RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ZNF277Q9NRM2 450 aaPredicted RBP17.44■□□□□ 0.38
SNX3-204ENST00000426155 DUOX1Q9NRD9 1551 aa17.42■□□□□ 0.38
SNX3-204ENST00000426155 NEURL1BA8MQ27 555 aa17.42■□□□□ 0.38
SNX3-204ENST00000426155 F6X3S4 739 aa17.42■□□□□ 0.38
SNX3-204ENST00000426155 KIF3CO14782 793 aa17.42■□□□□ 0.38
SNX3-204ENST00000426155 PCCAP05165 728 aaPredicted RBP17.42■□□□□ 0.38
SNX3-204ENST00000426155 DSG3P32926 999 aa17.42■□□□□ 0.38
SNX3-204ENST00000426155 DDX46Q7L014 1031 aaKnown RBP17.42■□□□□ 0.38
SNX3-204ENST00000426155 LTBP1Q14766 1721 aa17.41■□□□□ 0.38
SNX3-204ENST00000426155 NEXNQ0ZGT2 675 aa17.41■□□□□ 0.38
SNX3-204ENST00000426155 RTKN2Q8IZC4 609 aa17.41■□□□□ 0.38
SNX3-204ENST00000426155 DNAAF4Q8WXU2 420 aa17.41■□□□□ 0.38
SNX3-204ENST00000426155 CELF1Q92879 486 aaKnown RBP17.41■□□□□ 0.38
SNX3-204ENST00000426155 CCDC85AQ96PX6 553 aaPredicted RBP17.41■□□□□ 0.38
SNX3-204ENST00000426155 ZC3H4Q9UPT8 1303 aaKnown RBP17.41■□□□□ 0.38
SNX3-204ENST00000426155 GRAPQ13588 217 aa17.4■□□□□ 0.38
SNX3-204ENST00000426155 SF3B3Q15393 1217 aaKnown RBP17.4■□□□□ 0.38
SNX3-204ENST00000426155 GRAPLQ8TC17 118 aaPredicted RBP17.4■□□□□ 0.38
SNX3-204ENST00000426155 BCL2L13Q9BXK5 485 aa17.4■□□□□ 0.38
SNX3-204ENST00000426155 WDR90Q96KV7 1748 aa17.4■□□□□ 0.38
SNX3-204ENST00000426155 C1QTNF8P60827 252 aa17.39■□□□□ 0.37
SNX3-204ENST00000426155 TRMT2AQ8IZ69 625 aaKnown RBP17.39■□□□□ 0.37
SNX3-204ENST00000426155 SEC31BQ9NQW1 1179 aa17.39■□□□□ 0.37
SNX3-204ENST00000426155 ATP6V0A2Q9Y487 856 aa17.39■□□□□ 0.37
SNX3-204ENST00000426155 IARSP41252 1262 aaKnown RBP17.38■□□□□ 0.37
SNX3-204ENST00000426155 UBE3BQ7Z3V4 1068 aa17.38■□□□□ 0.37
SNX3-204ENST00000426155 MRPL50Q8N5N7 158 aaKnown RBP17.38■□□□□ 0.37
SNX3-204ENST00000426155 SSH1Q8WYL5 1049 aa17.38■□□□□ 0.37
SNX3-204ENST00000426155 PSMD1Q99460 953 aa17.38■□□□□ 0.37
SNX3-204ENST00000426155 KDM2BQ8NHM5 1336 aa17.38■□□□□ 0.37
SNX3-204ENST00000426155 CDHR2Q9BYE9 1310 aa17.38■□□□□ 0.37
SNX3-204ENST00000426155 ZNF541Q9H0D2 1346 aa17.38■□□□□ 0.37
SNX3-204ENST00000426155 GLTPD2A6NH11 291 aa17.37■□□□□ 0.37
SNX3-204ENST00000426155 PDE8AO60658 829 aa17.37■□□□□ 0.37
SNX3-204ENST00000426155 GCKRQ14397 625 aa17.37■□□□□ 0.37
SNX3-204ENST00000426155 CC2D2BQ6DHV5 1058 aa17.37■□□□□ 0.37
SNX3-204ENST00000426155 LINS1Q8NG48 757 aa17.37■□□□□ 0.37
SNX3-204ENST00000426155 RRAGCQ9HB90 399 aa17.37■□□□□ 0.37
SNX3-204ENST00000426155 BBOX1O75936 387 aa17.36■□□□□ 0.37
SNX3-204ENST00000426155 HNRNPUQ00839 825 aaKnown RBP eCLIP17.36■□□□□ 0.37
SNX3-204ENST00000426155 BEND3Q5T5X7 828 aa17.36■□□□□ 0.37
SNX3-204ENST00000426155 H7C1W4 665 aa17.35■□□□□ 0.37
SNX3-204ENST00000426155 DDNO94850 711 aaPredicted RBP17.35■□□□□ 0.37
SNX3-204ENST00000426155 CASP7P55210 303 aa17.35■□□□□ 0.37
SNX3-204ENST00000426155 CTSWP56202 376 aa17.35■□□□□ 0.37
SNX3-204ENST00000426155 SLC4A10Q6U841 1118 aa17.35■□□□□ 0.37
SNX3-204ENST00000426155 SP8Q8IXZ3 490 aa17.35■□□□□ 0.37
SNX3-204ENST00000426155 A0A1B0GUL6 1792 aa17.35■□□□□ 0.37
SNX3-204ENST00000426155 AOC3Q16853 763 aa17.34■□□□□ 0.37
SNX3-204ENST00000426155 CCDC152Q4G0S7 254 aa17.34■□□□□ 0.37
SNX3-204ENST00000426155 DPP8Q6V1X1 898 aaPredicted RBP17.34■□□□□ 0.37
SNX3-204ENST00000426155 POTECB2RU33 542 aa17.33■□□□□ 0.36
SNX3-204ENST00000426155 MPNDQ8N594 471 aa17.33■□□□□ 0.36
SNX3-204ENST00000426155 TTLL11Q8NHH1 800 aa17.33■□□□□ 0.36
SNX3-204ENST00000426155 TMX4Q9H1E5 349 aaPredicted RBP17.33■□□□□ 0.36
SNX3-204ENST00000426155 GREM2Q9H772 168 aa17.33■□□□□ 0.36
SNX3-204ENST00000426155 SCN4AP35499 1836 aa17.33■□□□□ 0.36
SNX3-204ENST00000426155 PPIP5K2O43314 1243 aa17.32■□□□□ 0.36
SNX3-204ENST00000426155 HSP90B1P14625 803 aaKnown RBP17.32■□□□□ 0.36
SNX3-204ENST00000426155 LARGE2Q8N3Y3 721 aa17.32■□□□□ 0.36
SNX3-204ENST00000426155 SMC4Q9NTJ3 1288 aa17.32■□□□□ 0.36
SNX3-204ENST00000426155 FZD9O00144 591 aa17.31■□□□□ 0.36
SNX3-204ENST00000426155 RPS8P62241 208 aaKnown RBP17.31■□□□□ 0.36
SNX3-204ENST00000426155 GPSM2P81274 684 aa17.31■□□□□ 0.36
SNX3-204ENST00000426155 GRIPAP1Q4V328 841 aa17.31■□□□□ 0.36
SNX3-204ENST00000426155 DPY19L2Q6NUT2 758 aa17.31■□□□□ 0.36
SNX3-204ENST00000426155 GPR101Q96P66 508 aaPredicted RBP17.31■□□□□ 0.36
SNX3-204ENST00000426155 RTFDC1Q9BY42 306 aaPredicted RBP17.31■□□□□ 0.36
SNX3-204ENST00000426155 FAM161AQ3B820 660 aa17.3■□□□□ 0.36
SNX3-204ENST00000426155 TMC4Q7Z404 712 aa17.3■□□□□ 0.36
SNX3-204ENST00000426155 JDP2Q8WYK2 163 aa17.3■□□□□ 0.36
SNX3-204ENST00000426155 NSFL1CQ9UNZ2 370 aaKnown RBP17.3■□□□□ 0.36
SNX3-204ENST00000426155 PTPRCP08575 1304 aa17.29■□□□□ 0.36
SNX3-204ENST00000426155 TOMM70O94826 608 aa17.29■□□□□ 0.36
SNX3-204ENST00000426155 ALDH1L2Q3SY69 923 aa17.29■□□□□ 0.36
SNX3-204ENST00000426155 SRCIN1Q9C0H9 1055 aa17.29■□□□□ 0.36
SNX3-204ENST00000426155 POLLQ9UGP5 575 aa17.29■□□□□ 0.36
SNX3-204ENST00000426155 RTL9Q8NET4 1388 aa17.28■□□□□ 0.36
SNX3-204ENST00000426155 SCN9AQ15858 1988 aa17.28■□□□□ 0.36
SNX3-204ENST00000426155 GRM8O00222 908 aa17.28■□□□□ 0.36
SNX3-204ENST00000426155 VEGFAP15692 232 aaPredicted RBP17.28■□□□□ 0.36
SNX3-204ENST00000426155 EPHA10Q5JZY3 1008 aa17.28■□□□□ 0.36
SNX3-204ENST00000426155 ANKRD18AQ8IVF6 992 aa17.28■□□□□ 0.36
SNX3-204ENST00000426155 NIM1KQ8IY84 436 aa17.28■□□□□ 0.36
SNX3-204ENST00000426155 C16orf71Q8IYS4 520 aaPredicted RBP17.28■□□□□ 0.36
SNX3-204ENST00000426155 SUPT20HQ8NEM7 779 aa17.28■□□□□ 0.36
SNX3-204ENST00000426155 PLA2G12BQ9BX93 195 aa17.28■□□□□ 0.36
SNX3-204ENST00000426155 ALDH1L1O75891 902 aa17.27■□□□□ 0.36
SNX3-204ENST00000426155 POTEIP0CG38 1075 aa17.27■□□□□ 0.36
SNX3-204ENST00000426155 POTEJP0CG39 1038 aa17.27■□□□□ 0.36
SNX3-204ENST00000426155 FOXO4P98177 505 aa17.27■□□□□ 0.36
SNX3-204ENST00000426155 KIAA2012Q0VF49 1180 aa17.27■□□□□ 0.36
SNX3-204ENST00000426155 GJA3Q9Y6H8 435 aa17.27■□□□□ 0.36
SNX3-204ENST00000426155 ADAMTSL1Q8N6G6 1762 aa17.27■□□□□ 0.35
SNX3-204ENST00000426155 WTIPA6NIX2 430 aaPredicted RBP17.26■□□□□ 0.35
SNX3-204ENST00000426155 C6orf229H3BNL8 230 aa17.26■□□□□ 0.35
SNX3-204ENST00000426155 RIMBP2O15034 1052 aa17.26■□□□□ 0.35
SNX3-204ENST00000426155 ITGA6P23229 1130 aa17.26■□□□□ 0.35
SNX3-204ENST00000426155 TBC1D16Q8TBP0 767 aa17.26■□□□□ 0.35
SNX3-204ENST00000426155 L3MBTL3Q96JM7 780 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms