RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 ZNF483Q8TF39 744 aaPredicted RBP10.33□□□□□ -0.76
CDC42BPA-206ENST00000429440 TSPOAP1O95153 1857 aa10.33□□□□□ -0.76
CDC42BPA-206ENST00000429440 CLTCQ00610 1675 aaKnown RBP10.32□□□□□ -0.76
CDC42BPA-206ENST00000429440 CAVIN2O95810 425 aa10.32□□□□□ -0.76
CDC42BPA-206ENST00000429440 SARM1Q6SZW1 724 aa10.32□□□□□ -0.76
CDC42BPA-206ENST00000429440 ARMC2Q8NEN0 867 aa10.32□□□□□ -0.76
CDC42BPA-206ENST00000429440 MRFAP1L1Q96HT8 127 aa10.32□□□□□ -0.76
CDC42BPA-206ENST00000429440 SRGAP3O43295 1099 aa10.32□□□□□ -0.76
CDC42BPA-206ENST00000429440 CCZ1BP86790 482 aa10.32□□□□□ -0.76
CDC42BPA-206ENST00000429440 CCZ1P86791 482 aaPredicted RBP10.32□□□□□ -0.76
CDC42BPA-206ENST00000429440 SCRN1Q12765 414 aa10.32□□□□□ -0.76
CDC42BPA-206ENST00000429440 PLEKHO1Q53GL0 409 aaPredicted RBP10.32□□□□□ -0.76
CDC42BPA-206ENST00000429440 FBXO31Q5XUX0 539 aaPredicted RBP10.32□□□□□ -0.76
CDC42BPA-206ENST00000429440 KLHL23Q8NBE8 558 aa10.32□□□□□ -0.76
CDC42BPA-206ENST00000429440 LRRN4CLQ8ND94 238 aa10.32□□□□□ -0.76
CDC42BPA-206ENST00000429440 SPATS2LQ9NUQ6 558 aaKnown RBP10.32□□□□□ -0.76
CDC42BPA-206ENST00000429440 ATP6V1DQ9Y5K8 247 aa10.32□□□□□ -0.76
CDC42BPA-206ENST00000429440 PSDA5PKW4 1024 aaPredicted RBP10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 H3BQF6 201 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 RTN2O75298 545 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 MYBL2P10244 700 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 PAX7P23759 505 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 NF2P35240 595 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 WWC2Q6AWC2 1192 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 POTEDQ86YR6 584 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 CCDC34Q96HJ3 373 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 JPH2Q9BR39 696 aaPredicted RBP10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 CBX8Q9HC52 389 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 PHLPP2Q6ZVD8 1323 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 CD163L1Q9NR16 1453 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 SETD1AO15047 1707 aaKnown RBP10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 TYRO3Q06418 890 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 PREPLQ4J6C6 727 aaPredicted RBP10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 CC2D2BQ6DHV5 1058 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 LUZP1Q86V48 1076 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 SRCIN1Q9C0H9 1055 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 SLC24A3Q9HC58 644 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 CABP2Q9NPB3 220 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 EVC2Q86UK5 1308 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 RTL1A6NKG5 1358 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 AGLP35573 1532 aa10.31□□□□□ -0.76
CDC42BPA-206ENST00000429440 CHUKO15111 745 aa10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 CAND2O75155 1236 aa10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 GSPT1P15170 499 aaKnown RBP10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 SOS1Q07889 1333 aaPredicted RBP10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 APOBRQ0VD83 1088 aa10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 MAP3K11Q16584 847 aa10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 TTC41PQ6P2S7 1318 aa10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 PRPF38AQ8NAV1 312 aaKnown RBP10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 N4BP2L2Q92802 583 aaPredicted RBP10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 VPS18Q9P253 973 aa10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 CPSF2Q9P2I0 782 aaKnown RBP10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 ALKQ9UM73 1620 aa10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 CNPY2Q9Y2B0 182 aa10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 A0A1W2PP64 1363 aa10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 CCDC151A5D8V7 595 aa10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 CHMLP26374 656 aa10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 CCDC96Q2M329 555 aa10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 LRRFIP1Q32MZ4 808 aaKnown RBP10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 CPLX2Q6PUV4 134 aaKnown RBP10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 RUNDC1Q96C34 613 aa10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 CABS1Q96KC9 395 aa10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 IRAK4Q9NWZ3 460 aa10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 TRMT1Q9NXH9 659 aaKnown RBP10.3□□□□□ -0.76
CDC42BPA-206ENST00000429440 ABCC11Q96J66 1382 aa10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 KINO60870 393 aaKnown RBP10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 RDXP35241 583 aaKnown RBP10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 NEK4P51957 841 aa10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 RBM5P52756 815 aaKnown RBP eCLIP10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 GSDMDP57764 484 aa10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 DHX8Q14562 1220 aaKnown RBP10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 BRD3Q15059 726 aa10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 RBBP5Q15291 538 aaKnown RBP10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 PDCD2Q16342 344 aaPredicted RBP10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 C1QTNF12Q5T7M4 302 aa10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 DNAI1Q9UI46 699 aa10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 ANKRD26Q9UPS8 1709 aa10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 YTHDC2Q9H6S0 1430 aaKnown RBP10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 CCDC69A6NI79 296 aa10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 MTHFSP49914 203 aa10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 FAM69CQ0P6D2 419 aa10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 SETDB1Q15047 1291 aa10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 TMEM57Q8N5G2 664 aa10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 HNRNPLLQ8WVV9 542 aaKnown RBP10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 KCNB2Q92953 911 aa10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 BAG1Q99933 345 aaPredicted RBP10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 AKAP2Q9Y2D5 859 aa10.29□□□□□ -0.76
CDC42BPA-206ENST00000429440 ADGRB2O60241 1585 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 NSD2O96028 1365 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 A0A1B0GUA9 196 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 EXOC5O00471 708 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 ZSCAN22P10073 491 aaPredicted RBP10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 ETF1P62495 437 aaKnown RBP10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 GNAI1P63096 354 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 SAFB2Q14151 953 aaKnown RBP eCLIP10.28□□□□□ -0.766e-6■■■□□ 18.1
CDC42BPA-206ENST00000429440 LONRF2Q1L5Z9 754 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 SLC5A9Q2M3M2 681 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 WLSQ5T9L3 541 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 TTC22Q5TAA0 569 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 THUMPD2Q9BTF0 503 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms