RNA–Protein interactions for RNA: ENST00000427415.1

SDHAP1-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4 BASIC

Gene SDHAP1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-204ENST00000427415 GRM8O00222 908 aa28.6■■■□□ 2.17
SDHAP1-204ENST00000427415 PPEF1O14829 653 aaPredicted RBP28.6■■■□□ 2.17
SDHAP1-204ENST00000427415 CTSWP56202 376 aa28.6■■■□□ 2.17
SDHAP1-204ENST00000427415 GRAPQ13588 217 aa28.6■■■□□ 2.17
SDHAP1-204ENST00000427415 GRAPLQ8TC17 118 aaPredicted RBP28.6■■■□□ 2.17
SDHAP1-204ENST00000427415 YTHDC1Q96MU7 727 aaKnown RBP28.6■■■□□ 2.17
SDHAP1-204ENST00000427415 CASP7P55210 303 aa28.59■■■□□ 2.17
SDHAP1-204ENST00000427415 PLA2G12BQ9BX93 195 aa28.59■■■□□ 2.17
SDHAP1-204ENST00000427415 BBOX1O75936 387 aa28.58■■■□□ 2.17
SDHAP1-204ENST00000427415 CCT4P50991 539 aaKnown RBP28.58■■■□□ 2.17
SDHAP1-204ENST00000427415 CC2D2BQ6DHV5 1058 aa28.58■■■□□ 2.17
SDHAP1-204ENST00000427415 FRAT1Q92837 279 aaPredicted RBP28.58■■■□□ 2.17
SDHAP1-204ENST00000427415 TMX4Q9H1E5 349 aaPredicted RBP28.58■■■□□ 2.17
SDHAP1-204ENST00000427415 YY1P25490 414 aa28.57■■■□□ 2.16
SDHAP1-204ENST00000427415 TMC4Q7Z404 712 aa28.56■■■□□ 2.16
SDHAP1-204ENST00000427415 RTKN2Q8IZC4 609 aa28.56■■■□□ 2.16
SDHAP1-204ENST00000427415 DICER1Q9UPY3 1922 aaKnown RBP28.55■■■□□ 2.16
SDHAP1-204ENST00000427415 LRRC37AA6NMS7 1700 aa28.55■■■□□ 2.16
SDHAP1-204ENST00000427415 LTBP3Q9NS15 1303 aa28.55■■■□□ 2.16
SDHAP1-204ENST00000427415 NFKBIEO00221 500 aa28.55■■■□□ 2.16
SDHAP1-204ENST00000427415 RASSF7Q02833 373 aa28.55■■■□□ 2.16
SDHAP1-204ENST00000427415 GRIPAP1Q4V328 841 aa28.55■■■□□ 2.16
SDHAP1-204ENST00000427415 ATF7IPQ6VMQ6 1270 aa28.55■■■□□ 2.16
SDHAP1-204ENST00000427415 TAOK3Q9H2K8 898 aa28.55■■■□□ 2.16
SDHAP1-204ENST00000427415 RTL9Q8NET4 1388 aa28.54■■■□□ 2.16
SDHAP1-204ENST00000427415 ZKSCAN2Q63HK3 967 aa28.54■■■□□ 2.16
SDHAP1-204ENST00000427415 TTLL11Q8NHH1 800 aa28.54■■■□□ 2.16
SDHAP1-204ENST00000427415 SPEF2Q9C093 1822 aa28.53■■■□□ 2.16
SDHAP1-204ENST00000427415 UTYO14607 1347 aa28.53■■■□□ 2.16
SDHAP1-204ENST00000427415 CCDC85AQ96PX6 553 aaPredicted RBP28.53■■■□□ 2.16
SDHAP1-204ENST00000427415 ATP6V0A2Q9Y487 856 aa28.53■■■□□ 2.16
SDHAP1-204ENST00000427415 OLFM4Q6UX06 510 aa28.52■■■□□ 2.16
SDHAP1-204ENST00000427415 TRIM27P14373 513 aa28.51■■■□□ 2.15
SDHAP1-204ENST00000427415 LMNB1P20700 586 aa28.51■■■□□ 2.15
SDHAP1-204ENST00000427415 FKBP4Q02790 459 aaKnown RBP eCLIP28.51■■■□□ 2.15
SDHAP1-204ENST00000427415 CELF1Q92879 486 aaKnown RBP28.51■■■□□ 2.15
SDHAP1-204ENST00000427415 CDC5LQ99459 802 aaKnown RBP28.51■■■□□ 2.15
SDHAP1-204ENST00000427415 SEC31BQ9NQW1 1179 aa28.51■■■□□ 2.15
SDHAP1-204ENST00000427415 SNED1Q8TER0 1413 aa28.51■■■□□ 2.15
SDHAP1-204ENST00000427415 TIAM2Q8IVF5 1701 aa28.5■■■□□ 2.15
SDHAP1-204ENST00000427415 RPS8P62241 208 aaKnown RBP28.5■■■□□ 2.15
SDHAP1-204ENST00000427415 C9orf131Q5VYM1 1079 aa28.5■■■□□ 2.15
SDHAP1-204ENST00000427415 SP8Q8IXZ3 490 aa28.5■■■□□ 2.15
SDHAP1-204ENST00000427415 RNF181Q9P0P0 153 aa28.5■■■□□ 2.15
SDHAP1-204ENST00000427415 COL4A1P02462 1669 aa28.5■■■□□ 2.15
SDHAP1-204ENST00000427415 CSF1RP07333 972 aa28.49■■■□□ 2.15
SDHAP1-204ENST00000427415 NBPF7P0C2Y1 421 aaPredicted RBP28.49■■■□□ 2.15
SDHAP1-204ENST00000427415 ANKRD18AQ8IVF6 992 aa28.49■■■□□ 2.15
SDHAP1-204ENST00000427415 GREM2Q9H772 168 aa28.49■■■□□ 2.15
SDHAP1-204ENST00000427415 RCAN3Q9UKA8 241 aa28.49■■■□□ 2.15
SDHAP1-204ENST00000427415 INTS3Q68E01 1043 aaKnown RBP28.48■■■□□ 2.15
SDHAP1-204ENST00000427415 PSMD1Q99460 953 aa28.48■■■□□ 2.15
SDHAP1-204ENST00000427415 FOXO4P98177 505 aa28.47■■■□□ 2.15
SDHAP1-204ENST00000427415 FAM161AQ3B820 660 aa28.47■■■□□ 2.15
SDHAP1-204ENST00000427415 SUCLG2Q96I99 432 aa28.47■■■□□ 2.15
SDHAP1-204ENST00000427415 USP44Q9H0E7 712 aa28.47■■■□□ 2.15
SDHAP1-204ENST00000427415 FTSJ3Q8IY81 847 aaKnown RBP28.46■■■□□ 2.15
SDHAP1-204ENST00000427415 CHMP3Q9Y3E7 222 aa28.46■■■□□ 2.15
SDHAP1-204ENST00000427415 ITGA6P23229 1130 aa28.45■■■□□ 2.14
SDHAP1-204ENST00000427415 LMBR1LQ6UX01 489 aa28.45■■■□□ 2.14
SDHAP1-204ENST00000427415 CLUAP1Q96AJ1 413 aa28.45■■■□□ 2.14
SDHAP1-204ENST00000427415 ZC3H4Q9UPT8 1303 aaKnown RBP28.44■■■□□ 2.14
SDHAP1-204ENST00000427415 UBTFL1P0CB47 393 aaPredicted RBP28.44■■■□□ 2.14
SDHAP1-204ENST00000427415 DPP8Q6V1X1 898 aaPredicted RBP28.44■■■□□ 2.14
SDHAP1-204ENST00000427415 HDAC5Q9UQL6 1122 aa28.44■■■□□ 2.14
SDHAP1-204ENST00000427415 ANKRD18BA2A2Z9 1011 aa28.43■■■□□ 2.14
SDHAP1-204ENST00000427415 IGHMBP2P38935 993 aaKnown RBP28.43■■■□□ 2.14
SDHAP1-204ENST00000427415 PRELPP51888 382 aa28.43■■■□□ 2.14
SDHAP1-204ENST00000427415 IFIT5Q13325 482 aaKnown RBP28.43■■■□□ 2.14
SDHAP1-204ENST00000427415 EPHA10Q5JZY3 1008 aa28.43■■■□□ 2.14
SDHAP1-204ENST00000427415 SLC51AQ86UW1 340 aa28.43■■■□□ 2.14
SDHAP1-204ENST00000427415 MPNDQ8N594 471 aa28.43■■■□□ 2.14
SDHAP1-204ENST00000427415 SUPT20HQ8NEM7 779 aa28.43■■■□□ 2.14
SDHAP1-204ENST00000427415 TNNQ9UQP3 1299 aa28.43■■■□□ 2.14
SDHAP1-204ENST00000427415 DZIP1LQ8IYY4 767 aaKnown RBP28.42■■■□□ 2.14
SDHAP1-204ENST00000427415 ZNF277Q9NRM2 450 aaPredicted RBP28.42■■■□□ 2.14
SDHAP1-204ENST00000427415 LTBP1Q14766 1721 aa28.42■■■□□ 2.14
SDHAP1-204ENST00000427415 CCDC57Q2TAC2 916 aa28.41■■■□□ 2.14
SDHAP1-204ENST00000427415 KAZALD1Q96I82 304 aa28.41■■■□□ 2.14
SDHAP1-204ENST00000427415 BICC1Q9H694 974 aaKnown RBP28.41■■■□□ 2.14
SDHAP1-204ENST00000427415 IARSP41252 1262 aaKnown RBP28.4■■■□□ 2.14
SDHAP1-204ENST00000427415 BSDC1Q9NW68 430 aaPredicted RBP28.4■■■□□ 2.14
SDHAP1-204ENST00000427415 GNAI3P08754 354 aa28.39■■■□□ 2.14
SDHAP1-204ENST00000427415 MS4A1P11836 297 aa28.39■■■□□ 2.14
SDHAP1-204ENST00000427415 RABL6Q3YEC7 729 aaPredicted RBP28.39■■■□□ 2.14
SDHAP1-204ENST00000427415 TMEM57Q8N5G2 664 aa28.39■■■□□ 2.14
SDHAP1-204ENST00000427415 MPHOSPH8Q99549 860 aa28.39■■■□□ 2.14
SDHAP1-204ENST00000427415 RTFDC1Q9BY42 306 aaPredicted RBP28.39■■■□□ 2.14
SDHAP1-204ENST00000427415 DUOX1Q9NRD9 1551 aa28.39■■■□□ 2.14
SDHAP1-204ENST00000427415 TAF7LQ5H9L4 462 aa28.38■■■□□ 2.13
SDHAP1-204ENST00000427415 MEIS3Q99687 375 aa28.38■■■□□ 2.13
SDHAP1-204ENST00000427415 NSFL1CQ9UNZ2 370 aaKnown RBP28.38■■■□□ 2.13
SDHAP1-204ENST00000427415 ANKRD44Q8N8A2 993 aa28.37■■■□□ 2.13
SDHAP1-204ENST00000427415 VPS33BQ9H267 617 aa28.37■■■□□ 2.13
SDHAP1-204ENST00000427415 GPSM2P81274 684 aa28.36■■■□□ 2.13
SDHAP1-204ENST00000427415 PODXL2Q9NZ53 605 aa28.36■■■□□ 2.13
SDHAP1-204ENST00000427415 ANKIB1Q9P2G1 1089 aa28.36■■■□□ 2.13
SDHAP1-204ENST00000427415 ITPRIPQ8IWB1 547 aa28.35■■■□□ 2.13
SDHAP1-204ENST00000427415 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.35■■■□□ 2.13
SDHAP1-204ENST00000427415 ZNF784Q8NCA9 323 aaPredicted RBP28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms