RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 BBOX1O75936 387 aa16.12■□□□□ 0.17
SMPD4-204ENST00000430682 SLC4A2P04920 1241 aa16.12■□□□□ 0.17
SMPD4-204ENST00000430682 FSTL1Q12841 308 aa16.12■□□□□ 0.17
SMPD4-204ENST00000430682 GRAPQ13588 217 aa16.12■□□□□ 0.17
SMPD4-204ENST00000430682 KSR2Q6VAB6 950 aa16.12■□□□□ 0.17
SMPD4-204ENST00000430682 DDX46Q7L014 1031 aaKnown RBP16.12■□□□□ 0.17
SMPD4-204ENST00000430682 SP8Q8IXZ3 490 aa16.12■□□□□ 0.17
SMPD4-204ENST00000430682 DNAJC5GQ8N7S2 189 aa16.12■□□□□ 0.17
SMPD4-204ENST00000430682 GRAPLQ8TC17 118 aaPredicted RBP16.12■□□□□ 0.17
SMPD4-204ENST00000430682 ADAMTSL1Q8N6G6 1762 aa16.12■□□□□ 0.17
SMPD4-204ENST00000430682 ZNF521Q96K83 1311 aa16.12■□□□□ 0.17
SMPD4-204ENST00000430682 ZBTB38Q8NAP3 1195 aaPredicted RBP16.11■□□□□ 0.17
SMPD4-204ENST00000430682 CCDC191Q8NCU4 936 aa16.11■□□□□ 0.17
SMPD4-204ENST00000430682 L3MBTL3Q96JM7 780 aaPredicted RBP16.11■□□□□ 0.17
SMPD4-204ENST00000430682 RTFDC1Q9BY42 306 aaPredicted RBP16.11■□□□□ 0.17
SMPD4-204ENST00000430682 SEC31BQ9NQW1 1179 aa16.11■□□□□ 0.17
SMPD4-204ENST00000430682 PCCAP05165 728 aaPredicted RBP16.1■□□□□ 0.17
SMPD4-204ENST00000430682 AOC3Q16853 763 aa16.1■□□□□ 0.17
SMPD4-204ENST00000430682 CWF19L2Q2TBE0 894 aaKnown RBP16.1■□□□□ 0.17
SMPD4-204ENST00000430682 SMC1BQ8NDV3 1235 aa16.1■□□□□ 0.17
SMPD4-204ENST00000430682 CWC25Q9NXE8 425 aaPredicted RBP16.1■□□□□ 0.17
SMPD4-204ENST00000430682 APLP1P51693 650 aa16.09■□□□□ 0.17
SMPD4-204ENST00000430682 LARGE2Q8N3Y3 721 aa16.09■□□□□ 0.17
SMPD4-204ENST00000430682 MPNDQ8N594 471 aa16.09■□□□□ 0.17
SMPD4-204ENST00000430682 STK31Q9BXU1 1019 aa16.09■□□□□ 0.17
SMPD4-204ENST00000430682 TAF1DQ9H5J8 278 aaPredicted RBP16.09■□□□□ 0.17
SMPD4-204ENST00000430682 SCN9AQ15858 1988 aa16.09■□□□□ 0.17
SMPD4-204ENST00000430682 PPIP5K2O43314 1243 aa16.08■□□□□ 0.16
SMPD4-204ENST00000430682 DDX58O95786 925 aaKnown RBP16.08■□□□□ 0.16
SMPD4-204ENST00000430682 FLIIQ13045 1269 aa16.08■□□□□ 0.16
SMPD4-204ENST00000430682 GRIPAP1Q4V328 841 aa16.08■□□□□ 0.16
SMPD4-204ENST00000430682 JDP2Q8WYK2 163 aa16.08■□□□□ 0.16
SMPD4-204ENST00000430682 CCDC85AQ96PX6 553 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-204ENST00000430682 NEURL1BA8MQ27 555 aa16.07■□□□□ 0.16
SMPD4-204ENST00000430682 DPP8Q6V1X1 898 aaPredicted RBP16.07■□□□□ 0.16
SMPD4-204ENST00000430682 GPC2Q8N158 579 aa16.07■□□□□ 0.16
SMPD4-204ENST00000430682 GJA3Q9Y6H8 435 aa16.07■□□□□ 0.16
SMPD4-204ENST00000430682 PDE8AO60658 829 aa16.06■□□□□ 0.16
SMPD4-204ENST00000430682 GPSM2P81274 684 aa16.06■□□□□ 0.16
SMPD4-204ENST00000430682 GPR101Q96P66 508 aaPredicted RBP16.06■□□□□ 0.16
SMPD4-204ENST00000430682 CHMP4AQ9BY43 222 aa16.06■□□□□ 0.16
SMPD4-204ENST00000430682 POLLQ9UGP5 575 aa16.06■□□□□ 0.16
SMPD4-204ENST00000430682 CDHR2Q9BYE9 1310 aa16.05■□□□□ 0.16
SMPD4-204ENST00000430682 YDJCA8MPS7 323 aa16.05■□□□□ 0.16
SMPD4-204ENST00000430682 H7C1W4 665 aa16.05■□□□□ 0.16
SMPD4-204ENST00000430682 SCNN1DP51172 638 aa16.05■□□□□ 0.16
SMPD4-204ENST00000430682 RPS8P62241 208 aaKnown RBP16.05■□□□□ 0.16
SMPD4-204ENST00000430682 CXCL9Q07325 125 aa16.05■□□□□ 0.16
SMPD4-204ENST00000430682 KIAA2012Q0VF49 1180 aa16.05■□□□□ 0.16
SMPD4-204ENST00000430682 CHADLQ6NUI6 762 aa16.05■□□□□ 0.16
SMPD4-204ENST00000430682 HACL1Q9UJ83 578 aa16.05■□□□□ 0.16
SMPD4-204ENST00000430682 POLR2AP24928 1970 aaKnown RBP16.04■□□□□ 0.16
SMPD4-204ENST00000430682 IQCA1LA6NCM1 817 aa16.04■□□□□ 0.16
SMPD4-204ENST00000430682 WTIPA6NIX2 430 aaPredicted RBP16.04■□□□□ 0.16
SMPD4-204ENST00000430682 F6X3S4 739 aa16.04■□□□□ 0.16
SMPD4-204ENST00000430682 EPHX2P34913 555 aa16.04■□□□□ 0.16
SMPD4-204ENST00000430682 EPS15P42566 896 aa16.04■□□□□ 0.16
SMPD4-204ENST00000430682 CASP7P55210 303 aa16.04■□□□□ 0.16
SMPD4-204ENST00000430682 EIF6P56537 245 aaKnown RBP16.04■□□□□ 0.16
SMPD4-204ENST00000430682 FKBP5Q13451 457 aaPredicted RBP16.04■□□□□ 0.16
SMPD4-204ENST00000430682 NIM1KQ8IY84 436 aa16.04■□□□□ 0.16
SMPD4-204ENST00000430682 TMC4Q7Z404 712 aa16.03■□□□□ 0.16
SMPD4-204ENST00000430682 SUPT20HQ8NEM7 779 aa16.03■□□□□ 0.16
SMPD4-204ENST00000430682 TTLL11Q8NHH1 800 aa16.03■□□□□ 0.16
SMPD4-204ENST00000430682 DNAAF4Q8WXU2 420 aa16.03■□□□□ 0.16
SMPD4-204ENST00000430682 TMX4Q9H1E5 349 aaPredicted RBP16.03■□□□□ 0.16
SMPD4-204ENST00000430682 VPS33BQ9H267 617 aa16.03■□□□□ 0.16
SMPD4-204ENST00000430682 ZNRF3Q9ULT6 936 aa16.03■□□□□ 0.16
SMPD4-204ENST00000430682 NSFL1CQ9UNZ2 370 aaKnown RBP16.03■□□□□ 0.16
SMPD4-204ENST00000430682 PSME4Q14997 1843 aa16.03■□□□□ 0.16
SMPD4-204ENST00000430682 ITGBL1O95965 494 aaPredicted RBP16.02■□□□□ 0.16
SMPD4-204ENST00000430682 CTSWP56202 376 aa16.02■□□□□ 0.16
SMPD4-204ENST00000430682 GCKRQ14397 625 aa16.02■□□□□ 0.16
SMPD4-204ENST00000430682 EAPPQ56P03 285 aaPredicted RBP16.02■□□□□ 0.16
SMPD4-204ENST00000430682 UBE3BQ7Z3V4 1068 aa16.02■□□□□ 0.16
SMPD4-204ENST00000430682 TBC1D16Q8TBP0 767 aa16.02■□□□□ 0.16
SMPD4-204ENST00000430682 MYH16Q9H6N6 1097 aa16.02■□□□□ 0.16
SMPD4-204ENST00000430682 GREM2Q9H772 168 aa16.02■□□□□ 0.16
SMPD4-204ENST00000430682 KCNQ5Q9NR82 932 aa16.02■□□□□ 0.16
SMPD4-204ENST00000430682 ZNF646O15015 1829 aaPredicted RBP16.01■□□□□ 0.15
SMPD4-204ENST00000430682 A0A1B0GUL6 1792 aa16.01■□□□□ 0.15
SMPD4-204ENST00000430682 SHTN1A0MZ66 631 aa16.01■□□□□ 0.15
SMPD4-204ENST00000430682 RIMBP2O15034 1052 aa16.01■□□□□ 0.15
SMPD4-204ENST00000430682 RAD17O75943 681 aa16.01■□□□□ 0.15
SMPD4-204ENST00000430682 NEXNQ0ZGT2 675 aa16.01■□□□□ 0.15
SMPD4-204ENST00000430682 CCDC152Q4G0S7 254 aa16.01■□□□□ 0.15
SMPD4-204ENST00000430682 LDHDQ86WU2 507 aa16.01■□□□□ 0.15
SMPD4-204ENST00000430682 CDCA7LQ96GN5 454 aa16.01■□□□□ 0.15
SMPD4-204ENST00000430682 PASKQ96RG2 1323 aa16■□□□□ 0.15
SMPD4-204ENST00000430682 TRPM7Q96QT4 1865 aa16■□□□□ 0.15
SMPD4-204ENST00000430682 FMR1Q06787 632 aaKnown RBP eCLIP16■□□□□ 0.15
SMPD4-204ENST00000430682 BEND3Q5T5X7 828 aa16■□□□□ 0.15
SMPD4-204ENST00000430682 LINS1Q8NG48 757 aa16■□□□□ 0.15
SMPD4-204ENST00000430682 DBNDD1Q9H9R9 158 aa16■□□□□ 0.15
SMPD4-204ENST00000430682 C6orf229H3BNL8 230 aa15.99■□□□□ 0.15
SMPD4-204ENST00000430682 GMPSP49915 693 aaPredicted RBP15.99■□□□□ 0.15
SMPD4-204ENST00000430682 DOK7Q18PE1 504 aa15.99■□□□□ 0.15
SMPD4-204ENST00000430682 WASHC4Q2M389 1173 aa15.99■□□□□ 0.15
SMPD4-204ENST00000430682 MAP1SQ66K74 1059 aaPredicted RBP15.99■□□□□ 0.15
SMPD4-204ENST00000430682 KLRG1Q96E93 195 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms