RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 GRAPQ13588 217 aa21.78■■□□□ 1.08
UBE3D-204ENST00000430071 AOC3Q16853 763 aa21.78■■□□□ 1.08
UBE3D-204ENST00000430071 SP8Q8IXZ3 490 aa21.78■■□□□ 1.08
UBE3D-204ENST00000430071 GRAPLQ8TC17 118 aaPredicted RBP21.78■■□□□ 1.08
UBE3D-204ENST00000430071 L3MBTL3Q96JM7 780 aaPredicted RBP21.78■■□□□ 1.08
UBE3D-204ENST00000430071 METTL22Q9BUU2 404 aaPredicted RBP21.78■■□□□ 1.08
UBE3D-204ENST00000430071 MAP3K2Q9Y2U5 619 aa21.78■■□□□ 1.08
UBE3D-204ENST00000430071 ADAMTSL1Q8N6G6 1762 aa21.77■■□□□ 1.08
UBE3D-204ENST00000430071 PI4KAP2A4QPH2 592 aa21.77■■□□□ 1.08
UBE3D-204ENST00000430071 HNRNPUQ00839 825 aaKnown RBP eCLIP21.77■■□□□ 1.08
UBE3D-204ENST00000430071 SF3B3Q15393 1217 aaKnown RBP21.77■■□□□ 1.08
UBE3D-204ENST00000430071 LARGE2Q8N3Y3 721 aa21.77■■□□□ 1.08
UBE3D-204ENST00000430071 PI4KAP1Q8N8J0 262 aa21.77■■□□□ 1.08
UBE3D-204ENST00000430071 BBOX1O75936 387 aa21.76■■□□□ 1.07
UBE3D-204ENST00000430071 IGKV5-2P06315 115 aa21.76■■□□□ 1.07
UBE3D-204ENST00000430071 TAF1DQ9H5J8 278 aaPredicted RBP21.76■■□□□ 1.07
UBE3D-204ENST00000430071 SLC4A2P04920 1241 aa21.75■■□□□ 1.07
UBE3D-204ENST00000430071 EXOSC9Q06265 439 aaKnown RBP21.75■■□□□ 1.07
UBE3D-204ENST00000430071 MPNDQ8N594 471 aa21.75■■□□□ 1.07
UBE3D-204ENST00000430071 ZBTB38Q8NAP3 1195 aaPredicted RBP21.75■■□□□ 1.07
UBE3D-204ENST00000430071 JDP2Q8WYK2 163 aa21.75■■□□□ 1.07
UBE3D-204ENST00000430071 SEC31BQ9NQW1 1179 aa21.75■■□□□ 1.07
UBE3D-204ENST00000430071 PPIP5K2O43314 1243 aa21.74■■□□□ 1.07
UBE3D-204ENST00000430071 VAMP4O75379 141 aa21.74■■□□□ 1.07
UBE3D-204ENST00000430071 KSR2Q6VAB6 950 aa21.74■■□□□ 1.07
UBE3D-204ENST00000430071 CCDC191Q8NCU4 936 aa21.74■■□□□ 1.07
UBE3D-204ENST00000430071 RTFDC1Q9BY42 306 aaPredicted RBP21.74■■□□□ 1.07
UBE3D-204ENST00000430071 GJA3Q9Y6H8 435 aa21.74■■□□□ 1.07
UBE3D-204ENST00000430071 CCDC85AQ96PX6 553 aaPredicted RBP21.74■■□□□ 1.07
UBE3D-204ENST00000430071 POLR2AP24928 1970 aaKnown RBP21.73■■□□□ 1.07
UBE3D-204ENST00000430071 SCN9AQ15858 1988 aa21.73■■□□□ 1.07
UBE3D-204ENST00000430071 PCNTO95613 3336 aa21.73■■□□□ 1.07
UBE3D-204ENST00000430071 PCCAP05165 728 aaPredicted RBP21.73■■□□□ 1.07
UBE3D-204ENST00000430071 CWF19L2Q2TBE0 894 aaKnown RBP21.73■■□□□ 1.07
UBE3D-204ENST00000430071 GRIPAP1Q4V328 841 aa21.73■■□□□ 1.07
UBE3D-204ENST00000430071 DPP8Q6V1X1 898 aaPredicted RBP21.73■■□□□ 1.07
UBE3D-204ENST00000430071 STK31Q9BXU1 1019 aa21.73■■□□□ 1.07
UBE3D-204ENST00000430071 CWC25Q9NXE8 425 aaPredicted RBP21.73■■□□□ 1.07
UBE3D-204ENST00000430071 DDX58O95786 925 aaKnown RBP21.72■■□□□ 1.07
UBE3D-204ENST00000430071 EIF6P56537 245 aaKnown RBP21.72■■□□□ 1.07
UBE3D-204ENST00000430071 CHADLQ6NUI6 762 aa21.72■■□□□ 1.07
UBE3D-204ENST00000430071 GPC2Q8N158 579 aa21.72■■□□□ 1.07
UBE3D-204ENST00000430071 IQCA1LA6NCM1 817 aa21.71■■□□□ 1.07
UBE3D-204ENST00000430071 EAPPQ56P03 285 aaPredicted RBP21.71■■□□□ 1.07
UBE3D-204ENST00000430071 NIM1KQ8IY84 436 aa21.71■■□□□ 1.07
UBE3D-204ENST00000430071 HACL1Q9UJ83 578 aa21.71■■□□□ 1.07
UBE3D-204ENST00000430071 EPHX2P34913 555 aa21.7■■□□□ 1.06
UBE3D-204ENST00000430071 EPS15P42566 896 aa21.7■■□□□ 1.06
UBE3D-204ENST00000430071 GPSM2P81274 684 aa21.7■■□□□ 1.06
UBE3D-204ENST00000430071 CDCA7LQ96GN5 454 aa21.7■■□□□ 1.06
UBE3D-204ENST00000430071 GPR101Q96P66 508 aaPredicted RBP21.7■■□□□ 1.06
UBE3D-204ENST00000430071 TMX4Q9H1E5 349 aaPredicted RBP21.7■■□□□ 1.06
UBE3D-204ENST00000430071 SCNN1DP51172 638 aa21.69■■□□□ 1.06
UBE3D-204ENST00000430071 CXCL9Q07325 125 aa21.69■■□□□ 1.06
UBE3D-204ENST00000430071 FLIIQ13045 1269 aa21.69■■□□□ 1.06
UBE3D-204ENST00000430071 YDJCA8MPS7 323 aa21.68■■□□□ 1.06
UBE3D-204ENST00000430071 NEURL1BA8MQ27 555 aa21.68■■□□□ 1.06
UBE3D-204ENST00000430071 PDE8AO60658 829 aa21.68■■□□□ 1.06
UBE3D-204ENST00000430071 RPS8P62241 208 aaKnown RBP21.68■■□□□ 1.06
UBE3D-204ENST00000430071 SLFN5Q08AF3 891 aa21.68■■□□□ 1.06
UBE3D-204ENST00000430071 KIAA2012Q0VF49 1180 aa21.68■■□□□ 1.06
UBE3D-204ENST00000430071 CHMP4AQ9BY43 222 aa21.68■■□□□ 1.06
UBE3D-204ENST00000430071 POLLQ9UGP5 575 aa21.68■■□□□ 1.06
UBE3D-204ENST00000430071 LDHDQ86WU2 507 aa21.67■■□□□ 1.06
UBE3D-204ENST00000430071 SUPT20HQ8NEM7 779 aa21.67■■□□□ 1.06
UBE3D-204ENST00000430071 KLRG1Q96E93 195 aa21.67■■□□□ 1.06
UBE3D-204ENST00000430071 MYH16Q9H6N6 1097 aa21.67■■□□□ 1.06
UBE3D-204ENST00000430071 NSFL1CQ9UNZ2 370 aaKnown RBP21.67■■□□□ 1.06
UBE3D-204ENST00000430071 E9PSI1 815 aa21.66■■□□□ 1.06
UBE3D-204ENST00000430071 RAD17O75943 681 aa21.66■■□□□ 1.06
UBE3D-204ENST00000430071 ZNRF3Q9ULT6 936 aa21.66■■□□□ 1.06
UBE3D-204ENST00000430071 TRPM7Q96QT4 1865 aa21.66■■□□□ 1.06
UBE3D-204ENST00000430071 ZBED9Q6R2W3 1325 aa21.66■■□□□ 1.06
UBE3D-204ENST00000430071 CDHR2Q9BYE9 1310 aa21.66■■□□□ 1.06
UBE3D-204ENST00000430071 RIMBP2O15034 1052 aa21.65■■□□□ 1.06
UBE3D-204ENST00000430071 ITGBL1O95965 494 aaPredicted RBP21.65■■□□□ 1.06
UBE3D-204ENST00000430071 FKBP5Q13451 457 aaPredicted RBP21.65■■□□□ 1.06
UBE3D-204ENST00000430071 TMC4Q7Z404 712 aa21.65■■□□□ 1.06
UBE3D-204ENST00000430071 VPS33BQ9H267 617 aa21.65■■□□□ 1.06
UBE3D-204ENST00000430071 CLEC11AQ9Y240 323 aa21.65■■□□□ 1.06
UBE3D-204ENST00000430071 F6X3S4 739 aa21.64■■□□□ 1.06
UBE3D-204ENST00000430071 MAP1SQ66K74 1059 aaPredicted RBP21.64■■□□□ 1.06
UBE3D-204ENST00000430071 TRMT2AQ8IZ69 625 aaKnown RBP21.64■■□□□ 1.06
UBE3D-204ENST00000430071 KCNQ5Q9NR82 932 aa21.64■■□□□ 1.06
UBE3D-204ENST00000430071 PASKQ96RG2 1323 aa21.64■■□□□ 1.05
UBE3D-204ENST00000430071 PSME4Q14997 1843 aa21.64■■□□□ 1.05
UBE3D-204ENST00000430071 SHTN1A0MZ66 631 aa21.63■■□□□ 1.05
UBE3D-204ENST00000430071 WTIPA6NIX2 430 aaPredicted RBP21.63■■□□□ 1.05
UBE3D-204ENST00000430071 C6orf229H3BNL8 230 aa21.63■■□□□ 1.05
UBE3D-204ENST00000430071 H7C1W4 665 aa21.63■■□□□ 1.05
UBE3D-204ENST00000430071 FMR1Q06787 632 aaKnown RBP eCLIP21.63■■□□□ 1.05
UBE3D-204ENST00000430071 NEXNQ0ZGT2 675 aa21.63■■□□□ 1.05
UBE3D-204ENST00000430071 CCDC152Q4G0S7 254 aa21.63■■□□□ 1.05
UBE3D-204ENST00000430071 UBE3BQ7Z3V4 1068 aa21.63■■□□□ 1.05
UBE3D-204ENST00000430071 TTLL11Q8NHH1 800 aa21.63■■□□□ 1.05
UBE3D-204ENST00000430071 DNAAF4Q8WXU2 420 aa21.63■■□□□ 1.05
UBE3D-204ENST00000430071 DBNDD1Q9H9R9 158 aa21.63■■□□□ 1.05
UBE3D-204ENST00000430071 CTSWP56202 376 aa21.62■■□□□ 1.05
UBE3D-204ENST00000430071 GCKRQ14397 625 aa21.62■■□□□ 1.05
UBE3D-204ENST00000430071 TBC1D16Q8TBP0 767 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms