RNA–Protein interactions for RNA: ENST00000428083.1

RHOA-IT1-201, RHOA intronic transcript 1, humanhuman

TSL 3 BASIC

Gene RHOA-IT1, Length 517 nt, Biotype sense intronic, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOA-IT1-201ENST00000428083 FZD9O00144 591 aa13.53□□□□□ -0.24
RHOA-IT1-201ENST00000428083 VEGFAP15692 232 aaPredicted RBP13.53□□□□□ -0.24
RHOA-IT1-201ENST00000428083 IARSP41252 1262 aaKnown RBP13.53□□□□□ -0.24
RHOA-IT1-201ENST00000428083 GCKRQ14397 625 aa13.53□□□□□ -0.24
RHOA-IT1-201ENST00000428083 CCDC152Q4G0S7 254 aa13.53□□□□□ -0.24
RHOA-IT1-201ENST00000428083 PTPRCP08575 1304 aa13.53□□□□□ -0.24
RHOA-IT1-201ENST00000428083 DICER1Q9UPY3 1922 aaKnown RBP13.52□□□□□ -0.24
RHOA-IT1-201ENST00000428083 RPS8P62241 208 aaKnown RBP13.52□□□□□ -0.25
RHOA-IT1-201ENST00000428083 RBM46Q8TBY0 533 aaKnown RBP13.52□□□□□ -0.25
RHOA-IT1-201ENST00000428083 L3MBTL3Q96JM7 780 aaPredicted RBP13.52□□□□□ -0.25
RHOA-IT1-201ENST00000428083 SENP3-EIF4A1A0A087X0R7 540 aa13.51□□□□□ -0.25
RHOA-IT1-201ENST00000428083 ALDH1L1O75891 902 aa13.51□□□□□ -0.25
RHOA-IT1-201ENST00000428083 BEND3Q5T5X7 828 aa13.51□□□□□ -0.25
RHOA-IT1-201ENST00000428083 MIER1Q8N108 512 aa13.51□□□□□ -0.25
RHOA-IT1-201ENST00000428083 JDP2Q8WYK2 163 aa13.51□□□□□ -0.25
RHOA-IT1-201ENST00000428083 PODXL2Q9NZ53 605 aa13.51□□□□□ -0.25
RHOA-IT1-201ENST00000428083 ZNF219Q9P2Y4 722 aaPredicted RBP13.51□□□□□ -0.25
RHOA-IT1-201ENST00000428083 CSF1RP07333 972 aa13.5□□□□□ -0.25
RHOA-IT1-201ENST00000428083 CASP7P55210 303 aa13.5□□□□□ -0.25
RHOA-IT1-201ENST00000428083 FSTL1Q12841 308 aa13.5□□□□□ -0.25
RHOA-IT1-201ENST00000428083 GPC2Q8N158 579 aa13.5□□□□□ -0.25
RHOA-IT1-201ENST00000428083 MPNDQ8N594 471 aa13.5□□□□□ -0.25
RHOA-IT1-201ENST00000428083 TTLL11Q8NHH1 800 aa13.5□□□□□ -0.25
RHOA-IT1-201ENST00000428083 LAMB2P55268 1798 aa13.5□□□□□ -0.25
RHOA-IT1-201ENST00000428083 DDX60Q8IY21 1712 aaKnown RBP13.5□□□□□ -0.25
RHOA-IT1-201ENST00000428083 IQCA1LA6NCM1 817 aa13.49□□□□□ -0.25
RHOA-IT1-201ENST00000428083 TCERG1O14776 1098 aaKnown RBP13.49□□□□□ -0.25
RHOA-IT1-201ENST00000428083 CTSWP56202 376 aa13.49□□□□□ -0.25
RHOA-IT1-201ENST00000428083 KIAA2012Q0VF49 1180 aa13.49□□□□□ -0.25
RHOA-IT1-201ENST00000428083 CWF19L2Q2TBE0 894 aaKnown RBP13.49□□□□□ -0.25
RHOA-IT1-201ENST00000428083 DPP8Q6V1X1 898 aaPredicted RBP13.49□□□□□ -0.25
RHOA-IT1-201ENST00000428083 MRPL50Q8N5N7 158 aaKnown RBP13.49□□□□□ -0.25
RHOA-IT1-201ENST00000428083 CDC5LQ99459 802 aaKnown RBP13.49□□□□□ -0.25
RHOA-IT1-201ENST00000428083 NMRK2Q9NPI5 230 aa13.49□□□□□ -0.25
RHOA-IT1-201ENST00000428083 ZNF277Q9NRM2 450 aaPredicted RBP13.49□□□□□ -0.25
RHOA-IT1-201ENST00000428083 WDR90Q96KV7 1748 aa13.48□□□□□ -0.25
RHOA-IT1-201ENST00000428083 OLFM4Q6UX06 510 aa13.48□□□□□ -0.25
RHOA-IT1-201ENST00000428083 C16orf71Q8IYS4 520 aaPredicted RBP13.48□□□□□ -0.25
RHOA-IT1-201ENST00000428083 ZNF526Q8TF50 670 aaPredicted RBP13.48□□□□□ -0.25
RHOA-IT1-201ENST00000428083 CELF1Q92879 486 aaKnown RBP13.48□□□□□ -0.25
RHOA-IT1-201ENST00000428083 UTYO14607 1347 aa13.47□□□□□ -0.25
RHOA-IT1-201ENST00000428083 POTECB2RU33 542 aa13.47□□□□□ -0.25
RHOA-IT1-201ENST00000428083 LARGE2Q8N3Y3 721 aa13.47□□□□□ -0.25
RHOA-IT1-201ENST00000428083 SSH1Q8WYL5 1049 aa13.47□□□□□ -0.25
RHOA-IT1-201ENST00000428083 ARHGAP45Q92619 1136 aa13.47□□□□□ -0.25
RHOA-IT1-201ENST00000428083 CDCA7LQ96GN5 454 aa13.47□□□□□ -0.25
RHOA-IT1-201ENST00000428083 SRCIN1Q9C0H9 1055 aa13.47□□□□□ -0.25
RHOA-IT1-201ENST00000428083 RRAGCQ9HB90 399 aa13.47□□□□□ -0.25
RHOA-IT1-201ENST00000428083 BSDC1Q9NW68 430 aaPredicted RBP13.47□□□□□ -0.25
RHOA-IT1-201ENST00000428083 LRRC37AA6NMS7 1700 aa13.47□□□□□ -0.25
RHOA-IT1-201ENST00000428083 GRM8O00222 908 aa13.46□□□□□ -0.25
RHOA-IT1-201ENST00000428083 EIF6P56537 245 aaKnown RBP13.46□□□□□ -0.25
RHOA-IT1-201ENST00000428083 RTL5Q5HYW3 569 aaPredicted RBP13.46□□□□□ -0.25
RHOA-IT1-201ENST00000428083 UBE3BQ7Z3V4 1068 aa13.46□□□□□ -0.25
RHOA-IT1-201ENST00000428083 ANKRD18AQ8IVF6 992 aa13.46□□□□□ -0.25
RHOA-IT1-201ENST00000428083 EYA3Q99504 573 aa13.46□□□□□ -0.25
RHOA-IT1-201ENST00000428083 ZNRF3Q9ULT6 936 aa13.46□□□□□ -0.25
RHOA-IT1-201ENST00000428083 TIAM2Q8IVF5 1701 aa13.45□□□□□ -0.26
RHOA-IT1-201ENST00000428083 CCDC88AQ3V6T2 1871 aa13.45□□□□□ -0.26
RHOA-IT1-201ENST00000428083 PPIP5K2O43314 1243 aa13.45□□□□□ -0.26
RHOA-IT1-201ENST00000428083 NIM1KQ8IY84 436 aa13.45□□□□□ -0.26
RHOA-IT1-201ENST00000428083 SMC1BQ8NDV3 1235 aa13.45□□□□□ -0.26
RHOA-IT1-201ENST00000428083 NSFL1CQ9UNZ2 370 aaKnown RBP13.45□□□□□ -0.26
RHOA-IT1-201ENST00000428083 CACNA1SQ13698 1873 aa13.44□□□□□ -0.26
RHOA-IT1-201ENST00000428083 DDNO94850 711 aaPredicted RBP13.44□□□□□ -0.26
RHOA-IT1-201ENST00000428083 HSPA6P17066 643 aa13.44□□□□□ -0.26
RHOA-IT1-201ENST00000428083 WASHC4Q2M389 1173 aa13.44□□□□□ -0.26
RHOA-IT1-201ENST00000428083 PNMA8AQ86V59 439 aaPredicted RBP13.44□□□□□ -0.26
RHOA-IT1-201ENST00000428083 SEC31BQ9NQW1 1179 aa13.44□□□□□ -0.26
RHOA-IT1-201ENST00000428083 XDHP47989 1333 aa13.43□□□□□ -0.26
RHOA-IT1-201ENST00000428083 F6X3S4 739 aa13.43□□□□□ -0.26
RHOA-IT1-201ENST00000428083 ATP2B4P23634 1241 aa13.43□□□□□ -0.26
RHOA-IT1-201ENST00000428083 FOXO4P98177 505 aa13.43□□□□□ -0.26
RHOA-IT1-201ENST00000428083 TNIP1Q15025 636 aa13.43□□□□□ -0.26
RHOA-IT1-201ENST00000428083 TBC1D16Q8TBP0 767 aa13.43□□□□□ -0.26
RHOA-IT1-201ENST00000428083 ANKRD2Q9GZV1 360 aa13.43□□□□□ -0.26
RHOA-IT1-201ENST00000428083 GREM2Q9H772 168 aa13.43□□□□□ -0.26
RHOA-IT1-201ENST00000428083 C9orf78Q9NZ63 289 aaPredicted RBP13.43□□□□□ -0.26
RHOA-IT1-201ENST00000428083 HDAC5Q9UQL6 1122 aa13.43□□□□□ -0.26
RHOA-IT1-201ENST00000428083 SCN4AP35499 1836 aa13.43□□□□□ -0.26
RHOA-IT1-201ENST00000428083 IGHMBP2P38935 993 aaKnown RBP13.42□□□□□ -0.26
RHOA-IT1-201ENST00000428083 RARSP54136 660 aaKnown RBP13.42□□□□□ -0.26
RHOA-IT1-201ENST00000428083 GPSM2P81274 684 aa13.42□□□□□ -0.26
RHOA-IT1-201ENST00000428083 AOC3Q16853 763 aa13.42□□□□□ -0.26
RHOA-IT1-201ENST00000428083 API5Q9BZZ5 524 aaKnown RBP13.42□□□□□ -0.26
RHOA-IT1-201ENST00000428083 ZC3H12CQ9C0D7 883 aaKnown RBP13.42□□□□□ -0.26
RHOA-IT1-201ENST00000428083 POLLQ9UGP5 575 aa13.42□□□□□ -0.26
RHOA-IT1-201ENST00000428083 HACL1Q9UJ83 578 aa13.42□□□□□ -0.26
RHOA-IT1-201ENST00000428083 LEMD3Q9Y2U8 911 aa13.42□□□□□ -0.26
RHOA-IT1-201ENST00000428083 ZBED9Q6R2W3 1325 aa13.41□□□□□ -0.26
RHOA-IT1-201ENST00000428083 ZNF541Q9H0D2 1346 aa13.41□□□□□ -0.26
RHOA-IT1-201ENST00000428083 ANKRD18BA2A2Z9 1011 aa13.41□□□□□ -0.26
RHOA-IT1-201ENST00000428083 ITGA6P23229 1130 aa13.41□□□□□ -0.26
RHOA-IT1-201ENST00000428083 MMP14P50281 582 aa13.41□□□□□ -0.26
RHOA-IT1-201ENST00000428083 CCT4P50991 539 aaKnown RBP13.41□□□□□ -0.26
RHOA-IT1-201ENST00000428083 APLP1P51693 650 aa13.41□□□□□ -0.26
RHOA-IT1-201ENST00000428083 IFIT5Q13325 482 aaKnown RBP13.41□□□□□ -0.26
RHOA-IT1-201ENST00000428083 DPF2Q92785 391 aa13.41□□□□□ -0.26
RHOA-IT1-201ENST00000428083 TAF1DQ9H5J8 278 aaPredicted RBP13.41□□□□□ -0.26
RHOA-IT1-201ENST00000428083 SMC4Q9NTJ3 1288 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms