RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 KIF6Q6ZMV9 814 aa16.72■□□□□ 0.27
NCBP2-205ENST00000428425 TEX13AQ9BXU3 409 aaPredicted RBP16.72■□□□□ 0.27
NCBP2-205ENST00000428425 RBM8AQ9Y5S9 174 aaKnown RBP16.72■□□□□ 0.27
NCBP2-205ENST00000428425 NRAPQ86VF7 1730 aa16.71■□□□□ 0.27
NCBP2-205ENST00000428425 MED23Q9ULK4 1368 aa16.71■□□□□ 0.27
NCBP2-205ENST00000428425 NUTM2BA6NNL0 878 aaPredicted RBP16.71■□□□□ 0.27
NCBP2-205ENST00000428425 NUTM2EB1AL46 878 aaPredicted RBP16.71■□□□□ 0.27
NCBP2-205ENST00000428425 DTNBO60941 627 aa16.71■□□□□ 0.27
NCBP2-205ENST00000428425 CASTP20810 708 aaKnown RBP16.71■□□□□ 0.27
NCBP2-205ENST00000428425 RUFY3Q7L099 469 aa16.71■□□□□ 0.27
NCBP2-205ENST00000428425 NUTM2AQ8IVF1 878 aaPredicted RBP16.71■□□□□ 0.27
NCBP2-205ENST00000428425 DDX46Q7L014 1031 aaKnown RBP16.7■□□□□ 0.26
NCBP2-205ENST00000428425 NEUROD6Q96NK8 337 aa16.7■□□□□ 0.26
NCBP2-205ENST00000428425 SNRKQ9NRH2 765 aa16.7■□□□□ 0.26
NCBP2-205ENST00000428425 SPATA31A1Q5TZJ5 1347 aa16.7■□□□□ 0.26
NCBP2-205ENST00000428425 MAP3K15Q6ZN16 1313 aa16.7■□□□□ 0.26
NCBP2-205ENST00000428425 SLFNL1Q499Z3 407 aa16.7■□□□□ 0.26
NCBP2-205ENST00000428425 ZNF772Q68DY9 489 aaPredicted RBP16.7■□□□□ 0.26
NCBP2-205ENST00000428425 MCTP1Q6DN14 999 aa16.7■□□□□ 0.26
NCBP2-205ENST00000428425 MAP4K1Q92918 833 aa16.7■□□□□ 0.26
NCBP2-205ENST00000428425 JAKMIP1Q96N16 626 aaKnown RBP16.7■□□□□ 0.26
NCBP2-205ENST00000428425 A0A0G2JS52 829 aa16.69■□□□□ 0.26
NCBP2-205ENST00000428425 EYA2O00167 538 aa16.69■□□□□ 0.26
NCBP2-205ENST00000428425 LARGE1O95461 756 aa16.69■□□□□ 0.26
NCBP2-205ENST00000428425 POTEAQ6S8J7 498 aa16.69■□□□□ 0.26
NCBP2-205ENST00000428425 KCNB2Q92953 911 aa16.69■□□□□ 0.26
NCBP2-205ENST00000428425 ACSBG1Q96GR2 724 aa16.69■□□□□ 0.26
NCBP2-205ENST00000428425 SEC62Q99442 399 aaKnown RBP16.69■□□□□ 0.26
NCBP2-205ENST00000428425 ZNF609O15014 1411 aa16.69■□□□□ 0.26
NCBP2-205ENST00000428425 HIP1O00291 1037 aa16.69■□□□□ 0.26
NCBP2-205ENST00000428425 CREB3L3Q68CJ9 461 aa16.69■□□□□ 0.26
NCBP2-205ENST00000428425 GIGYF2Q6Y7W6 1299 aaKnown RBP16.69■□□□□ 0.26
NCBP2-205ENST00000428425 CCDC129Q6ZRS4 1044 aa16.69■□□□□ 0.26
NCBP2-205ENST00000428425 HAUS7Q99871 368 aa16.69■□□□□ 0.26
NCBP2-205ENST00000428425 IL15P40933 162 aaPredicted RBP16.68■□□□□ 0.26
NCBP2-205ENST00000428425 TRIM28Q13263 835 aaKnown RBP16.68■□□□□ 0.26
NCBP2-205ENST00000428425 PCCAP05165 728 aaPredicted RBP16.68■□□□□ 0.26
NCBP2-205ENST00000428425 IL27Q8NEV9 243 aa16.68■□□□□ 0.26
NCBP2-205ENST00000428425 INTS4Q96HW7 963 aaKnown RBP16.68■□□□□ 0.26
NCBP2-205ENST00000428425 TBC1D2BQ9UPU7 963 aa16.68■□□□□ 0.26
NCBP2-205ENST00000428425 FSD2A1L4K1 749 aa16.67■□□□□ 0.26
NCBP2-205ENST00000428425 SLC27A2O14975 620 aa16.67■□□□□ 0.26
NCBP2-205ENST00000428425 NLRP10Q86W26 655 aa16.67■□□□□ 0.26
NCBP2-205ENST00000428425 MARCH10Q8NA82 808 aaPredicted RBP16.67■□□□□ 0.26
NCBP2-205ENST00000428425 ZBTB38Q8NAP3 1195 aaPredicted RBP16.67■□□□□ 0.26
NCBP2-205ENST00000428425 KCNJ4P48050 445 aa16.66■□□□□ 0.26
NCBP2-205ENST00000428425 DDB1Q16531 1140 aa16.66■□□□□ 0.26
NCBP2-205ENST00000428425 ZSWIM6Q9HCJ5 1215 aa16.66■□□□□ 0.26
NCBP2-205ENST00000428425 A0A1B0GUL7 405 aa16.66■□□□□ 0.26
NCBP2-205ENST00000428425 TAF5LO75529 589 aa16.66■□□□□ 0.26
NCBP2-205ENST00000428425 BRD1O95696 1058 aa16.66■□□□□ 0.26
NCBP2-205ENST00000428425 GOLIM4O00461 696 aa16.65■□□□□ 0.26
NCBP2-205ENST00000428425 CCDC57Q2TAC2 916 aa16.65■□□□□ 0.26
NCBP2-205ENST00000428425 TCEANC2Q96MN5 208 aa16.65■□□□□ 0.26
NCBP2-205ENST00000428425 LMBRD1Q9NUN5 540 aa16.65■□□□□ 0.26
NCBP2-205ENST00000428425 SLIT2O94813 1529 aa16.65■□□□□ 0.26
NCBP2-205ENST00000428425 RPAP1Q9BWH6 1393 aaPredicted RBP16.65■□□□□ 0.26
NCBP2-205ENST00000428425 CIAO1O76071 339 aa16.65■□□□□ 0.26
NCBP2-205ENST00000428425 ADORA1P30542 326 aa16.65■□□□□ 0.26
NCBP2-205ENST00000428425 GPR108Q9NPR9 543 aa16.65■□□□□ 0.26
NCBP2-205ENST00000428425 PDRG1Q9NUG6 133 aa16.65■□□□□ 0.26
NCBP2-205ENST00000428425 LIMCH1Q9UPQ0 1083 aa16.65■□□□□ 0.26
NCBP2-205ENST00000428425 NUP98P52948 1817 aa16.64■□□□□ 0.25
NCBP2-205ENST00000428425 ANKRD36CQ5JPF3 1778 aa16.64■□□□□ 0.25
NCBP2-205ENST00000428425 UBN2Q6ZU65 1347 aa16.64■□□□□ 0.25
NCBP2-205ENST00000428425 CSF1RP07333 972 aa16.64■□□□□ 0.25
NCBP2-205ENST00000428425 ST3GAL1Q11201 340 aa16.64■□□□□ 0.25
NCBP2-205ENST00000428425 PLA2G12BQ9BX93 195 aa16.64■□□□□ 0.25
NCBP2-205ENST00000428425 SPATA31A5Q5VU36 1347 aa16.64■□□□□ 0.25
NCBP2-205ENST00000428425 SPATA31A7Q8IWB4 1347 aa16.64■□□□□ 0.25
NCBP2-205ENST00000428425 GOLGA6L22H0YM25 854 aa16.64■□□□□ 0.25
NCBP2-205ENST00000428425 KBTBD3Q8NAB2 608 aa16.64■□□□□ 0.25
NCBP2-205ENST00000428425 TM6SF1Q9BZW5 370 aa16.64■□□□□ 0.25
NCBP2-205ENST00000428425 GREM2Q9H772 168 aa16.64■□□□□ 0.25
NCBP2-205ENST00000428425 GOLGA6L3A6NEY3 463 aa16.63■□□□□ 0.25
NCBP2-205ENST00000428425 ZKSCAN1P17029 563 aaPredicted RBP16.63■□□□□ 0.25
NCBP2-205ENST00000428425 VPS53Q5VIR6 699 aa16.63■□□□□ 0.25
NCBP2-205ENST00000428425 GAS2L3Q86XJ1 694 aa16.63■□□□□ 0.25
NCBP2-205ENST00000428425 DZIP3Q86Y13 1208 aaKnown RBP16.63■□□□□ 0.25
NCBP2-205ENST00000428425 PAG1Q9NWQ8 432 aa16.63■□□□□ 0.25
NCBP2-205ENST00000428425 CYP46A1Q9Y6A2 500 aa16.63■□□□□ 0.25
NCBP2-205ENST00000428425 DDX49Q9Y6V7 483 aaKnown RBP16.63■□□□□ 0.25
NCBP2-205ENST00000428425 AFF2P51816 1311 aa16.63■□□□□ 0.25
NCBP2-205ENST00000428425 XRCC6P12956 609 aaKnown RBP eCLIP16.62■□□□□ 0.25
NCBP2-205ENST00000428425 FOXD4L6Q3SYB3 417 aaPredicted RBP16.62■□□□□ 0.25
NCBP2-205ENST00000428425 FOXD4L3Q6VB84 417 aaPredicted RBP16.62■□□□□ 0.25
NCBP2-205ENST00000428425 FNBP4Q8N3X1 1017 aaPredicted RBP16.62■□□□□ 0.25
NCBP2-205ENST00000428425 TTLL11Q8NHH1 800 aa16.62■□□□□ 0.25
NCBP2-205ENST00000428425 RIC1Q4ADV7 1423 aa16.62■□□□□ 0.25
NCBP2-205ENST00000428425 PRPF40AO75400 957 aaKnown RBP16.62■□□□□ 0.25
NCBP2-205ENST00000428425 ITPK1Q13572 414 aa16.62■□□□□ 0.25
NCBP2-205ENST00000428425 SKOR2Q2VWA4 1001 aaPredicted RBP16.62■□□□□ 0.25
NCBP2-205ENST00000428425 INTS5Q6P9B9 1019 aaKnown RBP16.62■□□□□ 0.25
NCBP2-205ENST00000428425 PANK2Q9BZ23 570 aa16.62■□□□□ 0.25
NCBP2-205ENST00000428425 CEP126Q9P2H0 1117 aa16.62■□□□□ 0.25
NCBP2-205ENST00000428425 IL6STP40189 918 aaPredicted RBP16.61■□□□□ 0.25
NCBP2-205ENST00000428425 IFIT5Q13325 482 aaKnown RBP16.61■□□□□ 0.25
NCBP2-205ENST00000428425 KLHL40Q2TBA0 621 aa16.61■□□□□ 0.25
NCBP2-205ENST00000428425 CCDC83Q8IWF9 413 aa16.61■□□□□ 0.25
NCBP2-205ENST00000428425 TPCN1Q9ULQ1 816 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms