RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 AOC3Q16853 763 aa22.64■■□□□ 1.21
DDR1-235ENST00000428153 MAP1SQ66K74 1059 aaPredicted RBP22.64■■□□□ 1.21
DDR1-235ENST00000428153 ZNF853P0CG23 659 aa22.63■■□□□ 1.21
DDR1-235ENST00000428153 CALD1Q05682 793 aaKnown RBP22.63■■□□□ 1.21
DDR1-235ENST00000428153 EPS15P42566 896 aa22.62■■□□□ 1.21
DDR1-235ENST00000428153 SF3B3Q15393 1217 aaKnown RBP22.62■■□□□ 1.21
DDR1-235ENST00000428153 SLC51AQ86UW1 340 aa22.62■■□□□ 1.21
DDR1-235ENST00000428153 ADARB2Q9NS39 739 aaKnown RBP22.62■■□□□ 1.21
DDR1-235ENST00000428153 LRRC37AA6NMS7 1700 aa22.61■■□□□ 1.21
DDR1-235ENST00000428153 VEGFBP49765 207 aa22.61■■□□□ 1.21
DDR1-235ENST00000428153 CXCL9Q07325 125 aa22.61■■□□□ 1.21
DDR1-235ENST00000428153 DUSP27Q5VZP5 1158 aa22.61■■□□□ 1.21
DDR1-235ENST00000428153 CHMP4AQ9BY43 222 aa22.61■■□□□ 1.21
DDR1-235ENST00000428153 IFT57Q9NWB7 429 aa22.61■■□□□ 1.21
DDR1-235ENST00000428153 GPRC5DQ9NZD1 345 aa22.61■■□□□ 1.21
DDR1-235ENST00000428153 DEFB115Q30KQ5 88 aa22.6■■□□□ 1.21
DDR1-235ENST00000428153 MBIPQ9NS73 344 aa22.6■■□□□ 1.21
DDR1-235ENST00000428153 DDX60Q8IY21 1712 aaKnown RBP22.6■■□□□ 1.21
DDR1-235ENST00000428153 GNAI1P63096 354 aa22.59■■□□□ 1.21
DDR1-235ENST00000428153 TNIP1Q15025 636 aa22.59■■□□□ 1.21
DDR1-235ENST00000428153 PRDM10Q9NQV6 1147 aa22.59■■□□□ 1.21
DDR1-235ENST00000428153 HSP90B1P14625 803 aaKnown RBP22.58■■□□□ 1.21
DDR1-235ENST00000428153 CIAPIN1Q6FI81 312 aa22.58■■□□□ 1.21
DDR1-235ENST00000428153 AIDAQ96BJ3 306 aa22.57■■□□□ 1.2
DDR1-235ENST00000428153 FAM89AQ96GI7 184 aa22.57■■□□□ 1.2
DDR1-235ENST00000428153 WBP1LQ9NX94 342 aa22.57■■□□□ 1.2
DDR1-235ENST00000428153 DUOX1Q9NRD9 1551 aa22.56■■□□□ 1.2
DDR1-235ENST00000428153 FOXN1O15353 648 aa22.56■■□□□ 1.2
DDR1-235ENST00000428153 ZC3H15Q8WU90 426 aaKnown RBP22.56■■□□□ 1.2
DDR1-235ENST00000428153 PGAP2Q9UHJ9 254 aa22.56■■□□□ 1.2
DDR1-235ENST00000428153 TRPM7Q96QT4 1865 aa22.56■■□□□ 1.2
DDR1-235ENST00000428153 APAF1O14727 1248 aa22.55■■□□□ 1.2
DDR1-235ENST00000428153 CTCFP49711 727 aaPredicted RBP22.55■■□□□ 1.2
DDR1-235ENST00000428153 GOLGA2Q08379 1002 aa22.55■■□□□ 1.2
DDR1-235ENST00000428153 ABT1Q9ULW3 272 aaKnown RBP22.55■■□□□ 1.2
DDR1-235ENST00000428153 ATP5J2-PTCD1G3V325 749 aa22.54■■□□□ 1.2
DDR1-235ENST00000428153 GMPSP49915 693 aaPredicted RBP22.54■■□□□ 1.2
DDR1-235ENST00000428153 MAP2K1Q02750 393 aaPredicted RBP22.54■■□□□ 1.2
DDR1-235ENST00000428153 ZBTB38Q8NAP3 1195 aaPredicted RBP22.54■■□□□ 1.2
DDR1-235ENST00000428153 WDR33Q9C0J8 1336 aaKnown RBP22.54■■□□□ 1.2
DDR1-235ENST00000428153 IRS4O14654 1257 aaPredicted RBP22.53■■□□□ 1.2
DDR1-235ENST00000428153 RIC3Q7Z5B4 369 aa22.53■■□□□ 1.2
DDR1-235ENST00000428153 TAF1P21675 1872 aa22.53■■□□□ 1.2
DDR1-235ENST00000428153 ECE1P42892 770 aa22.52■■□□□ 1.2
DDR1-235ENST00000428153 WASHC4Q2M389 1173 aa22.52■■□□□ 1.2
DDR1-235ENST00000428153 CCDC191Q8NCU4 936 aa22.52■■□□□ 1.2
DDR1-235ENST00000428153 DPF2Q92785 391 aa22.52■■□□□ 1.2
DDR1-235ENST00000428153 CELF1Q92879 486 aaKnown RBP22.52■■□□□ 1.2
DDR1-235ENST00000428153 BCL2L13Q9BXK5 485 aa22.52■■□□□ 1.2
DDR1-235ENST00000428153 THSD7BQ9C0I4 1608 aa22.52■■□□□ 1.2
DDR1-235ENST00000428153 RAD17O75943 681 aa22.51■■□□□ 1.19
DDR1-235ENST00000428153 NSFL1CQ9UNZ2 370 aaKnown RBP22.51■■□□□ 1.19
DDR1-235ENST00000428153 YDJCA8MPS7 323 aa22.5■■□□□ 1.19
DDR1-235ENST00000428153 RPS8P62241 208 aaKnown RBP22.5■■□□□ 1.19
DDR1-235ENST00000428153 CST9Q5W186 159 aa22.5■■□□□ 1.19
DDR1-235ENST00000428153 EYA3Q99504 573 aa22.5■■□□□ 1.19
DDR1-235ENST00000428153 TLL2Q9Y6L7 1015 aa22.5■■□□□ 1.19
DDR1-235ENST00000428153 CCDC30Q5VVM6 783 aa22.49■■□□□ 1.19
DDR1-235ENST00000428153 HHIPL1Q96JK4 782 aa22.49■■□□□ 1.19
DDR1-235ENST00000428153 PHAXQ9H814 394 aaKnown RBP22.49■■□□□ 1.19
DDR1-235ENST00000428153 PODXL2Q9NZ53 605 aa22.49■■□□□ 1.19
DDR1-235ENST00000428153 H7C1D1 291 aa22.48■■□□□ 1.19
DDR1-235ENST00000428153 DDX58O95786 925 aaKnown RBP22.48■■□□□ 1.19
DDR1-235ENST00000428153 PCCAP05165 728 aaPredicted RBP22.48■■□□□ 1.19
DDR1-235ENST00000428153 RPS12P25398 132 aaKnown RBP22.48■■□□□ 1.19
DDR1-235ENST00000428153 CAPNS2Q96L46 248 aa22.48■■□□□ 1.19
DDR1-235ENST00000428153 CNOT7Q9UIV1 285 aaKnown RBP22.48■■□□□ 1.19
DDR1-235ENST00000428153 TRAF5O00463 557 aa22.47■■□□□ 1.19
DDR1-235ENST00000428153 CCDC27Q2M243 656 aa22.47■■□□□ 1.19
DDR1-235ENST00000428153 CDC37L1Q7L3B6 337 aa22.47■■□□□ 1.19
DDR1-235ENST00000428153 POLLQ9UGP5 575 aa22.47■■□□□ 1.19
DDR1-235ENST00000428153 C6orf229H3BNL8 230 aa22.46■■□□□ 1.19
DDR1-235ENST00000428153 HIRAP54198 1017 aaPredicted RBP22.46■■□□□ 1.19
DDR1-235ENST00000428153 GPSM2P81274 684 aa22.46■■□□□ 1.19
DDR1-235ENST00000428153 FMR1Q06787 632 aaKnown RBP eCLIP22.46■■□□□ 1.193e-7■■■□□ 15.5
DDR1-235ENST00000428153 CCDC152Q4G0S7 254 aa22.46■■□□□ 1.19
DDR1-235ENST00000428153 NCBP3Q53F19 620 aaKnown RBP22.46■■□□□ 1.19
DDR1-235ENST00000428153 C8orf58Q8NAV2 365 aa22.46■■□□□ 1.19
DDR1-235ENST00000428153 METTL22Q9BUU2 404 aaPredicted RBP22.46■■□□□ 1.19
DDR1-235ENST00000428153 CWC25Q9NXE8 425 aaPredicted RBP22.46■■□□□ 1.19
DDR1-235ENST00000428153 ELL2O00472 640 aaPredicted RBP22.45■■□□□ 1.18
DDR1-235ENST00000428153 PDE8AO60658 829 aa22.45■■□□□ 1.18
DDR1-235ENST00000428153 MAP2K2P36507 400 aa22.45■■□□□ 1.18
DDR1-235ENST00000428153 RTL5Q5HYW3 569 aaPredicted RBP22.45■■□□□ 1.18
DDR1-235ENST00000428153 SAPCD2Q86UD0 394 aa22.45■■□□□ 1.18
DDR1-235ENST00000428153 TBC1D16Q8TBP0 767 aa22.45■■□□□ 1.18
DDR1-235ENST00000428153 ZNF428Q96B54 188 aa22.45■■□□□ 1.18
DDR1-235ENST00000428153 MYD88Q99836 296 aa22.45■■□□□ 1.18
DDR1-235ENST00000428153 PSMD14O00487 310 aa22.44■■□□□ 1.18
DDR1-235ENST00000428153 CAPN15O75808 1086 aa22.44■■□□□ 1.18
DDR1-235ENST00000428153 CELF2O95319 508 aaKnown RBP22.44■■□□□ 1.18
DDR1-235ENST00000428153 MICALL2Q8IY33 904 aa22.44■■□□□ 1.18
DDR1-235ENST00000428153 TRPM4Q8TD43 1214 aa22.44■■□□□ 1.18
DDR1-235ENST00000428153 GPR101Q96P66 508 aaPredicted RBP22.44■■□□□ 1.18
DDR1-235ENST00000428153 ZC3H12CQ9C0D7 883 aaKnown RBP22.44■■□□□ 1.18
DDR1-235ENST00000428153 DBNDD1Q9H9R9 158 aa22.44■■□□□ 1.18
DDR1-235ENST00000428153 COL4A1P02462 1669 aa22.43■■□□□ 1.18
DDR1-235ENST00000428153 ECE2O60344 883 aa22.43■■□□□ 1.18
DDR1-235ENST00000428153 HSPA8P11142 646 aaKnown RBP22.43■■□□□ 1.18
DDR1-235ENST00000428153 LBX1P52954 281 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms