RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 COL11A2P13942 1736 aaPredicted RBP13.64□□□□□ -0.23
SYNC-204ENST00000426909 G2E3Q7L622 706 aa13.64□□□□□ -0.23
SYNC-204ENST00000426909 NLRP10Q86W26 655 aa13.64□□□□□ -0.23
SYNC-204ENST00000426909 ANP32EQ9BTT0 268 aa13.64□□□□□ -0.23
SYNC-204ENST00000426909 ABCC12Q96J65 1359 aa13.63□□□□□ -0.23
SYNC-204ENST00000426909 GNAI2P04899 355 aa13.63□□□□□ -0.23
SYNC-204ENST00000426909 CEP85Q6P2H3 762 aa13.63□□□□□ -0.23
SYNC-204ENST00000426909 C1orf115Q9H7X2 142 aa13.63□□□□□ -0.23
SYNC-204ENST00000426909 TRMT112Q9UI30 125 aaKnown RBP13.63□□□□□ -0.23
SYNC-204ENST00000426909 ARFGEF2Q9Y6D5 1785 aa13.63□□□□□ -0.23
SYNC-204ENST00000426909 ALDH1B1P30837 517 aa13.62□□□□□ -0.23
SYNC-204ENST00000426909 BMP2KLQ5H9B9 411 aa13.62□□□□□ -0.23
SYNC-204ENST00000426909 ANKRD45Q5TZF3 282 aa13.62□□□□□ -0.23
SYNC-204ENST00000426909 PRPF40BQ6NWY9 871 aaKnown RBP13.62□□□□□ -0.23
SYNC-204ENST00000426909 SLC4A10Q6U841 1118 aa13.62□□□□□ -0.23
SYNC-204ENST00000426909 RPGRQ92834 1020 aaKnown RBP13.62□□□□□ -0.23
SYNC-204ENST00000426909 NLRP3Q96P20 1036 aa13.62□□□□□ -0.23
SYNC-204ENST00000426909 ISCA1Q9BUE6 129 aa13.62□□□□□ -0.23
SYNC-204ENST00000426909 SH3TC1Q8TE82 1336 aa13.62□□□□□ -0.23
SYNC-204ENST00000426909 TNRC6CQ9HCJ0 1690 aaKnown RBP13.61□□□□□ -0.23
SYNC-204ENST00000426909 ATP5J2-PTCD1G3V325 749 aa13.61□□□□□ -0.23
SYNC-204ENST00000426909 TRIM28Q13263 835 aaKnown RBP13.61□□□□□ -0.23
SYNC-204ENST00000426909 CRY2Q49AN0 593 aa13.61□□□□□ -0.23
SYNC-204ENST00000426909 SLC10A5Q5PT55 438 aa13.61□□□□□ -0.23
SYNC-204ENST00000426909 SOGA3Q5TF21 947 aa13.61□□□□□ -0.23
SYNC-204ENST00000426909 KSR2Q6VAB6 950 aa13.61□□□□□ -0.23
SYNC-204ENST00000426909 MEIS3Q99687 375 aa13.61□□□□□ -0.23
SYNC-204ENST00000426909 LNPKQ9C0E8 428 aa13.61□□□□□ -0.23
SYNC-204ENST00000426909 PI4KAP2A4QPH2 592 aa13.6□□□□□ -0.23
SYNC-204ENST00000426909 F6X3S4 739 aa13.6□□□□□ -0.23
SYNC-204ENST00000426909 NEXNQ0ZGT2 675 aa13.6□□□□□ -0.23
SYNC-204ENST00000426909 PI4KAP1Q8N8J0 262 aa13.6□□□□□ -0.23
SYNC-204ENST00000426909 MYD88Q99836 296 aa13.6□□□□□ -0.23
SYNC-204ENST00000426909 METTL22Q9BUU2 404 aaPredicted RBP13.6□□□□□ -0.23
SYNC-204ENST00000426909 HDAC5Q9UQL6 1122 aa13.6□□□□□ -0.23
SYNC-204ENST00000426909 MAP3K2Q9Y2U5 619 aa13.6□□□□□ -0.23
SYNC-204ENST00000426909 C21orf2O43822 256 aa13.59□□□□□ -0.23
SYNC-204ENST00000426909 HSP90B1P14625 803 aaKnown RBP13.59□□□□□ -0.23
SYNC-204ENST00000426909 ZNF784Q8NCA9 323 aaPredicted RBP13.59□□□□□ -0.23
SYNC-204ENST00000426909 CCDC191Q8NCU4 936 aa13.59□□□□□ -0.23
SYNC-204ENST00000426909 RBM17Q96I25 401 aaKnown RBP13.59□□□□□ -0.23
SYNC-204ENST00000426909 ZNF219Q9P2Y4 722 aaPredicted RBP13.59□□□□□ -0.23
SYNC-204ENST00000426909 HOXA10P31260 410 aaPredicted RBP13.58□□□□□ -0.24
SYNC-204ENST00000426909 SRCIN1Q9C0H9 1055 aa13.58□□□□□ -0.24
SYNC-204ENST00000426909 CWC25Q9NXE8 425 aaPredicted RBP13.58□□□□□ -0.24
SYNC-204ENST00000426909 DAXXQ9UER7 740 aaPredicted RBP13.58□□□□□ -0.24
SYNC-204ENST00000426909 ADCY9O60503 1353 aa13.58□□□□□ -0.24
SYNC-204ENST00000426909 ALDH1L1O75891 902 aa13.57□□□□□ -0.24
SYNC-204ENST00000426909 HCLS1P14317 486 aaPredicted RBP13.57□□□□□ -0.24
SYNC-204ENST00000426909 CCDC93Q567U6 631 aa13.57□□□□□ -0.24
SYNC-204ENST00000426909 C9orf131Q5VYM1 1079 aa13.57□□□□□ -0.24
SYNC-204ENST00000426909 ZBTB38Q8NAP3 1195 aaPredicted RBP13.57□□□□□ -0.24
SYNC-204ENST00000426909 DNAAF4Q8WXU2 420 aa13.57□□□□□ -0.24
SYNC-204ENST00000426909 FAM89AQ96GI7 184 aa13.57□□□□□ -0.24
SYNC-204ENST00000426909 CRAMP1Q96RY5 1269 aa13.57□□□□□ -0.24
SYNC-204ENST00000426909 UBTFL1P0CB47 393 aaPredicted RBP13.56□□□□□ -0.24
SYNC-204ENST00000426909 LMNB1P20700 586 aa13.56□□□□□ -0.24
SYNC-204ENST00000426909 ATP8B2P98198 1209 aa13.56□□□□□ -0.24
SYNC-204ENST00000426909 RASSF7Q02833 373 aa13.56□□□□□ -0.24
SYNC-204ENST00000426909 C3orf67Q6ZVT6 689 aa13.56□□□□□ -0.24
SYNC-204ENST00000426909 TBC1D32Q96NH3 1257 aa13.56□□□□□ -0.24
SYNC-204ENST00000426909 TMX4Q9H1E5 349 aaPredicted RBP13.56□□□□□ -0.24
SYNC-204ENST00000426909 TAOK3Q9H2K8 898 aa13.56□□□□□ -0.24
SYNC-204ENST00000426909 RNF181Q9P0P0 153 aa13.56□□□□□ -0.24
SYNC-204ENST00000426909 SLX4Q8IY92 1834 aa13.55□□□□□ -0.24
SYNC-204ENST00000426909 CACNA1SQ13698 1873 aa13.55□□□□□ -0.24
SYNC-204ENST00000426909 NFKBIEO00221 500 aa13.55□□□□□ -0.24
SYNC-204ENST00000426909 IRS4O14654 1257 aaPredicted RBP13.55□□□□□ -0.24
SYNC-204ENST00000426909 PCCAP05165 728 aaPredicted RBP13.55□□□□□ -0.24
SYNC-204ENST00000426909 GRIPAP1Q4V328 841 aa13.55□□□□□ -0.24
SYNC-204ENST00000426909 RTL5Q5HYW3 569 aaPredicted RBP13.55□□□□□ -0.24
SYNC-204ENST00000426909 CC2D2BQ6DHV5 1058 aa13.55□□□□□ -0.24
SYNC-204ENST00000426909 DDX46Q7L014 1031 aaKnown RBP13.55□□□□□ -0.24
SYNC-204ENST00000426909 RTKN2Q8IZC4 609 aa13.55□□□□□ -0.24
SYNC-204ENST00000426909 SYNE4Q8N205 404 aa13.55□□□□□ -0.24
SYNC-204ENST00000426909 C7orf43Q8WVR3 580 aa13.55□□□□□ -0.24
SYNC-204ENST00000426909 USP44Q9H0E7 712 aa13.55□□□□□ -0.24
SYNC-204ENST00000426909 LTBP3Q9NS15 1303 aa13.55□□□□□ -0.24
SYNC-204ENST00000426909 ZC3H4Q9UPT8 1303 aaKnown RBP13.55□□□□□ -0.24
SYNC-204ENST00000426909 PPEF1O14829 653 aaPredicted RBP13.54□□□□□ -0.24
SYNC-204ENST00000426909 BECN1Q14457 450 aa13.54□□□□□ -0.24
SYNC-204ENST00000426909 BEND3Q5T5X7 828 aa13.54□□□□□ -0.24
SYNC-204ENST00000426909 DDX60Q8IY21 1712 aaKnown RBP13.53□□□□□ -0.24
SYNC-204ENST00000426909 LAMB2P55268 1798 aa13.53□□□□□ -0.24
SYNC-204ENST00000426909 NEURL1BA8MQ27 555 aa13.53□□□□□ -0.24
SYNC-204ENST00000426909 SEC24BO95487 1268 aa13.53□□□□□ -0.24
SYNC-204ENST00000426909 IGKV5-2P06315 115 aa13.53□□□□□ -0.24
SYNC-204ENST00000426909 CWF19L2Q2TBE0 894 aaKnown RBP13.53□□□□□ -0.24
SYNC-204ENST00000426909 PLEKHM2Q8IWE5 1019 aa13.53□□□□□ -0.24
SYNC-204ENST00000426909 LINS1Q8NG48 757 aa13.53□□□□□ -0.24
SYNC-204ENST00000426909 GPBP1L1Q9HC44 474 aaPredicted RBP13.53□□□□□ -0.24
SYNC-204ENST00000426909 BBOX1O75936 387 aa13.52□□□□□ -0.25
SYNC-204ENST00000426909 FKBP4Q02790 459 aaKnown RBP eCLIP13.52□□□□□ -0.25
SYNC-204ENST00000426909 SF3B3Q15393 1217 aaKnown RBP13.52□□□□□ -0.25
SYNC-204ENST00000426909 TMC4Q7Z404 712 aa13.52□□□□□ -0.25
SYNC-204ENST00000426909 OSBPL3Q9H4L5 887 aa13.52□□□□□ -0.25
SYNC-204ENST00000426909 CDHR2Q9BYE9 1310 aa13.52□□□□□ -0.25
SYNC-204ENST00000426909 FER1L6Q2WGJ9 1857 aa13.52□□□□□ -0.25
SYNC-204ENST00000426909 PDE8AO60658 829 aa13.51□□□□□ -0.25
SYNC-204ENST00000426909 RAB11FIP3O75154 756 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms