RNA–Protein interactions for RNA: ENST00000427167.5

SEMA3C-204, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-204ENST00000427167 JARID2Q92833 1246 aaPredicted RBP29.2■■■□□ 2.26
SEMA3C-204ENST00000427167 COL4A5P29400 1685 aa29.2■■■□□ 2.26
SEMA3C-204ENST00000427167 FZD9O00144 591 aa29.19■■■□□ 2.26
SEMA3C-204ENST00000427167 SF3B3Q15393 1217 aaKnown RBP29.19■■■□□ 2.26
SEMA3C-204ENST00000427167 SP8Q8IXZ3 490 aa29.19■■■□□ 2.26
SEMA3C-204ENST00000427167 PPIP5K2O43314 1243 aa29.18■■■□□ 2.26
SEMA3C-204ENST00000427167 DPP8Q6V1X1 898 aaPredicted RBP29.18■■■□□ 2.26
SEMA3C-204ENST00000427167 PCCAP05165 728 aaPredicted RBP29.17■■■□□ 2.26
SEMA3C-204ENST00000427167 AOC3Q16853 763 aa29.17■■■□□ 2.26
SEMA3C-204ENST00000427167 MPNDQ8N594 471 aa29.17■■■□□ 2.26
SEMA3C-204ENST00000427167 CELF1Q92879 486 aaKnown RBP29.17■■■□□ 2.26
SEMA3C-204ENST00000427167 MYH16Q9H6N6 1097 aa29.17■■■□□ 2.26
SEMA3C-204ENST00000427167 IQCA1LA6NCM1 817 aa29.16■■■□□ 2.26
SEMA3C-204ENST00000427167 VAMP4O75379 141 aa29.16■■■□□ 2.26
SEMA3C-204ENST00000427167 EIF6P56537 245 aaKnown RBP29.16■■■□□ 2.26
SEMA3C-204ENST00000427167 NEXNQ0ZGT2 675 aa29.16■■■□□ 2.26
SEMA3C-204ENST00000427167 L3MBTL3Q96JM7 780 aaPredicted RBP29.16■■■□□ 2.26
SEMA3C-204ENST00000427167 NIM1KQ8IY84 436 aa29.15■■■□□ 2.26
SEMA3C-204ENST00000427167 SUPT20HQ8NEM7 779 aa29.15■■■□□ 2.26
SEMA3C-204ENST00000427167 GJA3Q9Y6H8 435 aa29.15■■■□□ 2.26
SEMA3C-204ENST00000427167 IGKV5-2P06315 115 aa29.14■■■□□ 2.26
SEMA3C-204ENST00000427167 HSP90B1P14625 803 aaKnown RBP29.14■■■□□ 2.26
SEMA3C-204ENST00000427167 FLIIQ13045 1269 aa29.14■■■□□ 2.26
SEMA3C-204ENST00000427167 TMC4Q7Z404 712 aa29.14■■■□□ 2.26
SEMA3C-204ENST00000427167 COL4A1P02462 1669 aa29.14■■■□□ 2.26
SEMA3C-204ENST00000427167 POTEIP0CG38 1075 aa29.13■■■□□ 2.25
SEMA3C-204ENST00000427167 POTEJP0CG39 1038 aa29.13■■■□□ 2.25
SEMA3C-204ENST00000427167 HTRA3P83110 453 aa29.13■■■□□ 2.25
SEMA3C-204ENST00000427167 FKBP5Q13451 457 aaPredicted RBP29.13■■■□□ 2.25
SEMA3C-204ENST00000427167 CWF19L2Q2TBE0 894 aaKnown RBP29.13■■■□□ 2.25
SEMA3C-204ENST00000427167 GPC2Q8N158 579 aa29.13■■■□□ 2.25
SEMA3C-204ENST00000427167 PDE8AO60658 829 aa29.12■■■□□ 2.25
SEMA3C-204ENST00000427167 CCDC85AQ96PX6 553 aaPredicted RBP29.12■■■□□ 2.25
SEMA3C-204ENST00000427167 RTFDC1Q9BY42 306 aaPredicted RBP29.12■■■□□ 2.25
SEMA3C-204ENST00000427167 HACL1Q9UJ83 578 aa29.12■■■□□ 2.25
SEMA3C-204ENST00000427167 SCN4AP35499 1836 aa29.12■■■□□ 2.25
SEMA3C-204ENST00000427167 TAF1DQ9H5J8 278 aaPredicted RBP29.11■■■□□ 2.25
SEMA3C-204ENST00000427167 SEC31BQ9NQW1 1179 aa29.11■■■□□ 2.25
SEMA3C-204ENST00000427167 LRRC37AA6NMS7 1700 aa29.11■■■□□ 2.25
SEMA3C-204ENST00000427167 CCDC152Q4G0S7 254 aa29.1■■■□□ 2.25
SEMA3C-204ENST00000427167 EAPPQ56P03 285 aaPredicted RBP29.1■■■□□ 2.25
SEMA3C-204ENST00000427167 VPS33BQ9H267 617 aa29.1■■■□□ 2.25
SEMA3C-204ENST00000427167 NEURL1BA8MQ27 555 aa29.09■■■□□ 2.25
SEMA3C-204ENST00000427167 RPS8P62241 208 aaKnown RBP29.08■■■□□ 2.25
SEMA3C-204ENST00000427167 CHADLQ6NUI6 762 aa29.08■■■□□ 2.25
SEMA3C-204ENST00000427167 NSFL1CQ9UNZ2 370 aaKnown RBP29.08■■■□□ 2.25
SEMA3C-204ENST00000427167 DUOX1Q9NRD9 1551 aa29.08■■■□□ 2.25
SEMA3C-204ENST00000427167 CACNA1FO60840 1977 aa29.07■■■□□ 2.24
SEMA3C-204ENST00000427167 EPHX2P34913 555 aa29.07■■■□□ 2.24
SEMA3C-204ENST00000427167 KIAA2012Q0VF49 1180 aa29.07■■■□□ 2.24
SEMA3C-204ENST00000427167 DNAAF4Q8WXU2 420 aa29.07■■■□□ 2.24
SEMA3C-204ENST00000427167 ZNF521Q96K83 1311 aa29.07■■■□□ 2.24
SEMA3C-204ENST00000427167 CDHR2Q9BYE9 1310 aa29.07■■■□□ 2.24
SEMA3C-204ENST00000427167 CTSWP56202 376 aa29.05■■■□□ 2.24
SEMA3C-204ENST00000427167 GPSM2P81274 684 aa29.05■■■□□ 2.24
SEMA3C-204ENST00000427167 UBE3BQ7Z3V4 1068 aa29.05■■■□□ 2.24
SEMA3C-204ENST00000427167 LDHDQ86WU2 507 aa29.05■■■□□ 2.24
SEMA3C-204ENST00000427167 ZNRF3Q9ULT6 936 aa29.05■■■□□ 2.24
SEMA3C-204ENST00000427167 LMOD1P29536 600 aaPredicted RBP29.04■■■□□ 2.24
SEMA3C-204ENST00000427167 CLEC11AQ9Y240 323 aa29.04■■■□□ 2.24
SEMA3C-204ENST00000427167 C6orf229H3BNL8 230 aa29.03■■■□□ 2.24
SEMA3C-204ENST00000427167 GCKRQ14397 625 aa29.02■■■□□ 2.24
SEMA3C-204ENST00000427167 DNAJC5GQ8N7S2 189 aa29.02■■■□□ 2.24
SEMA3C-204ENST00000427167 F6X3S4 739 aa29.01■■■□□ 2.23
SEMA3C-204ENST00000427167 RIMBP2O15034 1052 aa29.01■■■□□ 2.23
SEMA3C-204ENST00000427167 SCNN1DP51172 638 aa29.01■■■□□ 2.23
SEMA3C-204ENST00000427167 CXCL9Q07325 125 aa29.01■■■□□ 2.23
SEMA3C-204ENST00000427167 WASHC4Q2M389 1173 aa29.01■■■□□ 2.23
SEMA3C-204ENST00000427167 PNMA8AQ86V59 439 aaPredicted RBP29.01■■■□□ 2.23
SEMA3C-204ENST00000427167 LINS1Q8NG48 757 aa29.01■■■□□ 2.23
SEMA3C-204ENST00000427167 POLLQ9UGP5 575 aa29.01■■■□□ 2.23
SEMA3C-204ENST00000427167 LTBP1Q14766 1721 aa29■■■□□ 2.23
SEMA3C-204ENST00000427167 H7C1W4 665 aa29■■■□□ 2.23
SEMA3C-204ENST00000427167 RAD17O75943 681 aa29■■■□□ 2.23
SEMA3C-204ENST00000427167 ANKRD18AQ8IVF6 992 aa29■■■□□ 2.23
SEMA3C-204ENST00000427167 GPR101Q96P66 508 aaPredicted RBP29■■■□□ 2.23
SEMA3C-204ENST00000427167 ANKIB1Q9P2G1 1089 aa29■■■□□ 2.23
SEMA3C-204ENST00000427167 MYH3P11055 1940 aa29■■■□□ 2.23
SEMA3C-204ENST00000427167 EPS15P42566 896 aa28.99■■■□□ 2.23
SEMA3C-204ENST00000427167 TTLL11Q8NHH1 800 aa28.99■■■□□ 2.23
SEMA3C-204ENST00000427167 CCER2I3L3R5 266 aa28.98■■■□□ 2.23
SEMA3C-204ENST00000427167 CIAPIN1Q6FI81 312 aa28.98■■■□□ 2.23
SEMA3C-204ENST00000427167 TBC1D16Q8TBP0 767 aa28.98■■■□□ 2.23
SEMA3C-204ENST00000427167 CDC5LQ99459 802 aaKnown RBP28.98■■■□□ 2.23
SEMA3C-204ENST00000427167 GREM2Q9H772 168 aa28.98■■■□□ 2.23
SEMA3C-204ENST00000427167 EYA3Q99504 573 aa28.97■■■□□ 2.23
SEMA3C-204ENST00000427167 DBNDD1Q9H9R9 158 aa28.97■■■□□ 2.23
SEMA3C-204ENST00000427167 ADAMTSL1Q8N6G6 1762 aa28.96■■■□□ 2.23
SEMA3C-204ENST00000427167 YDJCA8MPS7 323 aa28.96■■■□□ 2.23
SEMA3C-204ENST00000427167 E9PSI1 815 aa28.96■■■□□ 2.23
SEMA3C-204ENST00000427167 UFL1O94874 794 aa28.96■■■□□ 2.23
SEMA3C-204ENST00000427167 KLRG1Q96E93 195 aa28.96■■■□□ 2.23
SEMA3C-204ENST00000427167 GMPSP49915 693 aaPredicted RBP28.95■■■□□ 2.22
SEMA3C-204ENST00000427167 TNIP1Q15025 636 aa28.95■■■□□ 2.22
SEMA3C-204ENST00000427167 PODXL2Q9NZ53 605 aa28.95■■■□□ 2.22
SEMA3C-204ENST00000427167 SPEF2Q9C093 1822 aa28.94■■■□□ 2.22
SEMA3C-204ENST00000427167 DOK7Q18PE1 504 aa28.94■■■□□ 2.22
SEMA3C-204ENST00000427167 MAP1SQ66K74 1059 aaPredicted RBP28.94■■■□□ 2.22
SEMA3C-204ENST00000427167 BCL2L13Q9BXK5 485 aa28.94■■■□□ 2.22
SEMA3C-204ENST00000427167 GPRC5DQ9NZD1 345 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms