RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 PNPLA7Q6ZV29 1317 aa11.03□□□□□ -0.64
SMC6-204ENST00000428868 RIC1Q4ADV7 1423 aa11.02□□□□□ -0.64
SMC6-204ENST00000428868 AKAP11Q9UKA4 1901 aa11.02□□□□□ -0.65
SMC6-204ENST00000428868 SASH1O94885 1247 aa11.02□□□□□ -0.65
SMC6-204ENST00000428868 GYS1P13807 737 aa11.02□□□□□ -0.65
SMC6-204ENST00000428868 ADRA2BP18089 450 aa11.02□□□□□ -0.65
SMC6-204ENST00000428868 PTPN12Q05209 780 aaKnown RBP11.02□□□□□ -0.65
SMC6-204ENST00000428868 NFIXQ14938 502 aa11.02□□□□□ -0.65
SMC6-204ENST00000428868 ERFEQ4G0M1 354 aa11.02□□□□□ -0.65
SMC6-204ENST00000428868 PARP10Q53GL7 1025 aa11.02□□□□□ -0.65
SMC6-204ENST00000428868 COL23A1Q86Y22 540 aaPredicted RBP11.02□□□□□ -0.65
SMC6-204ENST00000428868 UTP14AQ9BVJ6 771 aaKnown RBP11.02□□□□□ -0.65
SMC6-204ENST00000428868 IL1RAPL2Q9NP60 686 aa11.02□□□□□ -0.65
SMC6-204ENST00000428868 NOP58Q9Y2X3 529 aaKnown RBP11.02□□□□□ -0.65
SMC6-204ENST00000428868 SH3TC1Q8TE82 1336 aa11.02□□□□□ -0.65
SMC6-204ENST00000428868 SALL3Q9BXA9 1300 aa11.02□□□□□ -0.65
SMC6-204ENST00000428868 CSF1RP07333 972 aa11.01□□□□□ -0.65
SMC6-204ENST00000428868 CTSWP56202 376 aa11.01□□□□□ -0.65
SMC6-204ENST00000428868 TTLL11Q8NHH1 800 aa11.01□□□□□ -0.65
SMC6-204ENST00000428868 RHPN1Q8TCX5 695 aa11.01□□□□□ -0.65
SMC6-204ENST00000428868 GREM2Q9H772 168 aa11.01□□□□□ -0.65
SMC6-204ENST00000428868 TFCP2L1Q9NZI6 479 aa11.01□□□□□ -0.65
SMC6-204ENST00000428868 HDAC5Q9UQL6 1122 aa11.01□□□□□ -0.65
SMC6-204ENST00000428868 CARMIL3Q8ND23 1372 aa11.01□□□□□ -0.65
SMC6-204ENST00000428868 RGL2O15211 777 aa11□□□□□ -0.65
SMC6-204ENST00000428868 PDE8AO60658 829 aa11□□□□□ -0.65
SMC6-204ENST00000428868 DDR1Q08345 913 aa11□□□□□ -0.65
SMC6-204ENST00000428868 TSHZ3Q63HK5 1081 aa11□□□□□ -0.65
SMC6-204ENST00000428868 PLEKHM2Q8IWE5 1019 aa11□□□□□ -0.65
SMC6-204ENST00000428868 PUS3Q9BZE2 481 aaKnown RBP11□□□□□ -0.65
SMC6-204ENST00000428868 LRRCC1Q9C099 1032 aa11□□□□□ -0.65
SMC6-204ENST00000428868 COPRSQ9NQ92 184 aa11□□□□□ -0.65
SMC6-204ENST00000428868 LRRC37AA6NMS7 1700 aa11□□□□□ -0.65
SMC6-204ENST00000428868 DLEC1Q9Y238 1755 aa11□□□□□ -0.65
SMC6-204ENST00000428868 BAG6P46379 1132 aa10.99□□□□□ -0.65
SMC6-204ENST00000428868 OS9Q13438 667 aaPredicted RBP10.99□□□□□ -0.65
SMC6-204ENST00000428868 LRRC24Q50LG9 513 aa10.99□□□□□ -0.65
SMC6-204ENST00000428868 ATG9AQ7Z3C6 839 aa10.99□□□□□ -0.65
SMC6-204ENST00000428868 SETDB2Q96T68 719 aa10.99□□□□□ -0.65
SMC6-204ENST00000428868 PDGFDQ9GZP0 370 aaPredicted RBP10.99□□□□□ -0.65
SMC6-204ENST00000428868 ZNF609O15014 1411 aa10.99□□□□□ -0.65
SMC6-204ENST00000428868 KIAA1551Q9HCM1 1747 aa10.98□□□□□ -0.65
SMC6-204ENST00000428868 KIF13BQ9NQT8 1826 aa10.98□□□□□ -0.65
SMC6-204ENST00000428868 RAB11FIP3O75154 756 aa10.98□□□□□ -0.65
SMC6-204ENST00000428868 GSPT1P15170 499 aaKnown RBP10.98□□□□□ -0.65
SMC6-204ENST00000428868 ITGA6P23229 1130 aa10.98□□□□□ -0.65
SMC6-204ENST00000428868 TM4SF1P30408 202 aa10.98□□□□□ -0.65
SMC6-204ENST00000428868 SLC15A2Q16348 729 aa10.98□□□□□ -0.65
SMC6-204ENST00000428868 MSL1Q68DK7 614 aa10.98□□□□□ -0.65
SMC6-204ENST00000428868 KIF1BPQ96EK5 621 aa10.98□□□□□ -0.65
SMC6-204ENST00000428868 SEC31BQ9NQW1 1179 aa10.98□□□□□ -0.65
SMC6-204ENST00000428868 TSHZ2Q9NRE2 1034 aa10.98□□□□□ -0.65
SMC6-204ENST00000428868 TLR7Q9NYK1 1049 aaKnown RBP10.98□□□□□ -0.65
SMC6-204ENST00000428868 MSH5O43196 834 aa10.97□□□□□ -0.65
SMC6-204ENST00000428868 TFCP2Q12800 502 aa10.97□□□□□ -0.65
SMC6-204ENST00000428868 G3BP1Q13283 466 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMC6-204ENST00000428868 C8orf34Q49A92 452 aa10.97□□□□□ -0.65
SMC6-204ENST00000428868 PRR5LQ6MZQ0 368 aa10.97□□□□□ -0.65
SMC6-204ENST00000428868 SLC51AQ86UW1 340 aa10.97□□□□□ -0.65
SMC6-204ENST00000428868 NBPF5PQ86XG9 351 aaPredicted RBP10.97□□□□□ -0.65
SMC6-204ENST00000428868 DOCK2Q92608 1830 aa10.96□□□□□ -0.65
SMC6-204ENST00000428868 LTBP1Q14766 1721 aa10.96□□□□□ -0.65
SMC6-204ENST00000428868 RTL9Q8NET4 1388 aa10.96□□□□□ -0.65
SMC6-204ENST00000428868 POLRMTO00411 1230 aaKnown RBP10.96□□□□□ -0.65
SMC6-204ENST00000428868 YY1P25490 414 aa10.96□□□□□ -0.65
SMC6-204ENST00000428868 PELP1Q8IZL8 1130 aaKnown RBP10.96□□□□□ -0.65
SMC6-204ENST00000428868 EAF2Q96CJ1 260 aaPredicted RBP10.96□□□□□ -0.65
SMC6-204ENST00000428868 CCDC8Q9H0W5 538 aaPredicted RBP10.96□□□□□ -0.65
SMC6-204ENST00000428868 STK32BQ9NY57 414 aa10.96□□□□□ -0.65
SMC6-204ENST00000428868 SLX4Q8IY92 1834 aa10.95□□□□□ -0.66
SMC6-204ENST00000428868 EYA2O00167 538 aa10.95□□□□□ -0.66
SMC6-204ENST00000428868 SERPINB2P05120 415 aa10.95□□□□□ -0.66
SMC6-204ENST00000428868 MX1P20591 662 aa10.95□□□□□ -0.66
SMC6-204ENST00000428868 PDE1AP54750 535 aa10.95□□□□□ -0.66
SMC6-204ENST00000428868 IFIT5Q13325 482 aaKnown RBP10.95□□□□□ -0.66
SMC6-204ENST00000428868 CCDC57Q2TAC2 916 aa10.95□□□□□ -0.66
SMC6-204ENST00000428868 HSP90AB4PQ58FF6 505 aa10.95□□□□□ -0.66
SMC6-204ENST00000428868 SLC10A5Q5PT55 438 aa10.95□□□□□ -0.66
SMC6-204ENST00000428868 TTC22Q5TAA0 569 aa10.95□□□□□ -0.66
SMC6-204ENST00000428868 NYXQ9GZU5 481 aa10.95□□□□□ -0.66
SMC6-204ENST00000428868 ZBTB47Q9UFB7 747 aaPredicted RBP10.95□□□□□ -0.66
SMC6-204ENST00000428868 BRCA1P38398 1863 aaKnown RBP10.95□□□□□ -0.66
SMC6-204ENST00000428868 ANKRD18BA2A2Z9 1011 aa10.94□□□□□ -0.66
SMC6-204ENST00000428868 GTF2E1P29083 439 aaPredicted RBP10.94□□□□□ -0.66
SMC6-204ENST00000428868 R3HDM1Q15032 1099 aaKnown RBP10.94□□□□□ -0.66
SMC6-204ENST00000428868 SF3B3Q15393 1217 aaKnown RBP10.94□□□□□ -0.66
SMC6-204ENST00000428868 TAF7LQ5H9L4 462 aa10.94□□□□□ -0.66
SMC6-204ENST00000428868 AACSQ86V21 672 aa10.94□□□□□ -0.66
SMC6-204ENST00000428868 ERC1Q8IUD2 1116 aa10.94□□□□□ -0.66
SMC6-204ENST00000428868 CNBD1Q8NA66 436 aa10.94□□□□□ -0.66
SMC6-204ENST00000428868 CHD4Q14839 1912 aa10.94□□□□□ -0.66
SMC6-204ENST00000428868 CIAO1O76071 339 aa10.93□□□□□ -0.66
SMC6-204ENST00000428868 IL15P40933 162 aaPredicted RBP10.93□□□□□ -0.66
SMC6-204ENST00000428868 CCDC152Q4G0S7 254 aa10.93□□□□□ -0.66
SMC6-204ENST00000428868 TNNI3KQ59H18 835 aa10.93□□□□□ -0.66
SMC6-204ENST00000428868 TPTE2Q6XPS3 522 aa10.93□□□□□ -0.66
SMC6-204ENST00000428868 FLAD1Q8NFF5 587 aa10.93□□□□□ -0.66
SMC6-204ENST00000428868 PI4K2BQ8TCG2 481 aa10.93□□□□□ -0.66
SMC6-204ENST00000428868 CELF1Q92879 486 aaKnown RBP10.93□□□□□ -0.66
SMC6-204ENST00000428868 BACH2Q9BYV9 841 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms