RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 CCDC85AQ96PX6 553 aaPredicted RBP18.99■□□□□ 0.63
VARS2-203ENST00000428017 GNAI2P04899 355 aa18.98■□□□□ 0.63
VARS2-203ENST00000428017 DALRD3Q5D0E6 543 aaKnown RBP18.98■□□□□ 0.63
VARS2-203ENST00000428017 PELP1Q8IZL8 1130 aaKnown RBP18.98■□□□□ 0.63
VARS2-203ENST00000428017 TTLL6Q8N841 843 aa18.98■□□□□ 0.63
VARS2-203ENST00000428017 TTLL11Q8NHH1 800 aa18.98■□□□□ 0.63
VARS2-203ENST00000428017 WWC3Q9ULE0 1092 aa18.98■□□□□ 0.63
VARS2-203ENST00000428017 ZBTB7BO15156 539 aaPredicted RBP18.97■□□□□ 0.63
VARS2-203ENST00000428017 HOXA10P31260 410 aaPredicted RBP18.97■□□□□ 0.63
VARS2-203ENST00000428017 FOXO4P98177 505 aa18.97■□□□□ 0.63
VARS2-203ENST00000428017 LMBR1LQ6UX01 489 aa18.97■□□□□ 0.63
VARS2-203ENST00000428017 CRAMP1Q96RY5 1269 aa18.97■□□□□ 0.63
VARS2-203ENST00000428017 BICC1Q9H694 974 aaKnown RBP18.97■□□□□ 0.63
VARS2-203ENST00000428017 LRRFIP2Q9Y608 721 aaKnown RBP18.97■□□□□ 0.63
VARS2-203ENST00000428017 TNRC6CQ9HCJ0 1690 aaKnown RBP18.96■□□□□ 0.63
VARS2-203ENST00000428017 KCNA3P22001 575 aa18.96■□□□□ 0.63
VARS2-203ENST00000428017 CDC5LQ99459 802 aaKnown RBP18.96■□□□□ 0.63
VARS2-203ENST00000428017 TMX4Q9H1E5 349 aaPredicted RBP18.96■□□□□ 0.63
VARS2-203ENST00000428017 GREM2Q9H772 168 aa18.96■□□□□ 0.63
VARS2-203ENST00000428017 BCS1LQ9Y276 419 aa18.96■□□□□ 0.63
VARS2-203ENST00000428017 KIF13BQ9NQT8 1826 aa18.95■□□□□ 0.62
VARS2-203ENST00000428017 DCAF8L1A6NGE4 600 aa18.95■□□□□ 0.62
VARS2-203ENST00000428017 CSF1RP07333 972 aa18.95■□□□□ 0.62
VARS2-203ENST00000428017 CCDC57Q2TAC2 916 aa18.95■□□□□ 0.62
VARS2-203ENST00000428017 EPHA10Q5JZY3 1008 aa18.95■□□□□ 0.62
VARS2-203ENST00000428017 N4BP2Q86UW6 1770 aaPredicted RBP18.95■□□□□ 0.62
VARS2-203ENST00000428017 ANKRD18BA2A2Z9 1011 aa18.94■□□□□ 0.62
VARS2-203ENST00000428017 ITGA6P23229 1130 aa18.94■□□□□ 0.62
VARS2-203ENST00000428017 IFIT5Q13325 482 aaKnown RBP18.94■□□□□ 0.62
VARS2-203ENST00000428017 GRAPQ13588 217 aa18.94■□□□□ 0.62
VARS2-203ENST00000428017 FAM161AQ3B820 660 aa18.94■□□□□ 0.62
VARS2-203ENST00000428017 TAF7LQ5H9L4 462 aa18.94■□□□□ 0.62
VARS2-203ENST00000428017 PRPF40BQ6NWY9 871 aaKnown RBP18.94■□□□□ 0.62
VARS2-203ENST00000428017 GRAPLQ8TC17 118 aaPredicted RBP18.94■□□□□ 0.62
VARS2-203ENST00000428017 KAZALD1Q96I82 304 aa18.94■□□□□ 0.62
VARS2-203ENST00000428017 ANKRD31Q8N7Z5 1873 aa18.94■□□□□ 0.62
VARS2-203ENST00000428017 RTL9Q8NET4 1388 aa18.93■□□□□ 0.62
VARS2-203ENST00000428017 PPEF1O14829 653 aaPredicted RBP18.93■□□□□ 0.62
VARS2-203ENST00000428017 BBOX1O75936 387 aa18.93■□□□□ 0.62
VARS2-203ENST00000428017 GPR162Q16538 588 aa18.93■□□□□ 0.62
VARS2-203ENST00000428017 RABL6Q3YEC7 729 aaPredicted RBP18.93■□□□□ 0.62
VARS2-203ENST00000428017 ANKRD18AQ8IVF6 992 aa18.93■□□□□ 0.62
VARS2-203ENST00000428017 SEC31BQ9NQW1 1179 aa18.93■□□□□ 0.62
VARS2-203ENST00000428017 DDX60Q8IY21 1712 aaKnown RBP18.93■□□□□ 0.62
VARS2-203ENST00000428017 LAMB2P55268 1798 aa18.92■□□□□ 0.62
VARS2-203ENST00000428017 IGHMBP2P38935 993 aaKnown RBP18.92■□□□□ 0.62
VARS2-203ENST00000428017 RPS8P62241 208 aaKnown RBP18.92■□□□□ 0.62
VARS2-203ENST00000428017 TMC4Q7Z404 712 aa18.92■□□□□ 0.62
VARS2-203ENST00000428017 ANKRD44Q8N8A2 993 aa18.92■□□□□ 0.62
VARS2-203ENST00000428017 CRBNQ96SW2 442 aa18.92■□□□□ 0.62
VARS2-203ENST00000428017 C1orf115Q9H7X2 142 aa18.92■□□□□ 0.62
VARS2-203ENST00000428017 ZNF219Q9P2Y4 722 aaPredicted RBP18.92■□□□□ 0.62
VARS2-203ENST00000428017 CELF1Q92879 486 aaKnown RBP18.91■□□□□ 0.62
VARS2-203ENST00000428017 MPHOSPH8Q99549 860 aa18.91■□□□□ 0.62
VARS2-203ENST00000428017 ZBTB40Q9NUA8 1239 aa18.91■□□□□ 0.62
VARS2-203ENST00000428017 SOGA3Q5TF21 947 aa18.9■□□□□ 0.62
VARS2-203ENST00000428017 COL11A2P13942 1736 aaPredicted RBP18.9■□□□□ 0.62
VARS2-203ENST00000428017 SRGAP3O43295 1099 aa18.89■□□□□ 0.61
VARS2-203ENST00000428017 C21orf2O43822 256 aa18.89■□□□□ 0.61
VARS2-203ENST00000428017 KIAA1551Q9HCM1 1747 aa18.88■□□□□ 0.61
VARS2-203ENST00000428017 CC2D2BQ6DHV5 1058 aa18.88■□□□□ 0.61
VARS2-203ENST00000428017 ATP6V0A2Q9Y487 856 aa18.88■□□□□ 0.61
VARS2-203ENST00000428017 GRIN3BO60391 1043 aa18.87■□□□□ 0.61
VARS2-203ENST00000428017 IRX6P78412 446 aaPredicted RBP18.87■□□□□ 0.61
VARS2-203ENST00000428017 MTX1Q13505 466 aa18.87■□□□□ 0.61
VARS2-203ENST00000428017 CCDC93Q567U6 631 aa18.87■□□□□ 0.61
VARS2-203ENST00000428017 SP8Q8IXZ3 490 aa18.87■□□□□ 0.61
VARS2-203ENST00000428017 CNNM1Q9NRU3 951 aa18.87■□□□□ 0.61
VARS2-203ENST00000428017 GRIPAP1Q4V328 841 aa18.86■□□□□ 0.61
VARS2-203ENST00000428017 LDHAL6AQ6ZMR3 332 aa18.86■□□□□ 0.61
VARS2-203ENST00000428017 ZNF594Q96JF6 807 aaPredicted RBP18.86■□□□□ 0.61
VARS2-203ENST00000428017 BSDC1Q9NW68 430 aaPredicted RBP18.86■□□□□ 0.61
VARS2-203ENST00000428017 HMMRO75330 724 aa18.85■□□□□ 0.61
VARS2-203ENST00000428017 NEFLP07196 543 aa18.85■□□□□ 0.61
VARS2-203ENST00000428017 YBX3P16989 372 aaKnown RBP eCLIP18.85■□□□□ 0.61
VARS2-203ENST00000428017 ATP8B2P98198 1209 aa18.85■□□□□ 0.61
VARS2-203ENST00000428017 AAMPQ13685 434 aa18.85■□□□□ 0.61
VARS2-203ENST00000428017 CEP85Q6P2H3 762 aa18.85■□□□□ 0.61
VARS2-203ENST00000428017 RPAP2Q8IXW5 612 aaPredicted RBP18.85■□□□□ 0.61
VARS2-203ENST00000428017 RTKN2Q8IZC4 609 aa18.85■□□□□ 0.61
VARS2-203ENST00000428017 DLEC1Q9Y238 1755 aa18.85■□□□□ 0.61
VARS2-203ENST00000428017 ARHGAP27Q6ZUM4 889 aa18.84■□□□□ 0.61
VARS2-203ENST00000428017 EXOC6Q8TAG9 804 aa18.84■□□□□ 0.61
VARS2-203ENST00000428017 C7orf43Q8WVR3 580 aa18.84■□□□□ 0.61
VARS2-203ENST00000428017 PNMA6EA0A0J9YXQ4 647 aa18.83■□□□□ 0.6
VARS2-203ENST00000428017 OLFM4Q6UX06 510 aa18.83■□□□□ 0.6
VARS2-203ENST00000428017 KLHDC4Q8TBB5 520 aa18.83■□□□□ 0.6
VARS2-203ENST00000428017 ANKIB1Q9P2G1 1089 aa18.83■□□□□ 0.6
VARS2-203ENST00000428017 NSFL1CQ9UNZ2 370 aaKnown RBP18.83■□□□□ 0.6
VARS2-203ENST00000428017 MYH3P11055 1940 aa18.82■□□□□ 0.6
VARS2-203ENST00000428017 RFX5P48382 616 aaPredicted RBP18.82■□□□□ 0.6
VARS2-203ENST00000428017 DPP8Q6V1X1 898 aaPredicted RBP18.82■□□□□ 0.6
VARS2-203ENST00000428017 MPNDQ8N594 471 aa18.82■□□□□ 0.6
VARS2-203ENST00000428017 ANKRD2Q9GZV1 360 aa18.82■□□□□ 0.6
VARS2-203ENST00000428017 SIL1Q9H173 461 aa18.82■□□□□ 0.6
VARS2-203ENST00000428017 SRCAPQ6ZRS2 3230 aa18.82■□□□□ 0.6
VARS2-203ENST00000428017 PTPN12Q05209 780 aaKnown RBP18.81■□□□□ 0.6
VARS2-203ENST00000428017 SSH3Q8TE77 659 aa18.81■□□□□ 0.6
VARS2-203ENST00000428017 COPRSQ9NQ92 184 aa18.81■□□□□ 0.6
VARS2-203ENST00000428017 FBXO3Q9UK99 471 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms