RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 PSMD1Q99460 953 aa11.85□□□□□ -0.51
NEDD1-203ENST00000429527 CHMP4BQ9H444 224 aaKnown RBP11.85□□□□□ -0.51
NEDD1-203ENST00000429527 CDHR2Q9BYE9 1310 aa11.85□□□□□ -0.51
NEDD1-203ENST00000429527 NBPF5PQ86XG9 351 aaPredicted RBP11.85□□□□□ -0.51
NEDD1-203ENST00000429527 ALDH1B1P30837 517 aa11.85□□□□□ -0.51
NEDD1-203ENST00000429527 HDGFL1Q5TGJ6 251 aa11.85□□□□□ -0.51
NEDD1-203ENST00000429527 SUSD4Q5VX71 490 aa11.85□□□□□ -0.51
NEDD1-203ENST00000429527 IL17RAQ96F46 866 aa11.85□□□□□ -0.51
NEDD1-203ENST00000429527 RTFDC1Q9BY42 306 aaPredicted RBP11.85□□□□□ -0.51
NEDD1-203ENST00000429527 NFKBIEO00221 500 aa11.84□□□□□ -0.51
NEDD1-203ENST00000429527 CCDC30Q5VVM6 783 aa11.84□□□□□ -0.51
NEDD1-203ENST00000429527 CHPF2Q9P2E5 772 aa11.84□□□□□ -0.51
NEDD1-203ENST00000429527 SF3B3Q15393 1217 aaKnown RBP11.84□□□□□ -0.51
NEDD1-203ENST00000429527 XAGE3Q8WTP9 111 aa11.84□□□□□ -0.51
NEDD1-203ENST00000429527 C8orf58Q8NAV2 365 aa11.84□□□□□ -0.51
NEDD1-203ENST00000429527 KIF2CQ99661 725 aa11.84□□□□□ -0.51
NEDD1-203ENST00000429527 UTP14AQ9BVJ6 771 aaKnown RBP11.84□□□□□ -0.51
NEDD1-203ENST00000429527 LMNB1P20700 586 aa11.83□□□□□ -0.52
NEDD1-203ENST00000429527 PRELPP51888 382 aa11.83□□□□□ -0.52
NEDD1-203ENST00000429527 COPS6Q7L5N1 327 aa11.83□□□□□ -0.52
NEDD1-203ENST00000429527 GCC1Q96CN9 775 aa11.83□□□□□ -0.52
NEDD1-203ENST00000429527 TNNQ9UQP3 1299 aa11.83□□□□□ -0.52
NEDD1-203ENST00000429527 DDX11L8A8MPP1 907 aa11.83□□□□□ -0.52
NEDD1-203ENST00000429527 C22orf23Q9BZE7 217 aa11.83□□□□□ -0.52
NEDD1-203ENST00000429527 SSH1Q8WYL5 1049 aa11.82□□□□□ -0.52
NEDD1-203ENST00000429527 COL4A1P02462 1669 aa11.82□□□□□ -0.52
NEDD1-203ENST00000429527 RTKN2Q8IZC4 609 aa11.82□□□□□ -0.52
NEDD1-203ENST00000429527 PLA2G12BQ9BX93 195 aa11.82□□□□□ -0.52
NEDD1-203ENST00000429527 BCS1LQ9Y276 419 aa11.82□□□□□ -0.52
NEDD1-203ENST00000429527 IPO8O15397 1037 aaKnown RBP11.82□□□□□ -0.52
NEDD1-203ENST00000429527 HSP90B1P14625 803 aaKnown RBP11.82□□□□□ -0.52
NEDD1-203ENST00000429527 CLCN1P35523 988 aa11.82□□□□□ -0.52
NEDD1-203ENST00000429527 FKBP4Q02790 459 aaKnown RBP eCLIP11.82□□□□□ -0.52
NEDD1-203ENST00000429527 ERFEQ4G0M1 354 aa11.82□□□□□ -0.52
NEDD1-203ENST00000429527 PRPF40BQ6NWY9 871 aaKnown RBP11.82□□□□□ -0.52
NEDD1-203ENST00000429527 ANKRD13DQ6ZTN6 518 aa11.82□□□□□ -0.52
NEDD1-203ENST00000429527 CCDC191Q8NCU4 936 aa11.81□□□□□ -0.52
NEDD1-203ENST00000429527 METTL22Q9BUU2 404 aaPredicted RBP11.81□□□□□ -0.52
NEDD1-203ENST00000429527 COL4A5P29400 1685 aa11.81□□□□□ -0.52
NEDD1-203ENST00000429527 VAMP4O75379 141 aa11.81□□□□□ -0.52
NEDD1-203ENST00000429527 PIP4K2AP48426 406 aaPredicted RBP11.81□□□□□ -0.52
NEDD1-203ENST00000429527 RAB3GAP1Q15042 981 aa11.81□□□□□ -0.52
NEDD1-203ENST00000429527 KRT24Q2M2I5 525 aa11.81□□□□□ -0.52
NEDD1-203ENST00000429527 CCDC93Q567U6 631 aa11.81□□□□□ -0.52
NEDD1-203ENST00000429527 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
NEDD1-203ENST00000429527 RBM17Q96I25 401 aaKnown RBP11.81□□□□□ -0.52
NEDD1-203ENST00000429527 THSD7BQ9C0I4 1608 aa11.81□□□□□ -0.52
NEDD1-203ENST00000429527 L3MBTL3Q96JM7 780 aaPredicted RBP11.81□□□□□ -0.52
NEDD1-203ENST00000429527 ARAP2Q8WZ64 1704 aa11.8□□□□□ -0.52
NEDD1-203ENST00000429527 KIF3CO14782 793 aa11.8□□□□□ -0.52
NEDD1-203ENST00000429527 PCCAP05165 728 aaPredicted RBP11.8□□□□□ -0.52
NEDD1-203ENST00000429527 MYL6BP14649 208 aa11.8□□□□□ -0.52
NEDD1-203ENST00000429527 ZBTB7BO15156 539 aaPredicted RBP11.8□□□□□ -0.52
NEDD1-203ENST00000429527 SH3TC1Q8TE82 1336 aa11.8□□□□□ -0.52
NEDD1-203ENST00000429527 MRE11P49959 708 aa11.79□□□□□ -0.52
NEDD1-203ENST00000429527 KSR2Q6VAB6 950 aa11.79□□□□□ -0.52
NEDD1-203ENST00000429527 ZBTB38Q8NAP3 1195 aaPredicted RBP11.79□□□□□ -0.52
NEDD1-203ENST00000429527 EXOSC9Q06265 439 aaKnown RBP11.79□□□□□ -0.52
NEDD1-203ENST00000429527 C9orf131Q5VYM1 1079 aa11.79□□□□□ -0.52
NEDD1-203ENST00000429527 RBM46Q8TBY0 533 aaKnown RBP11.79□□□□□ -0.52
NEDD1-203ENST00000429527 BBOX1O75936 387 aa11.79□□□□□ -0.52
NEDD1-203ENST00000429527 DDX58O95786 925 aaKnown RBP11.79□□□□□ -0.52
NEDD1-203ENST00000429527 XRCC6P12956 609 aaKnown RBP eCLIP11.79□□□□□ -0.52
NEDD1-203ENST00000429527 MRPL50Q8N5N7 158 aaKnown RBP11.79□□□□□ -0.52
NEDD1-203ENST00000429527 ZBTB3Q9H5J0 574 aa11.79□□□□□ -0.52
NEDD1-203ENST00000429527 TWISTNBQ3B726 338 aaPredicted RBP11.78□□□□□ -0.52
NEDD1-203ENST00000429527 BICDL1Q6ZP65 573 aa11.78□□□□□ -0.52
NEDD1-203ENST00000429527 ARHGAP27Q6ZUM4 889 aa11.78□□□□□ -0.52
NEDD1-203ENST00000429527 SP8Q8IXZ3 490 aa11.78□□□□□ -0.52
NEDD1-203ENST00000429527 ATP6V0A2Q9Y487 856 aa11.78□□□□□ -0.52
NEDD1-203ENST00000429527 SPEF2Q9C093 1822 aa11.78□□□□□ -0.52
NEDD1-203ENST00000429527 SKOR2Q2VWA4 1001 aaPredicted RBP11.78□□□□□ -0.52
NEDD1-203ENST00000429527 TSPYL6Q8N831 410 aa11.78□□□□□ -0.52
NEDD1-203ENST00000429527 EIF2S2P20042 333 aaKnown RBP11.78□□□□□ -0.52
NEDD1-203ENST00000429527 CASP7P55210 303 aa11.78□□□□□ -0.52
NEDD1-203ENST00000429527 UTYO14607 1347 aa11.77□□□□□ -0.52
NEDD1-203ENST00000429527 LAMB1P07942 1786 aa11.77□□□□□ -0.52
NEDD1-203ENST00000429527 FZD9O00144 591 aa11.77□□□□□ -0.53
NEDD1-203ENST00000429527 ZBTB22O15209 634 aa11.77□□□□□ -0.53
NEDD1-203ENST00000429527 FSTL1Q12841 308 aa11.77□□□□□ -0.53
NEDD1-203ENST00000429527 NEUROD2Q15784 382 aa11.77□□□□□ -0.53
NEDD1-203ENST00000429527 CHD1LQ86WJ1 897 aa11.77□□□□□ -0.53
NEDD1-203ENST00000429527 GLTPD2A6NH11 291 aa11.77□□□□□ -0.53
NEDD1-203ENST00000429527 CYP2E1P05181 493 aaPredicted RBP11.77□□□□□ -0.53
NEDD1-203ENST00000429527 TMEM57Q8N5G2 664 aa11.77□□□□□ -0.53
NEDD1-203ENST00000429527 UBE2Q2Q8WVN8 375 aa11.77□□□□□ -0.53
NEDD1-203ENST00000429527 TAOK3Q9H2K8 898 aa11.77□□□□□ -0.53
NEDD1-203ENST00000429527 C1QTNF8P60827 252 aa11.76□□□□□ -0.53
NEDD1-203ENST00000429527 GRAPQ13588 217 aa11.76□□□□□ -0.53
NEDD1-203ENST00000429527 GRAPLQ8TC17 118 aaPredicted RBP11.76□□□□□ -0.53
NEDD1-203ENST00000429527 NLRP3Q96P20 1036 aa11.76□□□□□ -0.53
NEDD1-203ENST00000429527 PODXL2Q9NZ53 605 aa11.76□□□□□ -0.53
NEDD1-203ENST00000429527 NOB1Q9ULX3 412 aaKnown RBP11.76□□□□□ -0.53
NEDD1-203ENST00000429527 TAF1P21675 1872 aa11.76□□□□□ -0.53
NEDD1-203ENST00000429527 H7C1W4 665 aa11.76□□□□□ -0.53
NEDD1-203ENST00000429527 C3orf67Q6ZVT6 689 aa11.76□□□□□ -0.53
NEDD1-203ENST00000429527 SMC4Q9NTJ3 1288 aa11.76□□□□□ -0.53
NEDD1-203ENST00000429527 SUPT20HQ8NEM7 779 aa11.76□□□□□ -0.53
NEDD1-203ENST00000429527 RRAGDQ9NQL2 400 aaPredicted RBP11.76□□□□□ -0.53
NEDD1-203ENST00000429527 PPEF1O14829 653 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms