RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 BRPF1P55201 1214 aaPredicted RBP22.23■■□□□ 1.15
CTSD-203ENST00000429746 RPGRQ92834 1020 aaKnown RBP22.23■■□□□ 1.15
CTSD-203ENST00000429746 COL4A5P29400 1685 aa22.23■■□□□ 1.15
CTSD-203ENST00000429746 DUOX1Q9NRD9 1551 aa22.22■■□□□ 1.15
CTSD-203ENST00000429746 TOMM70O94826 608 aa22.22■■□□□ 1.15
CTSD-203ENST00000429746 SOGA3Q5TF21 947 aa22.22■■□□□ 1.15
CTSD-203ENST00000429746 RBM17Q96I25 401 aaKnown RBP22.22■■□□□ 1.15
CTSD-203ENST00000429746 RARSP54136 660 aaKnown RBP22.21■■□□□ 1.15
CTSD-203ENST00000429746 NEXNQ0ZGT2 675 aa22.21■■□□□ 1.15
CTSD-203ENST00000429746 HSPA6P17066 643 aa22.2■■□□□ 1.14
CTSD-203ENST00000429746 GRAPQ13588 217 aa22.19■■□□□ 1.14
CTSD-203ENST00000429746 CCDC93Q567U6 631 aa22.19■■□□□ 1.14
CTSD-203ENST00000429746 GRAPLQ8TC17 118 aaPredicted RBP22.19■■□□□ 1.14
CTSD-203ENST00000429746 CELF1Q92879 486 aaKnown RBP22.19■■□□□ 1.14
CTSD-203ENST00000429746 PLA2G12BQ9BX93 195 aa22.19■■□□□ 1.14
CTSD-203ENST00000429746 PTPRCP08575 1304 aa22.19■■□□□ 1.14
CTSD-203ENST00000429746 PPEF1O14829 653 aaPredicted RBP22.18■■□□□ 1.14
CTSD-203ENST00000429746 PDE8AO60658 829 aa22.18■■□□□ 1.14
CTSD-203ENST00000429746 UBE3BQ7Z3V4 1068 aa22.18■■□□□ 1.14
CTSD-203ENST00000429746 TAOK3Q9H2K8 898 aa22.17■■□□□ 1.14
CTSD-203ENST00000429746 NMRK2Q9NPI5 230 aa22.17■■□□□ 1.14
CTSD-203ENST00000429746 SEC31BQ9NQW1 1179 aa22.17■■□□□ 1.14
CTSD-203ENST00000429746 SMC4Q9NTJ3 1288 aa22.17■■□□□ 1.14
CTSD-203ENST00000429746 ATP6V0A2Q9Y487 856 aa22.17■■□□□ 1.14
CTSD-203ENST00000429746 FKBP4Q02790 459 aaKnown RBP eCLIP22.16■■□□□ 1.14
CTSD-203ENST00000429746 TTLL11Q8NHH1 800 aa22.16■■□□□ 1.14
CTSD-203ENST00000429746 RBM46Q8TBY0 533 aaKnown RBP22.16■■□□□ 1.14
CTSD-203ENST00000429746 SPEF2Q9C093 1822 aa22.15■■□□□ 1.14
CTSD-203ENST00000429746 RTL9Q8NET4 1388 aa22.15■■□□□ 1.14
CTSD-203ENST00000429746 GLTPD2A6NH11 291 aa22.15■■□□□ 1.14
CTSD-203ENST00000429746 BBOX1O75936 387 aa22.15■■□□□ 1.14
CTSD-203ENST00000429746 CTSWP56202 376 aa22.15■■□□□ 1.14
CTSD-203ENST00000429746 DDX46Q7L014 1031 aaKnown RBP22.15■■□□□ 1.14
CTSD-203ENST00000429746 C16orf71Q8IYS4 520 aaPredicted RBP22.15■■□□□ 1.14
CTSD-203ENST00000429746 PSMD1Q99460 953 aa22.15■■□□□ 1.14
CTSD-203ENST00000429746 UTYO14607 1347 aa22.14■■□□□ 1.14
CTSD-203ENST00000429746 ALDH1L1O75891 902 aa22.14■■□□□ 1.13
CTSD-203ENST00000429746 CC2D2BQ6DHV5 1058 aa22.14■■□□□ 1.13
CTSD-203ENST00000429746 SP8Q8IXZ3 490 aa22.14■■□□□ 1.13
CTSD-203ENST00000429746 RTKN2Q8IZC4 609 aa22.14■■□□□ 1.13
CTSD-203ENST00000429746 KAZALD1Q96I82 304 aa22.14■■□□□ 1.13
CTSD-203ENST00000429746 CSF1RP07333 972 aa22.13■■□□□ 1.13
CTSD-203ENST00000429746 FOXO4P98177 505 aa22.13■■□□□ 1.13
CTSD-203ENST00000429746 EPHA10Q5JZY3 1008 aa22.13■■□□□ 1.13
CTSD-203ENST00000429746 DPY19L2Q6NUT2 758 aa22.13■■□□□ 1.13
CTSD-203ENST00000429746 NOB1Q9ULX3 412 aaKnown RBP22.13■■□□□ 1.13
CTSD-203ENST00000429746 GRM8O00222 908 aa22.12■■□□□ 1.13
CTSD-203ENST00000429746 BCAR3O75815 825 aa22.12■■□□□ 1.13
CTSD-203ENST00000429746 FSTL1Q12841 308 aa22.12■■□□□ 1.13
CTSD-203ENST00000429746 SLC4A10Q6U841 1118 aa22.12■■□□□ 1.13
CTSD-203ENST00000429746 CCDC85AQ96PX6 553 aaPredicted RBP22.12■■□□□ 1.13
CTSD-203ENST00000429746 RTFDC1Q9BY42 306 aaPredicted RBP22.12■■□□□ 1.13
CTSD-203ENST00000429746 SRCIN1Q9C0H9 1055 aa22.12■■□□□ 1.13
CTSD-203ENST00000429746 GREM2Q9H772 168 aa22.12■■□□□ 1.13
CTSD-203ENST00000429746 ZNF277Q9NRM2 450 aaPredicted RBP22.12■■□□□ 1.13
CTSD-203ENST00000429746 RRAGCQ9HB90 399 aa22.11■■□□□ 1.13
CTSD-203ENST00000429746 A0A1B0GUL6 1792 aa22.11■■□□□ 1.13
CTSD-203ENST00000429746 CEP350Q5VT06 3117 aa22.11■■□□□ 1.13
CTSD-203ENST00000429746 NBPF7P0C2Y1 421 aaPredicted RBP22.1■■□□□ 1.13
CTSD-203ENST00000429746 HSP90B1P14625 803 aaKnown RBP22.1■■□□□ 1.13
CTSD-203ENST00000429746 VEGFAP15692 232 aaPredicted RBP22.1■■□□□ 1.13
CTSD-203ENST00000429746 APLP1P51693 650 aa22.1■■□□□ 1.13
CTSD-203ENST00000429746 CCDC152Q4G0S7 254 aa22.1■■□□□ 1.13
CTSD-203ENST00000429746 TNNQ9UQP3 1299 aa22.1■■□□□ 1.13
CTSD-203ENST00000429746 RPS8P62241 208 aaKnown RBP22.09■■□□□ 1.13
CTSD-203ENST00000429746 IARSP41252 1262 aaKnown RBP22.08■■□□□ 1.13
CTSD-203ENST00000429746 GRIPAP1Q4V328 841 aa22.08■■□□□ 1.13
CTSD-203ENST00000429746 TMC4Q7Z404 712 aa22.08■■□□□ 1.13
CTSD-203ENST00000429746 USP44Q9H0E7 712 aa22.08■■□□□ 1.13
CTSD-203ENST00000429746 WDR90Q96KV7 1748 aa22.08■■□□□ 1.12
CTSD-203ENST00000429746 FAM161AQ3B820 660 aa22.07■■□□□ 1.12
CTSD-203ENST00000429746 ARHGAP45Q92619 1136 aa22.07■■□□□ 1.12
CTSD-203ENST00000429746 SUCLG2Q96I99 432 aa22.07■■□□□ 1.12
CTSD-203ENST00000429746 GPSM2P81274 684 aa22.06■■□□□ 1.12
CTSD-203ENST00000429746 KIF16BQ96L93 1317 aa22.06■■□□□ 1.12
CTSD-203ENST00000429746 TRIM27P14373 513 aa22.05■■□□□ 1.12
CTSD-203ENST00000429746 POTECB2RU33 542 aa22.04■■□□□ 1.12
CTSD-203ENST00000429746 FZD9O00144 591 aa22.04■■□□□ 1.12
CTSD-203ENST00000429746 MPNDQ8N594 471 aa22.04■■□□□ 1.12
CTSD-203ENST00000429746 ANKRD44Q8N8A2 993 aa22.04■■□□□ 1.12
CTSD-203ENST00000429746 SMC1BQ8NDV3 1235 aa22.04■■□□□ 1.12
CTSD-203ENST00000429746 PODXL2Q9NZ53 605 aa22.04■■□□□ 1.12
CTSD-203ENST00000429746 POLLQ9UGP5 575 aa22.04■■□□□ 1.12
CTSD-203ENST00000429746 ZNF541Q9H0D2 1346 aa22.04■■□□□ 1.12
CTSD-203ENST00000429746 WTIPA6NIX2 430 aaPredicted RBP22.03■■□□□ 1.12
CTSD-203ENST00000429746 ITGA6P23229 1130 aa22.03■■□□□ 1.12
CTSD-203ENST00000429746 RABL6Q3YEC7 729 aaPredicted RBP22.03■■□□□ 1.12
CTSD-203ENST00000429746 API5Q9BZZ5 524 aaKnown RBP22.03■■□□□ 1.12
CTSD-203ENST00000429746 C9orf78Q9NZ63 289 aaPredicted RBP22.03■■□□□ 1.12
CTSD-203ENST00000429746 INTS3Q68E01 1043 aaKnown RBP22.02■■□□□ 1.12
CTSD-203ENST00000429746 LMBR1LQ6UX01 489 aa22.02■■□□□ 1.12
CTSD-203ENST00000429746 DPP8Q6V1X1 898 aaPredicted RBP22.02■■□□□ 1.12
CTSD-203ENST00000429746 BSDC1Q9NW68 430 aaPredicted RBP22.02■■□□□ 1.12
CTSD-203ENST00000429746 KIAA2012Q0VF49 1180 aa22.01■■□□□ 1.11
CTSD-203ENST00000429746 AOC3Q16853 763 aa22.01■■□□□ 1.11
CTSD-203ENST00000429746 ANKRD18AQ8IVF6 992 aa22.01■■□□□ 1.11
CTSD-203ENST00000429746 SCN9AQ15858 1988 aa22.01■■□□□ 1.11
CTSD-203ENST00000429746 ZNF646O15015 1829 aaPredicted RBP22.01■■□□□ 1.11
CTSD-203ENST00000429746 CCT4P50991 539 aaKnown RBP22■■□□□ 1.11
CTSD-203ENST00000429746 ATF7IPQ6VMQ6 1270 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms