16720 1220 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 PNISRQ8TF01 805 aaKnown RBP6.21□□□□□ -1.42
PTPN4-203ENST00000430976 BHMTQ93088 406 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 IL17RAQ96F46 866 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 GOLGA6L10A6NI86 522 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 GBP2P32456 591 aaPredicted RBP6.21□□□□□ -1.42
PTPN4-203ENST00000430976 NF2P35240 595 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 MAGEA8P43361 318 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 RAD51AP2Q09MP3 1159 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 CCDC93Q567U6 631 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 CCDC178Q5BJE1 867 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 IQCA1Q86XH1 822 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 STAG2Q8N3U4 1231 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 TNMDQ9H2S6 317 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 KMT5AQ9NQR1 393 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 TBC1D7Q9P0N9 293 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 F8W031 263 aaPredicted RBP6.2□□□□□ -1.42
PTPN4-203ENST00000430976 CAVIN2O95810 425 aa6.2□□□□□ -1.42
PTPN4-203ENST00000430976 MYL1P05976 194 aa6.2□□□□□ -1.42
PTPN4-203ENST00000430976 NMIQ13287 307 aaPredicted RBP6.2□□□□□ -1.42
PTPN4-203ENST00000430976 EXOC6Q8TAG9 804 aa6.2□□□□□ -1.42
PTPN4-203ENST00000430976 EPSTI1Q96J88 318 aa6.2□□□□□ -1.42
PTPN4-203ENST00000430976 LARP6Q9BRS8 491 aaKnown RBP6.2□□□□□ -1.42
PTPN4-203ENST00000430976 CC2D2AQ9P2K1 1620 aa6.2□□□□□ -1.42
PTPN4-203ENST00000430976 STK25O00506 426 aa6.2□□□□□ -1.42
PTPN4-203ENST00000430976 USP4Q13107 963 aa6.2□□□□□ -1.42
PTPN4-203ENST00000430976 RASA3Q14644 834 aa6.2□□□□□ -1.42
PTPN4-203ENST00000430976 TCEAL1Q15170 157 aa6.2□□□□□ -1.42
PTPN4-203ENST00000430976 NKX1-1Q15270 411 aaPredicted RBP6.2□□□□□ -1.42
PTPN4-203ENST00000430976 RNF187Q5TA31 235 aaPredicted RBP6.2□□□□□ -1.42
PTPN4-203ENST00000430976 NT5DC4Q86YG4 428 aa6.2□□□□□ -1.42
PTPN4-203ENST00000430976 N4BP2L2Q92802 583 aaPredicted RBP6.2□□□□□ -1.42
PTPN4-203ENST00000430976 SMAD5Q99717 465 aaKnown RBP6.2□□□□□ -1.42
PTPN4-203ENST00000430976 hCG_1984214I3L0E3 225 aa6.2□□□□□ -1.42
PTPN4-203ENST00000430976 STIP1P31948 543 aaKnown RBP6.2□□□□□ -1.42
PTPN4-203ENST00000430976 NASPP49321 788 aaPredicted RBP6.2□□□□□ -1.42
PTPN4-203ENST00000430976 CCSAPQ6IQ19 270 aaPredicted RBP6.2□□□□□ -1.42
PTPN4-203ENST00000430976 MICALCLQ6ZW33 695 aa6.2□□□□□ -1.42
PTPN4-203ENST00000430976 RAVER1Q8IY67 606 aaKnown RBP6.2□□□□□ -1.42
PTPN4-203ENST00000430976 LRRCC1Q9C099 1032 aa6.2□□□□□ -1.42
PTPN4-203ENST00000430976 PHACTR1Q9C0D0 580 aa6.2□□□□□ -1.42
PTPN4-203ENST00000430976 SPATA7Q9P0W8 599 aa6.2□□□□□ -1.42
PTPN4-203ENST00000430976 TBCAO75347 108 aaKnown RBP6.19□□□□□ -1.42
PTPN4-203ENST00000430976 RBP3P10745 1247 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 TMOD1P28289 359 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 RBM20Q5T481 1227 aaKnown RBP6.19□□□□□ -1.42
PTPN4-203ENST00000430976 ACBD5Q5T8D3 534 aaPredicted RBP6.19□□□□□ -1.42
PTPN4-203ENST00000430976 NAA16Q6N069 864 aaPredicted RBP6.19□□□□□ -1.42
PTPN4-203ENST00000430976 PARP9Q8IXQ6 854 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 ZFPM2Q8WW38 1151 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 NLRP7Q8WX94 980 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 CCDC114Q96M63 670 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 PIF1Q9H611 641 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 LSM1O15116 133 aaKnown RBP6.19□□□□□ -1.42
PTPN4-203ENST00000430976 HSPA1AP0DMV8 641 aaKnown RBP6.19□□□□□ -1.42
PTPN4-203ENST00000430976 HSPA1BP0DMV9 641 aaKnown RBP6.19□□□□□ -1.42
PTPN4-203ENST00000430976 INPP5BP32019 993 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 PDE4DQ08499 809 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 STK3Q13188 491 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 CDC37Q16543 378 aaPredicted RBP6.19□□□□□ -1.42
PTPN4-203ENST00000430976 MUC3BQ9H195 1237 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 COMMD8Q9NX08 183 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 LZTS1Q9Y250 596 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 DAAM1Q9Y4D1 1078 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 CEP104O60308 925 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 ZNF132P52740 706 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 NOLC1Q14978 699 aaKnown RBP eCLIP6.19□□□□□ -1.42
PTPN4-203ENST00000430976 SYCP1Q15431 976 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 TRIM68Q6AZZ1 485 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 SDE2Q6IQ49 451 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 KLHL10Q6JEL2 608 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 LARGE2Q8N3Y3 721 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 CCDC191Q8NCU4 936 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 TNIP2Q8NFZ5 429 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 SH3GL1Q99961 368 aa6.19□□□□□ -1.42
PTPN4-203ENST00000430976 POLR3CQ9BUI4 534 aaPredicted RBP6.19□□□□□ -1.42
PTPN4-203ENST00000430976 RASA4BC9J798 803 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 HNRNPH2P55795 449 aaKnown RBP6.18□□□□□ -1.42
PTPN4-203ENST00000430976 WTAPQ15007 396 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 ASIC2Q16515 512 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 HS1BP3Q53T59 392 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 KRT222Q8N1A0 295 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 NEK1Q96PY6 1258 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 STK31Q9BXU1 1019 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 BACH2Q9BYV9 841 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 TBC1D2BQ9UPU7 963 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 PLIN1O60240 522 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 RNASEH2AO75792 299 aaKnown RBP6.18□□□□□ -1.42
PTPN4-203ENST00000430976 NOP2P46087 812 aaKnown RBP6.18□□□□□ -1.42
PTPN4-203ENST00000430976 TMCO3Q6UWJ1 677 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 ZNF713Q8N859 430 aaPredicted RBP6.18□□□□□ -1.42
PTPN4-203ENST00000430976 GSDMBQ8TAX9 411 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 MIPOL1Q8TD10 442 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 SPOCK2Q92563 424 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 DHRS1Q96LJ7 313 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 GPR101Q96P66 508 aaPredicted RBP6.18□□□□□ -1.42
PTPN4-203ENST00000430976 INCENPQ9NQS7 918 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 BLOC1S6Q9UL45 172 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 MKL2Q9ULH7 1088 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms