RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 SNRKQ9NRH2 765 aa10.36□□□□□ -0.75
SH3D19-204ENST00000427414 ZBTB1Q9Y2K1 713 aa10.36□□□□□ -0.75
SH3D19-204ENST00000427414 DDX11L8A8MPP1 907 aa10.36□□□□□ -0.75
SH3D19-204ENST00000427414 FAM196AQ6ZSG2 479 aa10.36□□□□□ -0.75
SH3D19-204ENST00000427414 MYH14Q7Z406 1995 aaKnown RBP10.36□□□□□ -0.75
SH3D19-204ENST00000427414 SASH1O94885 1247 aa10.35□□□□□ -0.75
SH3D19-204ENST00000427414 IFIT2P09913 472 aaKnown RBP10.35□□□□□ -0.75
SH3D19-204ENST00000427414 ANAPC15P60006 121 aa10.35□□□□□ -0.75
SH3D19-204ENST00000427414 OS9Q13438 667 aaPredicted RBP10.35□□□□□ -0.75
SH3D19-204ENST00000427414 SLC27A3Q5K4L6 730 aa10.35□□□□□ -0.75
SH3D19-204ENST00000427414 C16orf71Q8IYS4 520 aaPredicted RBP10.35□□□□□ -0.75
SH3D19-204ENST00000427414 RAD50Q92878 1312 aa10.35□□□□□ -0.75
SH3D19-204ENST00000427414 C4BP0C0L5 1744 aa10.35□□□□□ -0.75
SH3D19-204ENST00000427414 DDX60Q8IY21 1712 aaKnown RBP10.35□□□□□ -0.75
SH3D19-204ENST00000427414 SMARCA5O60264 1052 aaPredicted RBP10.35□□□□□ -0.75
SH3D19-204ENST00000427414 PDE8AO60658 829 aa10.35□□□□□ -0.75
SH3D19-204ENST00000427414 RPS6KA4O75676 772 aa10.35□□□□□ -0.75
SH3D19-204ENST00000427414 CAMTA2O94983 1202 aa10.35□□□□□ -0.75
SH3D19-204ENST00000427414 HSCBQ8IWL3 235 aa10.35□□□□□ -0.75
SH3D19-204ENST00000427414 SYTL4Q96C24 671 aaPredicted RBP10.35□□□□□ -0.75
SH3D19-204ENST00000427414 EVI5LQ96CN4 794 aa10.35□□□□□ -0.75
SH3D19-204ENST00000427414 AKAP2Q9Y2D5 859 aa10.35□□□□□ -0.75
SH3D19-204ENST00000427414 ATP5JP18859 108 aa10.34□□□□□ -0.75
SH3D19-204ENST00000427414 EPHA10Q5JZY3 1008 aa10.34□□□□□ -0.75
SH3D19-204ENST00000427414 RUFY2Q8WXA3 655 aa10.34□□□□□ -0.75
SH3D19-204ENST00000427414 ZBTB3Q9H5J0 574 aa10.34□□□□□ -0.75
SH3D19-204ENST00000427414 EYA2O00167 538 aa10.34□□□□□ -0.75
SH3D19-204ENST00000427414 IGSF3O75054 1194 aa10.34□□□□□ -0.75
SH3D19-204ENST00000427414 ITPK1Q13572 414 aa10.34□□□□□ -0.75
SH3D19-204ENST00000427414 ZNF512BQ96KM6 892 aaPredicted RBP10.34□□□□□ -0.75
SH3D19-204ENST00000427414 ISY1Q9ULR0 285 aaKnown RBP10.34□□□□□ -0.75
SH3D19-204ENST00000427414 ATP5J2-PTCD1G3V325 749 aa10.33□□□□□ -0.76
SH3D19-204ENST00000427414 LMBR1LQ6UX01 489 aa10.33□□□□□ -0.76
SH3D19-204ENST00000427414 SLC10A5Q5PT55 438 aa10.33□□□□□ -0.76
SH3D19-204ENST00000427414 USP26Q9BXU7 913 aa10.33□□□□□ -0.76
SH3D19-204ENST00000427414 QTRT2Q9H974 415 aaKnown RBP10.33□□□□□ -0.76
SH3D19-204ENST00000427414 BRWD3Q6RI45 1802 aa10.33□□□□□ -0.76
SH3D19-204ENST00000427414 ZNF609O15014 1411 aa10.32□□□□□ -0.76
SH3D19-204ENST00000427414 SH3TC1Q8TE82 1336 aa10.32□□□□□ -0.76
SH3D19-204ENST00000427414 CHMLP26374 656 aa10.32□□□□□ -0.76
SH3D19-204ENST00000427414 RBM6P78332 1123 aaKnown RBP10.32□□□□□ -0.76
SH3D19-204ENST00000427414 CCDC57Q2TAC2 916 aa10.32□□□□□ -0.76
SH3D19-204ENST00000427414 TNNI3KQ59H18 835 aa10.32□□□□□ -0.76
SH3D19-204ENST00000427414 SEPT12Q8IYM1 358 aa10.32□□□□□ -0.76
SH3D19-204ENST00000427414 OTUD7AQ8TE49 926 aaPredicted RBP10.32□□□□□ -0.76
SH3D19-204ENST00000427414 UTP14AQ9BVJ6 771 aaKnown RBP10.32□□□□□ -0.76
SH3D19-204ENST00000427414 NYXQ9GZU5 481 aa10.32□□□□□ -0.76
SH3D19-204ENST00000427414 NARFQ9UHQ1 456 aa10.32□□□□□ -0.76
SH3D19-204ENST00000427414 FPGT-TNNI3KV9GXZ4 949 aa10.32□□□□□ -0.76
SH3D19-204ENST00000427414 CTSWP56202 376 aa10.32□□□□□ -0.76
SH3D19-204ENST00000427414 ESYT1Q9BSJ8 1104 aa10.32□□□□□ -0.76
SH3D19-204ENST00000427414 C4AP0C0L4 1744 aa10.32□□□□□ -0.76
SH3D19-204ENST00000427414 MCCP23508 829 aa10.31□□□□□ -0.76
SH3D19-204ENST00000427414 RABEP1Q15276 862 aa10.31□□□□□ -0.76
SH3D19-204ENST00000427414 LRRFIP1Q32MZ4 808 aaKnown RBP10.31□□□□□ -0.76
SH3D19-204ENST00000427414 ATG9AQ7Z3C6 839 aa10.31□□□□□ -0.76
SH3D19-204ENST00000427414 ACSBG1Q96GR2 724 aa10.31□□□□□ -0.76
SH3D19-204ENST00000427414 IFIT5Q13325 482 aaKnown RBP10.31□□□□□ -0.76
SH3D19-204ENST00000427414 HLFQ16534 295 aa10.31□□□□□ -0.76
SH3D19-204ENST00000427414 AACSQ86V21 672 aa10.31□□□□□ -0.76
SH3D19-204ENST00000427414 MROH5Q6ZUA9 1318 aa10.31□□□□□ -0.76
SH3D19-204ENST00000427414 ANKRD18BA2A2Z9 1011 aa10.3□□□□□ -0.76
SH3D19-204ENST00000427414 PIP4K2AP48426 406 aaPredicted RBP10.3□□□□□ -0.76
SH3D19-204ENST00000427414 TMED8Q6PL24 325 aaPredicted RBP10.3□□□□□ -0.76
SH3D19-204ENST00000427414 GAS2L3Q86XJ1 694 aa10.3□□□□□ -0.76
SH3D19-204ENST00000427414 LINC00116Q8NCU8 138 aa10.3□□□□□ -0.76
SH3D19-204ENST00000427414 TTLL11Q8NHH1 800 aa10.3□□□□□ -0.76
SH3D19-204ENST00000427414 EAF2Q96CJ1 260 aaPredicted RBP10.3□□□□□ -0.76
SH3D19-204ENST00000427414 QSER1Q2KHR3 1735 aa10.3□□□□□ -0.76
SH3D19-204ENST00000427414 UBR3Q6ZT12 1888 aa10.3□□□□□ -0.76
SH3D19-204ENST00000427414 IRS4O14654 1257 aaPredicted RBP10.3□□□□□ -0.76
SH3D19-204ENST00000427414 TPM2P07951 284 aa10.3□□□□□ -0.76
SH3D19-204ENST00000427414 MCM2P49736 904 aa10.3□□□□□ -0.76
SH3D19-204ENST00000427414 IL1RAPL2Q9NP60 686 aa10.3□□□□□ -0.76
SH3D19-204ENST00000427414 KCNQ2O43526 872 aa10.3□□□□□ -0.76
SH3D19-204ENST00000427414 SF3B3Q15393 1217 aaKnown RBP10.3□□□□□ -0.76
SH3D19-204ENST00000427414 TNPO1Q92973 898 aaKnown RBP10.3□□□□□ -0.76
SH3D19-204ENST00000427414 HAUS7Q99871 368 aa10.3□□□□□ -0.76
SH3D19-204ENST00000427414 CEP126Q9P2H0 1117 aa10.3□□□□□ -0.76
SH3D19-204ENST00000427414 TRMT112Q9UI30 125 aaKnown RBP10.3□□□□□ -0.76
SH3D19-204ENST00000427414 PA2G4Q9UQ80 394 aaKnown RBP10.3□□□□□ -0.76
SH3D19-204ENST00000427414 UBN2Q6ZU65 1347 aa10.29□□□□□ -0.76
SH3D19-204ENST00000427414 CASZ1Q86V15 1759 aa10.29□□□□□ -0.76
SH3D19-204ENST00000427414 KAT6BQ8WYB5 2073 aa10.29□□□□□ -0.76
SH3D19-204ENST00000427414 NTSR2O95665 410 aa10.29□□□□□ -0.76
SH3D19-204ENST00000427414 KRT27Q7Z3Y8 459 aa10.29□□□□□ -0.76
SH3D19-204ENST00000427414 KCNB2Q92953 911 aa10.29□□□□□ -0.76
SH3D19-204ENST00000427414 GBP4Q96PP9 640 aa10.29□□□□□ -0.76
SH3D19-204ENST00000427414 PLSCR1O15162 318 aa10.29□□□□□ -0.76
SH3D19-204ENST00000427414 SGSM2O43147 1006 aa10.29□□□□□ -0.76
SH3D19-204ENST00000427414 CCDC152Q4G0S7 254 aa10.29□□□□□ -0.76
SH3D19-204ENST00000427414 NUTM1Q86Y26 1132 aa10.29□□□□□ -0.76
SH3D19-204ENST00000427414 CCNL1Q9UK58 526 aaPredicted RBP10.29□□□□□ -0.76
SH3D19-204ENST00000427414 RTCBQ9Y3I0 505 aaKnown RBP10.29□□□□□ -0.76
SH3D19-204ENST00000427414 RIPOR2Q9Y4F9 1068 aa10.29□□□□□ -0.76
SH3D19-204ENST00000427414 A0A1B0GUL6 1792 aa10.28□□□□□ -0.76
SH3D19-204ENST00000427414 APBB1O00213 710 aa10.28□□□□□ -0.76
SH3D19-204ENST00000427414 SKOR2Q2VWA4 1001 aaPredicted RBP10.28□□□□□ -0.76
SH3D19-204ENST00000427414 CDC5LQ99459 802 aaKnown RBP10.28□□□□□ -0.76
SH3D19-204ENST00000427414 PDCL3Q9H2J4 239 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms