RNA–Protein interactions for RNA: ENST00000429534.1

SEC13P1-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component pseudogene 1, humanhuman

BASIC

Gene SEC13P1, Length 948 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13P1-201ENST00000429534 ABCC4O15439 1325 aa13.98□□□□□ -0.17
SEC13P1-201ENST00000429534 LTBP3Q9NS15 1303 aa13.98□□□□□ -0.17
SEC13P1-201ENST00000429534 PPEF1O14829 653 aaPredicted RBP13.98□□□□□ -0.17
SEC13P1-201ENST00000429534 BCAR3O75815 825 aa13.98□□□□□ -0.17
SEC13P1-201ENST00000429534 CTSWP56202 376 aa13.98□□□□□ -0.17
SEC13P1-201ENST00000429534 SP8Q8IXZ3 490 aa13.98□□□□□ -0.17
SEC13P1-201ENST00000429534 TTLL11Q8NHH1 800 aa13.98□□□□□ -0.17
SEC13P1-201ENST00000429534 HDAC5Q9UQL6 1122 aa13.98□□□□□ -0.17
SEC13P1-201ENST00000429534 ATP6V0A2Q9Y487 856 aa13.98□□□□□ -0.17
SEC13P1-201ENST00000429534 ANKRD36CQ5JPF3 1778 aa13.97□□□□□ -0.17
SEC13P1-201ENST00000429534 LMNB1P20700 586 aa13.97□□□□□ -0.17
SEC13P1-201ENST00000429534 RPS8P62241 208 aaKnown RBP13.97□□□□□ -0.17
SEC13P1-201ENST00000429534 ATF7IPQ6VMQ6 1270 aa13.97□□□□□ -0.17
SEC13P1-201ENST00000429534 FRAT1Q92837 279 aaPredicted RBP13.97□□□□□ -0.17
SEC13P1-201ENST00000429534 ANKRD31Q8N7Z5 1873 aa13.97□□□□□ -0.17
SEC13P1-201ENST00000429534 UTYO14607 1347 aa13.96□□□□□ -0.17
SEC13P1-201ENST00000429534 NFKBIEO00221 500 aa13.96□□□□□ -0.17
SEC13P1-201ENST00000429534 CSF1RP07333 972 aa13.96□□□□□ -0.17
SEC13P1-201ENST00000429534 ZKSCAN2Q63HK3 967 aa13.96□□□□□ -0.17
SEC13P1-201ENST00000429534 CDC5LQ99459 802 aaKnown RBP13.96□□□□□ -0.17
SEC13P1-201ENST00000429534 TAOK3Q9H2K8 898 aa13.96□□□□□ -0.17
SEC13P1-201ENST00000429534 RTL9Q8NET4 1388 aa13.96□□□□□ -0.18
SEC13P1-201ENST00000429534 ZBTB22O15209 634 aa13.95□□□□□ -0.18
SEC13P1-201ENST00000429534 FKBP4Q02790 459 aaKnown RBP eCLIP13.95□□□□□ -0.18
SEC13P1-201ENST00000429534 C9orf131Q5VYM1 1079 aa13.95□□□□□ -0.18
SEC13P1-201ENST00000429534 INTS3Q68E01 1043 aaKnown RBP13.95□□□□□ -0.18
SEC13P1-201ENST00000429534 ANKRD18AQ8IVF6 992 aa13.95□□□□□ -0.18
SEC13P1-201ENST00000429534 PSMD1Q99460 953 aa13.95□□□□□ -0.18
SEC13P1-201ENST00000429534 CACNA1FO60840 1977 aa13.94□□□□□ -0.18
SEC13P1-201ENST00000429534 TRIM27P14373 513 aa13.94□□□□□ -0.18
SEC13P1-201ENST00000429534 FOXO4P98177 505 aa13.94□□□□□ -0.18
SEC13P1-201ENST00000429534 SUPT20HQ8NEM7 779 aa13.94□□□□□ -0.18
SEC13P1-201ENST00000429534 CELF1Q92879 486 aaKnown RBP13.94□□□□□ -0.18
SEC13P1-201ENST00000429534 USP44Q9H0E7 712 aa13.94□□□□□ -0.18
SEC13P1-201ENST00000429534 VPS33BQ9H267 617 aa13.94□□□□□ -0.18
SEC13P1-201ENST00000429534 SEC31BQ9NQW1 1179 aa13.94□□□□□ -0.18
SEC13P1-201ENST00000429534 RNF181Q9P0P0 153 aa13.94□□□□□ -0.18
SEC13P1-201ENST00000429534 RCAN3Q9UKA8 241 aa13.94□□□□□ -0.18
SEC13P1-201ENST00000429534 TNRC6CQ9HCJ0 1690 aaKnown RBP13.94□□□□□ -0.18
SEC13P1-201ENST00000429534 DLEC1Q9Y238 1755 aa13.94□□□□□ -0.18
SEC13P1-201ENST00000429534 ZC3H4Q9UPT8 1303 aaKnown RBP13.93□□□□□ -0.18
SEC13P1-201ENST00000429534 NBPF7P0C2Y1 421 aaPredicted RBP13.93□□□□□ -0.18
SEC13P1-201ENST00000429534 MS4A1P11836 297 aa13.93□□□□□ -0.18
SEC13P1-201ENST00000429534 RASSF7Q02833 373 aa13.93□□□□□ -0.18
SEC13P1-201ENST00000429534 LMBR1LQ6UX01 489 aa13.93□□□□□ -0.18
SEC13P1-201ENST00000429534 OLFM4Q6UX06 510 aa13.93□□□□□ -0.18
SEC13P1-201ENST00000429534 MPNDQ8N594 471 aa13.93□□□□□ -0.18
SEC13P1-201ENST00000429534 YTHDC1Q96MU7 727 aaKnown RBP13.93□□□□□ -0.18
SEC13P1-201ENST00000429534 CCDC85AQ96PX6 553 aaPredicted RBP13.93□□□□□ -0.18
SEC13P1-201ENST00000429534 GREM2Q9H772 168 aa13.93□□□□□ -0.18
SEC13P1-201ENST00000429534 COL11A2P13942 1736 aaPredicted RBP13.93□□□□□ -0.18
SEC13P1-201ENST00000429534 ANKRD18BA2A2Z9 1011 aa13.92□□□□□ -0.18
SEC13P1-201ENST00000429534 ITGA6P23229 1130 aa13.92□□□□□ -0.18
SEC13P1-201ENST00000429534 IGHMBP2P38935 993 aaKnown RBP13.92□□□□□ -0.18
SEC13P1-201ENST00000429534 IFIT5Q13325 482 aaKnown RBP13.92□□□□□ -0.18
SEC13P1-201ENST00000429534 DPP8Q6V1X1 898 aaPredicted RBP13.92□□□□□ -0.18
SEC13P1-201ENST00000429534 RTFDC1Q9BY42 306 aaPredicted RBP13.92□□□□□ -0.18
SEC13P1-201ENST00000429534 BSDC1Q9NW68 430 aaPredicted RBP13.92□□□□□ -0.18
SEC13P1-201ENST00000429534 BRCA1P38398 1863 aaKnown RBP13.92□□□□□ -0.18
SEC13P1-201ENST00000429534 GNAI3P08754 354 aa13.91□□□□□ -0.18
SEC13P1-201ENST00000429534 UBTFL1P0CB47 393 aaPredicted RBP13.91□□□□□ -0.18
SEC13P1-201ENST00000429534 CCDC57Q2TAC2 916 aa13.91□□□□□ -0.18
SEC13P1-201ENST00000429534 FTSJ3Q8IY81 847 aaKnown RBP13.91□□□□□ -0.18
SEC13P1-201ENST00000429534 SUCLG2Q96I99 432 aa13.91□□□□□ -0.18
SEC13P1-201ENST00000429534 IARSP41252 1262 aaKnown RBP13.9□□□□□ -0.18
SEC13P1-201ENST00000429534 FAM161AQ3B820 660 aa13.9□□□□□ -0.18
SEC13P1-201ENST00000429534 RABL6Q3YEC7 729 aaPredicted RBP13.9□□□□□ -0.18
SEC13P1-201ENST00000429534 DZIP1LQ8IYY4 767 aaKnown RBP13.9□□□□□ -0.18
SEC13P1-201ENST00000429534 CLUAP1Q96AJ1 413 aa13.9□□□□□ -0.18
SEC13P1-201ENST00000429534 MPHOSPH8Q99549 860 aa13.9□□□□□ -0.18
SEC13P1-201ENST00000429534 ZNF277Q9NRM2 450 aaPredicted RBP13.9□□□□□ -0.18
SEC13P1-201ENST00000429534 NSFL1CQ9UNZ2 370 aaKnown RBP13.9□□□□□ -0.18
SEC13P1-201ENST00000429534 CHMP3Q9Y3E7 222 aa13.9□□□□□ -0.18
SEC13P1-201ENST00000429534 ARFGEF1Q9Y6D6 1849 aa13.9□□□□□ -0.18
SEC13P1-201ENST00000429534 PRELPP51888 382 aa13.89□□□□□ -0.19
SEC13P1-201ENST00000429534 TAF7LQ5H9L4 462 aa13.89□□□□□ -0.19
SEC13P1-201ENST00000429534 EPHA10Q5JZY3 1008 aa13.89□□□□□ -0.19
SEC13P1-201ENST00000429534 DPY19L2Q6NUT2 758 aa13.89□□□□□ -0.19
SEC13P1-201ENST00000429534 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.89□□□□□ -0.19
SEC13P1-201ENST00000429534 JDP2Q8WYK2 163 aa13.89□□□□□ -0.19
SEC13P1-201ENST00000429534 KAZALD1Q96I82 304 aa13.89□□□□□ -0.19
SEC13P1-201ENST00000429534 BICC1Q9H694 974 aaKnown RBP13.89□□□□□ -0.19
SEC13P1-201ENST00000429534 PODXL2Q9NZ53 605 aa13.89□□□□□ -0.19
SEC13P1-201ENST00000429534 ANKIB1Q9P2G1 1089 aa13.89□□□□□ -0.19
SEC13P1-201ENST00000429534 SLX4Q8IY92 1834 aa13.89□□□□□ -0.19
SEC13P1-201ENST00000429534 SNED1Q8TER0 1413 aa13.89□□□□□ -0.19
SEC13P1-201ENST00000429534 ZNF784Q8NCA9 323 aaPredicted RBP13.88□□□□□ -0.19
SEC13P1-201ENST00000429534 EYA3Q99504 573 aa13.88□□□□□ -0.19
SEC13P1-201ENST00000429534 ANKRD2Q9GZV1 360 aa13.88□□□□□ -0.19
SEC13P1-201ENST00000429534 MINPP1Q9UNW1 487 aa13.88□□□□□ -0.19
SEC13P1-201ENST00000429534 DDX60Q8IY21 1712 aaKnown RBP13.87□□□□□ -0.19
SEC13P1-201ENST00000429534 C6orf229H3BNL8 230 aa13.87□□□□□ -0.19
SEC13P1-201ENST00000429534 GPSM2P81274 684 aa13.87□□□□□ -0.19
SEC13P1-201ENST00000429534 LDHAL6AQ6ZMR3 332 aa13.87□□□□□ -0.19
SEC13P1-201ENST00000429534 LARGE2Q8N3Y3 721 aa13.87□□□□□ -0.19
SEC13P1-201ENST00000429534 TMEM57Q8N5G2 664 aa13.87□□□□□ -0.19
SEC13P1-201ENST00000429534 MEIS3Q99687 375 aa13.87□□□□□ -0.19
SEC13P1-201ENST00000429534 GGA1Q9UJY5 639 aa13.87□□□□□ -0.19
SEC13P1-201ENST00000429534 XDHP47989 1333 aa13.87□□□□□ -0.19
SEC13P1-201ENST00000429534 KDM2BQ8NHM5 1336 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms