RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 CD109Q6YHK3 1445 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 FAM135AQ9P2D6 1515 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 FSD2A1L4K1 749 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 FOXO3O43524 673 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 SIRT1Q96EB6 747 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 G3BP2Q9UN86 482 aaKnown RBP6.56□□□□□ -1.36
HERC4-206ENST00000427635 CREB3O43889 395 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 SLC4A8Q2Y0W8 1093 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 TRAPPC3LQ5T215 181 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 EXOC6Q8TAG9 804 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 C6orf50Q9HD87 102 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 WIZO95785 1651 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 USO1O60763 962 aaKnown RBP6.56□□□□□ -1.36
HERC4-206ENST00000427635 IFFO1Q0D2I5 559 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 PDE3AQ14432 1141 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 ATP2B3Q16720 1220 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 MYCBPQ99417 103 aaPredicted RBP6.56□□□□□ -1.36
HERC4-206ENST00000427635 WDR33Q9C0J8 1336 aaKnown RBP6.56□□□□□ -1.36
HERC4-206ENST00000427635 MPNDQ8N594 471 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 CEP83Q9Y592 693 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 NPHP3Q7Z494 1330 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 H0YIN7 160 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 RIMBP2O15034 1052 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 TPTE2Q6XPS3 522 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 LUZP1Q86V48 1076 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 PANK1Q8TE04 598 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 MMRN2Q9H8L6 949 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 FAM13AO94988 1023 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 TCP11L2Q8N4U5 519 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 USHBP1Q8N6Y0 703 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 KIAA1524Q8TCG1 905 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 RNF34Q969K3 372 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 KIF1BPQ96EK5 621 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 MTA3Q9BTC8 594 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 ZNF500O60304 480 aaPredicted RBP6.55□□□□□ -1.36
HERC4-206ENST00000427635 PDE4AP27815 886 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 IFI16Q16666 785 aaKnown RBP6.55□□□□□ -1.36
HERC4-206ENST00000427635 TDRD12Q587J7 1177 aaKnown RBP6.55□□□□□ -1.36
HERC4-206ENST00000427635 ELMSAN1Q6PJG2 1045 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 CCDC61Q9Y6R9 512 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 WDR7Q9Y4E6 1490 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 BCAR3O75815 825 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 MFSD6Q6ZSS7 791 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 HS6ST3Q8IZP7 471 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 PLVAPQ9BX97 442 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 TRIM6Q9C030 488 aaPredicted RBP6.55□□□□□ -1.36
HERC4-206ENST00000427635 CALM1P0DP23 149 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 CALM2P0DP24 149 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 CALM3P0DP25 149 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 LDHAL6AQ6ZMR3 332 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 LRRC59Q96AG4 307 aaKnown RBP6.55□□□□□ -1.36
HERC4-206ENST00000427635 CDCA7Q9BWT1 371 aaPredicted RBP6.55□□□□□ -1.36
HERC4-206ENST00000427635 ZBTB3Q9H5J0 574 aa6.55□□□□□ -1.36
HERC4-206ENST00000427635 GOLGA6CA6NDK9 693 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 GOLGA6BA6NDN3 693 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 SPDYE3A6NKU9 549 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 C11orf95C9JLR9 678 aaPredicted RBP6.54□□□□□ -1.36
HERC4-206ENST00000427635 H7C1D1 291 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 GOLGA6DP0CG33 693 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 XRCC6P12956 609 aaKnown RBP eCLIP6.54□□□□□ -1.36
HERC4-206ENST00000427635 CASTP20810 708 aaKnown RBP6.54□□□□□ -1.36
HERC4-206ENST00000427635 MTIF2P46199 727 aaKnown RBP6.54□□□□□ -1.36
HERC4-206ENST00000427635 MRRFQ96E11 262 aaKnown RBP6.54□□□□□ -1.36
HERC4-206ENST00000427635 UPF3BQ9BZI7 483 aaKnown RBP6.54□□□□□ -1.36
HERC4-206ENST00000427635 ANKRD2Q9GZV1 360 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 GOLGA6AQ9NYA3 693 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 STK25O00506 426 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 GLRX3O76003 335 aaKnown RBP6.54□□□□□ -1.36
HERC4-206ENST00000427635 GABPAQ06546 454 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 CUL4BQ13620 913 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 GSDMBQ8TAX9 411 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 HFM1A2PYH4 1435 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 NOP56O00567 594 aaKnown RBP6.54□□□□□ -1.36
HERC4-206ENST00000427635 BACH1O14867 736 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 PAX3P23760 479 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 ARHGAP29Q52LW3 1261 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 CFAP58Q5T655 872 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 CDAN1Q8IWY9 1227 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 PRPF38AQ8NAV1 312 aaKnown RBP6.54□□□□□ -1.36
HERC4-206ENST00000427635 PROCA1Q8NCQ7 364 aaPredicted RBP6.54□□□□□ -1.36
HERC4-206ENST00000427635 CCT6BQ92526 530 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 ZRANB1Q9UGI0 708 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 CD2APQ9Y5K6 639 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 MCM3P25205 808 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 IRF5Q13568 498 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 SMYD5Q6GMV2 418 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 NIM1KQ8IY84 436 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 NIP7Q9Y221 180 aaKnown RBP eCLIP6.54□□□□□ -1.36
HERC4-206ENST00000427635 TMEM67Q5HYA8 995 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 NUTM1Q86Y26 1132 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 CCDC89Q8N998 374 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 ANKRD24Q8TF21 1146 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 SMARCA4P51532 1647 aa6.54□□□□□ -1.36
HERC4-206ENST00000427635 TEX14Q8IWB6 1497 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 FCHSD2O94868 740 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 RPAINQ86UA6 219 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 EXOC1Q9NV70 894 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 GNAQP50148 359 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 HSPA2P54652 639 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 ARHGAP27Q6ZUM4 889 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 453 ms