RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 ESYT1Q9BSJ8 1104 aa17.58■□□□□ 0.41
CDK3-201ENST00000425876 RPS6KA4O75676 772 aa17.57■□□□□ 0.4
CDK3-201ENST00000425876 HSP90B1P14625 803 aaKnown RBP17.57■□□□□ 0.4
CDK3-201ENST00000425876 CTSWP56202 376 aa17.57■□□□□ 0.4
CDK3-201ENST00000425876 TTLL11Q8NHH1 800 aa17.57■□□□□ 0.4
CDK3-201ENST00000425876 CCDC8Q9H0W5 538 aaPredicted RBP17.57■□□□□ 0.4
CDK3-201ENST00000425876 LY75O60449 1722 aa17.57■□□□□ 0.4
CDK3-201ENST00000425876 BCORQ6W2J9 1755 aa17.57■□□□□ 0.4
CDK3-201ENST00000425876 TRIM37O94972 964 aa17.57■□□□□ 0.4
CDK3-201ENST00000425876 IFIT5Q13325 482 aaKnown RBP17.57■□□□□ 0.4
CDK3-201ENST00000425876 UTP14AQ9BVJ6 771 aaKnown RBP17.57■□□□□ 0.4
CDK3-201ENST00000425876 CCNL1Q9UK58 526 aaPredicted RBP17.57■□□□□ 0.4
CDK3-201ENST00000425876 SH3TC1Q8TE82 1336 aa17.57■□□□□ 0.4
CDK3-201ENST00000425876 CCDC125Q86Z20 511 aa17.56■□□□□ 0.4
CDK3-201ENST00000425876 EVI5LQ96CN4 794 aa17.56■□□□□ 0.4
CDK3-201ENST00000425876 ATP5JP18859 108 aa17.55■□□□□ 0.4
CDK3-201ENST00000425876 SUSD4Q5VX71 490 aa17.55■□□□□ 0.4
CDK3-201ENST00000425876 SYNE4Q8N205 404 aa17.55■□□□□ 0.4
CDK3-201ENST00000425876 KIF2CQ99661 725 aa17.55■□□□□ 0.4
CDK3-201ENST00000425876 TLR7Q9NYK1 1049 aaKnown RBP17.55■□□□□ 0.4
CDK3-201ENST00000425876 DBNLQ9UJU6 430 aaKnown RBP17.55■□□□□ 0.4
CDK3-201ENST00000425876 MYH3P11055 1940 aa17.54■□□□□ 0.4
CDK3-201ENST00000425876 AK9Q5TCS8 1911 aa17.54■□□□□ 0.4
CDK3-201ENST00000425876 SNX21Q969T3 373 aa17.54■□□□□ 0.4
CDK3-201ENST00000425876 NIP7Q9Y221 180 aaKnown RBP eCLIP17.54■□□□□ 0.4
CDK3-201ENST00000425876 LRRC24Q50LG9 513 aa17.53■□□□□ 0.4
CDK3-201ENST00000425876 DEFB132Q7Z7B7 95 aa17.53■□□□□ 0.4
CDK3-201ENST00000425876 ZNF594Q96JF6 807 aaPredicted RBP17.53■□□□□ 0.4
CDK3-201ENST00000425876 CEP126Q9P2H0 1117 aa17.53■□□□□ 0.4
CDK3-201ENST00000425876 ANKRD18BA2A2Z9 1011 aa17.53■□□□□ 0.4
CDK3-201ENST00000425876 HIP1O00291 1037 aa17.53■□□□□ 0.4
CDK3-201ENST00000425876 NTSR2O95665 410 aa17.53■□□□□ 0.4
CDK3-201ENST00000425876 ITGA6P23229 1130 aa17.53■□□□□ 0.4
CDK3-201ENST00000425876 TAF7LQ5H9L4 462 aa17.53■□□□□ 0.4
CDK3-201ENST00000425876 TBC1D2Q9BYX2 928 aa17.53■□□□□ 0.4
CDK3-201ENST00000425876 NARFQ9UHQ1 456 aa17.53■□□□□ 0.4
CDK3-201ENST00000425876 ZNF609O15014 1411 aa17.52■□□□□ 0.4
CDK3-201ENST00000425876 SCN7AQ01118 1682 aa17.52■□□□□ 0.4
CDK3-201ENST00000425876 MAP4K4O95819 1239 aaPredicted RBP17.52■□□□□ 0.39
CDK3-201ENST00000425876 KCNQ4P56696 695 aa17.52■□□□□ 0.39
CDK3-201ENST00000425876 SF3B2Q13435 895 aaKnown RBP17.52■□□□□ 0.39
CDK3-201ENST00000425876 TICAM2Q86XR7 235 aa17.52■□□□□ 0.39
CDK3-201ENST00000425876 PUS3Q9BZE2 481 aaKnown RBP17.52■□□□□ 0.39
CDK3-201ENST00000425876 GREM2Q9H772 168 aa17.52■□□□□ 0.39
CDK3-201ENST00000425876 AKAP2Q9Y2D5 859 aa17.52■□□□□ 0.39
CDK3-201ENST00000425876 RTCBQ9Y3I0 505 aaKnown RBP17.52■□□□□ 0.39
CDK3-201ENST00000425876 RTL9Q8NET4 1388 aa17.51■□□□□ 0.39
CDK3-201ENST00000425876 SGSM2O43147 1006 aa17.51■□□□□ 0.39
CDK3-201ENST00000425876 HMGB2P26583 209 aaKnown RBP17.51■□□□□ 0.39
CDK3-201ENST00000425876 SLC4A3P48751 1232 aa17.51■□□□□ 0.39
CDK3-201ENST00000425876 RUFY2Q8WXA3 655 aa17.51■□□□□ 0.39
CDK3-201ENST00000425876 DBNDD2Q9BQY9 259 aa17.51■□□□□ 0.39
CDK3-201ENST00000425876 RIPOR2Q9Y4F9 1068 aa17.51■□□□□ 0.39
CDK3-201ENST00000425876 TAF1LQ8IZX4 1826 aa17.51■□□□□ 0.39
CDK3-201ENST00000425876 GNPATO15228 680 aa17.5■□□□□ 0.39
CDK3-201ENST00000425876 RABEP1Q15276 862 aa17.5■□□□□ 0.39
CDK3-201ENST00000425876 BOLA2Q9H3K6 86 aa17.5■□□□□ 0.39
CDK3-201ENST00000425876 RFX7Q2KHR2 1363 aa17.5■□□□□ 0.39
CDK3-201ENST00000425876 SLC27A3Q5K4L6 730 aa17.49■□□□□ 0.39
CDK3-201ENST00000425876 IL17RAQ96F46 866 aa17.49■□□□□ 0.39
CDK3-201ENST00000425876 HAUS7Q99871 368 aa17.49■□□□□ 0.39
CDK3-201ENST00000425876 DIAPH3Q9NSV4 1193 aa17.49■□□□□ 0.39
CDK3-201ENST00000425876 LAMB2P55268 1798 aa17.49■□□□□ 0.39
CDK3-201ENST00000425876 A0A1B0GUL7 405 aa17.49■□□□□ 0.39
CDK3-201ENST00000425876 MCCP23508 829 aa17.49■□□□□ 0.39
CDK3-201ENST00000425876 ANAPC15P60006 121 aa17.49■□□□□ 0.39
CDK3-201ENST00000425876 LDHAL6AQ6ZMR3 332 aa17.49■□□□□ 0.39
CDK3-201ENST00000425876 HSCBQ8IWL3 235 aa17.49■□□□□ 0.39
CDK3-201ENST00000425876 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.49■□□□□ 0.39
CDK3-201ENST00000425876 CCDC85AQ96PX6 553 aaPredicted RBP17.49■□□□□ 0.39
CDK3-201ENST00000425876 BCL2L12Q9HB09 334 aa17.49■□□□□ 0.39
CDK3-201ENST00000425876 C4BP0C0L5 1744 aa17.48■□□□□ 0.39
CDK3-201ENST00000425876 LRP5O75197 1615 aa17.48■□□□□ 0.39
CDK3-201ENST00000425876 ZPR1O75312 459 aa17.48■□□□□ 0.39
CDK3-201ENST00000425876 HCLS1P14317 486 aaPredicted RBP17.48■□□□□ 0.39
CDK3-201ENST00000425876 ADRA2BP18089 450 aa17.48■□□□□ 0.39
CDK3-201ENST00000425876 BAG6P46379 1132 aa17.48■□□□□ 0.39
CDK3-201ENST00000425876 TIMM10P62072 90 aa17.48■□□□□ 0.39
CDK3-201ENST00000425876 EN1Q05925 392 aaPredicted RBP17.48■□□□□ 0.39
CDK3-201ENST00000425876 CCDC152Q4G0S7 254 aa17.48■□□□□ 0.39
CDK3-201ENST00000425876 IL27Q8NEV9 243 aa17.48■□□□□ 0.39
CDK3-201ENST00000425876 ANO2Q9NQ90 1003 aa17.48■□□□□ 0.39
CDK3-201ENST00000425876 RAD50Q92878 1312 aa17.47■□□□□ 0.39
CDK3-201ENST00000425876 RIC1Q4ADV7 1423 aa17.47■□□□□ 0.39
CDK3-201ENST00000425876 APBA3O96018 575 aa17.47■□□□□ 0.39
CDK3-201ENST00000425876 NEUROD6Q96NK8 337 aa17.47■□□□□ 0.39
CDK3-201ENST00000425876 SNRKQ9NRH2 765 aa17.47■□□□□ 0.39
CDK3-201ENST00000425876 DDX60Q8IY21 1712 aaKnown RBP17.47■□□□□ 0.39
CDK3-201ENST00000425876 RGPD3A6NKT7 1758 aaPredicted RBP17.46■□□□□ 0.39
CDK3-201ENST00000425876 RGPD4Q7Z3J3 1758 aa17.46■□□□□ 0.39
CDK3-201ENST00000425876 SLC10A5Q5PT55 438 aa17.46■□□□□ 0.39
CDK3-201ENST00000425876 USPL1Q5W0Q7 1092 aa17.46■□□□□ 0.39
CDK3-201ENST00000425876 ARHGEF1Q92888 912 aaKnown RBP17.46■□□□□ 0.39
CDK3-201ENST00000425876 NYXQ9GZU5 481 aa17.46■□□□□ 0.39
CDK3-201ENST00000425876 CNNM1Q9NRU3 951 aa17.46■□□□□ 0.39
CDK3-201ENST00000425876 ABCC12Q96J65 1359 aa17.46■□□□□ 0.39
CDK3-201ENST00000425876 METTL24Q5JXM2 366 aa17.45■□□□□ 0.38
CDK3-201ENST00000425876 CWC27Q6UX04 472 aaKnown RBP17.45■□□□□ 0.38
CDK3-201ENST00000425876 VGLL2Q8N8G2 317 aa17.45■□□□□ 0.38
CDK3-201ENST00000425876 IL25Q9H293 177 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms