RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 CRY2Q49AN0 593 aa11.89□□□□□ -0.51
RFX3-AS1-202ENST00000427722 SOGA3Q5TF21 947 aa11.89□□□□□ -0.51
RFX3-AS1-202ENST00000427722 ANKRD13DQ6ZTN6 518 aa11.89□□□□□ -0.51
RFX3-AS1-202ENST00000427722 C3orf67Q6ZVT6 689 aa11.89□□□□□ -0.51
RFX3-AS1-202ENST00000427722 TAOK3Q9H2K8 898 aa11.89□□□□□ -0.51
RFX3-AS1-202ENST00000427722 OCEL1Q9H607 264 aa11.89□□□□□ -0.51
RFX3-AS1-202ENST00000427722 TNRC6CQ9HCJ0 1690 aaKnown RBP11.89□□□□□ -0.51
RFX3-AS1-202ENST00000427722 DLEC1Q9Y238 1755 aa11.89□□□□□ -0.51
RFX3-AS1-202ENST00000427722 ATP5J2-PTCD1G3V325 749 aa11.88□□□□□ -0.51
RFX3-AS1-202ENST00000427722 TCERG1O14776 1098 aaKnown RBP11.88□□□□□ -0.51
RFX3-AS1-202ENST00000427722 CCDC93Q567U6 631 aa11.88□□□□□ -0.51
RFX3-AS1-202ENST00000427722 CCDC30Q5VVM6 783 aa11.88□□□□□ -0.51
RFX3-AS1-202ENST00000427722 PHAXQ9H814 394 aaKnown RBP11.88□□□□□ -0.51
RFX3-AS1-202ENST00000427722 TRMT112Q9UI30 125 aaKnown RBP11.88□□□□□ -0.51
RFX3-AS1-202ENST00000427722 ARFGEF1Q9Y6D6 1849 aa11.88□□□□□ -0.51
RFX3-AS1-202ENST00000427722 RNF123Q5XPI4 1314 aa11.87□□□□□ -0.51
RFX3-AS1-202ENST00000427722 C1QTNF8P60827 252 aa11.87□□□□□ -0.51
RFX3-AS1-202ENST00000427722 TWISTNBQ3B726 338 aaPredicted RBP11.87□□□□□ -0.51
RFX3-AS1-202ENST00000427722 OLFM4Q6UX06 510 aa11.87□□□□□ -0.51
RFX3-AS1-202ENST00000427722 RIC3Q7Z5B4 369 aa11.87□□□□□ -0.51
RFX3-AS1-202ENST00000427722 WDR63Q8IWG1 891 aa11.87□□□□□ -0.51
RFX3-AS1-202ENST00000427722 NMRK2Q9NPI5 230 aa11.87□□□□□ -0.51
RFX3-AS1-202ENST00000427722 SH3TC1Q8TE82 1336 aa11.86□□□□□ -0.51
RFX3-AS1-202ENST00000427722 HCLS1P14317 486 aaPredicted RBP11.86□□□□□ -0.51
RFX3-AS1-202ENST00000427722 ALDH1B1P30837 517 aa11.86□□□□□ -0.51
RFX3-AS1-202ENST00000427722 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
RFX3-AS1-202ENST00000427722 SYNE4Q8N205 404 aa11.86□□□□□ -0.51
RFX3-AS1-202ENST00000427722 C7orf43Q8WVR3 580 aa11.86□□□□□ -0.51
RFX3-AS1-202ENST00000427722 NLRP3Q96P20 1036 aa11.86□□□□□ -0.51
RFX3-AS1-202ENST00000427722 ISCA1Q9BUE6 129 aa11.86□□□□□ -0.51
RFX3-AS1-202ENST00000427722 STK31Q9BXU1 1019 aa11.86□□□□□ -0.51
RFX3-AS1-202ENST00000427722 CHMP4AQ9BY43 222 aa11.86□□□□□ -0.51
RFX3-AS1-202ENST00000427722 SCUBE2Q9NQ36 999 aa11.86□□□□□ -0.51
RFX3-AS1-202ENST00000427722 KDM2BQ8NHM5 1336 aa11.86□□□□□ -0.51
RFX3-AS1-202ENST00000427722 LTBP3Q9NS15 1303 aa11.86□□□□□ -0.51
RFX3-AS1-202ENST00000427722 ZC3H4Q9UPT8 1303 aaKnown RBP11.86□□□□□ -0.51
RFX3-AS1-202ENST00000427722 KIF3CO14782 793 aa11.85□□□□□ -0.51
RFX3-AS1-202ENST00000427722 DDX58O95786 925 aaKnown RBP11.85□□□□□ -0.51
RFX3-AS1-202ENST00000427722 HOXA10P31260 410 aaPredicted RBP11.85□□□□□ -0.51
RFX3-AS1-202ENST00000427722 SLC51AQ86UW1 340 aa11.85□□□□□ -0.51
RFX3-AS1-202ENST00000427722 RBM17Q96I25 401 aaKnown RBP11.85□□□□□ -0.51
RFX3-AS1-202ENST00000427722 PPEF1O14829 653 aaPredicted RBP11.84□□□□□ -0.51
RFX3-AS1-202ENST00000427722 FKBP4Q02790 459 aaKnown RBP eCLIP11.84□□□□□ -0.51
RFX3-AS1-202ENST00000427722 EXOSC9Q06265 439 aaKnown RBP11.84□□□□□ -0.51
RFX3-AS1-202ENST00000427722 RTL5Q5HYW3 569 aaPredicted RBP11.84□□□□□ -0.51
RFX3-AS1-202ENST00000427722 SLC10A5Q5PT55 438 aa11.84□□□□□ -0.51
RFX3-AS1-202ENST00000427722 CRAMP1Q96RY5 1269 aa11.84□□□□□ -0.51
RFX3-AS1-202ENST00000427722 MYD88Q99836 296 aa11.84□□□□□ -0.51
RFX3-AS1-202ENST00000427722 MYH16Q9H6N6 1097 aa11.84□□□□□ -0.51
RFX3-AS1-202ENST00000427722 ZNF277Q9NRM2 450 aaPredicted RBP11.84□□□□□ -0.51
RFX3-AS1-202ENST00000427722 ABCC4O15439 1325 aa11.84□□□□□ -0.51
RFX3-AS1-202ENST00000427722 RTKN2Q8IZC4 609 aa11.83□□□□□ -0.52
RFX3-AS1-202ENST00000427722 FAM89AQ96GI7 184 aa11.83□□□□□ -0.52
RFX3-AS1-202ENST00000427722 MAP3K2Q9Y2U5 619 aa11.83□□□□□ -0.52
RFX3-AS1-202ENST00000427722 NUP98P52948 1817 aa11.83□□□□□ -0.52
RFX3-AS1-202ENST00000427722 SLX4Q8IY92 1834 aa11.82□□□□□ -0.52
RFX3-AS1-202ENST00000427722 IRS4O14654 1257 aaPredicted RBP11.82□□□□□ -0.52
RFX3-AS1-202ENST00000427722 RIOK3O14730 519 aaKnown RBP11.82□□□□□ -0.52
RFX3-AS1-202ENST00000427722 G2E3Q7L622 706 aa11.82□□□□□ -0.52
RFX3-AS1-202ENST00000427722 RNF25Q96BH1 459 aaPredicted RBP11.82□□□□□ -0.52
RFX3-AS1-202ENST00000427722 METTL22Q9BUU2 404 aaPredicted RBP11.82□□□□□ -0.52
RFX3-AS1-202ENST00000427722 ZNF521Q96K83 1311 aa11.82□□□□□ -0.52
RFX3-AS1-202ENST00000427722 SNED1Q8TER0 1413 aa11.81□□□□□ -0.52
RFX3-AS1-202ENST00000427722 PI4KAP2A4QPH2 592 aa11.81□□□□□ -0.52
RFX3-AS1-202ENST00000427722 GLTPD2A6NH11 291 aa11.81□□□□□ -0.52
RFX3-AS1-202ENST00000427722 CCER2I3L3R5 266 aa11.81□□□□□ -0.52
RFX3-AS1-202ENST00000427722 FLIIQ13045 1269 aa11.81□□□□□ -0.52
RFX3-AS1-202ENST00000427722 TRIM28Q13263 835 aaKnown RBP11.81□□□□□ -0.52
RFX3-AS1-202ENST00000427722 CC2D2BQ6DHV5 1058 aa11.81□□□□□ -0.52
RFX3-AS1-202ENST00000427722 DDX46Q7L014 1031 aaKnown RBP11.81□□□□□ -0.52
RFX3-AS1-202ENST00000427722 PI4KAP1Q8N8J0 262 aa11.81□□□□□ -0.52
RFX3-AS1-202ENST00000427722 ZBTB38Q8NAP3 1195 aaPredicted RBP11.81□□□□□ -0.52
RFX3-AS1-202ENST00000427722 CWC25Q9NXE8 425 aaPredicted RBP11.81□□□□□ -0.52
RFX3-AS1-202ENST00000427722 VAMP4O75379 141 aa11.8□□□□□ -0.52
RFX3-AS1-202ENST00000427722 IARSP41252 1262 aaKnown RBP11.8□□□□□ -0.52
RFX3-AS1-202ENST00000427722 NEXNQ0ZGT2 675 aa11.8□□□□□ -0.52
RFX3-AS1-202ENST00000427722 FKBP5Q13451 457 aaPredicted RBP11.8□□□□□ -0.52
RFX3-AS1-202ENST00000427722 GRAPQ13588 217 aa11.8□□□□□ -0.52
RFX3-AS1-202ENST00000427722 KSR2Q6VAB6 950 aa11.8□□□□□ -0.52
RFX3-AS1-202ENST00000427722 C16orf71Q8IYS4 520 aaPredicted RBP11.8□□□□□ -0.52
RFX3-AS1-202ENST00000427722 CCDC191Q8NCU4 936 aa11.8□□□□□ -0.52
RFX3-AS1-202ENST00000427722 GRAPLQ8TC17 118 aaPredicted RBP11.8□□□□□ -0.52
RFX3-AS1-202ENST00000427722 JARID2Q92833 1246 aaPredicted RBP11.8□□□□□ -0.52
RFX3-AS1-202ENST00000427722 PSMD1Q99460 953 aa11.8□□□□□ -0.52
RFX3-AS1-202ENST00000427722 TMX4Q9H1E5 349 aaPredicted RBP11.8□□□□□ -0.52
RFX3-AS1-202ENST00000427722 RRAGCQ9HB90 399 aa11.8□□□□□ -0.52
RFX3-AS1-202ENST00000427722 ATP6V0A2Q9Y487 856 aa11.8□□□□□ -0.52
RFX3-AS1-202ENST00000427722 ANKRD36CQ5JPF3 1778 aa11.79□□□□□ -0.52
RFX3-AS1-202ENST00000427722 ARFGEF2Q9Y6D5 1785 aa11.79□□□□□ -0.52
RFX3-AS1-202ENST00000427722 DPY19L2Q6NUT2 758 aa11.79□□□□□ -0.52
RFX3-AS1-202ENST00000427722 TIAM2Q8IVF5 1701 aa11.79□□□□□ -0.52
RFX3-AS1-202ENST00000427722 ZNF541Q9H0D2 1346 aa11.79□□□□□ -0.52
RFX3-AS1-202ENST00000427722 TOMM70O94826 608 aa11.78□□□□□ -0.52
RFX3-AS1-202ENST00000427722 PCCAP05165 728 aaPredicted RBP11.78□□□□□ -0.52
RFX3-AS1-202ENST00000427722 IGKV5-2P06315 115 aa11.78□□□□□ -0.52
RFX3-AS1-202ENST00000427722 SF3B3Q15393 1217 aaKnown RBP11.78□□□□□ -0.52
RFX3-AS1-202ENST00000427722 CWF19L2Q2TBE0 894 aaKnown RBP11.78□□□□□ -0.52
RFX3-AS1-202ENST00000427722 NEURL1BA8MQ27 555 aa11.77□□□□□ -0.53
RFX3-AS1-202ENST00000427722 E9PSI1 815 aa11.77□□□□□ -0.53
RFX3-AS1-202ENST00000427722 BBOX1O75936 387 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms