RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 TIAM2Q8IVF5 1701 aa23.52■■□□□ 1.36
SMARCAL1-205ENST00000425815 COL4A5P29400 1685 aa23.51■■□□□ 1.35
SMARCAL1-205ENST00000425815 CWF19L2Q2TBE0 894 aaKnown RBP23.51■■□□□ 1.35
SMARCAL1-205ENST00000425815 DICER1Q9UPY3 1922 aaKnown RBP23.49■■□□□ 1.35
SMARCAL1-205ENST00000425815 NEURL1BA8MQ27 555 aa23.49■■□□□ 1.35
SMARCAL1-205ENST00000425815 L3MBTL3Q96JM7 780 aaPredicted RBP23.49■■□□□ 1.35
SMARCAL1-205ENST00000425815 SEC31BQ9NQW1 1179 aa23.49■■□□□ 1.35
SMARCAL1-205ENST00000425815 DDX60Q8IY21 1712 aaKnown RBP23.49■■□□□ 1.35
SMARCAL1-205ENST00000425815 LAMB2P55268 1798 aa23.49■■□□□ 1.35
SMARCAL1-205ENST00000425815 COL4A1P02462 1669 aa23.48■■□□□ 1.35
SMARCAL1-205ENST00000425815 PDE8AO60658 829 aa23.48■■□□□ 1.35
SMARCAL1-205ENST00000425815 FSTL1Q12841 308 aa23.48■■□□□ 1.35
SMARCAL1-205ENST00000425815 MPNDQ8N594 471 aa23.48■■□□□ 1.35
SMARCAL1-205ENST00000425815 WDR90Q96KV7 1748 aa23.47■■□□□ 1.35
SMARCAL1-205ENST00000425815 CEP350Q5VT06 3117 aa23.47■■□□□ 1.35
SMARCAL1-205ENST00000425815 H7C1W4 665 aa23.47■■□□□ 1.35
SMARCAL1-205ENST00000425815 FKBP5Q13451 457 aaPredicted RBP23.47■■□□□ 1.35
SMARCAL1-205ENST00000425815 DPP8Q6V1X1 898 aaPredicted RBP23.47■■□□□ 1.35
SMARCAL1-205ENST00000425815 TMC4Q7Z404 712 aa23.47■■□□□ 1.35
SMARCAL1-205ENST00000425815 LARGE2Q8N3Y3 721 aa23.47■■□□□ 1.35
SMARCAL1-205ENST00000425815 DNAAF4Q8WXU2 420 aa23.47■■□□□ 1.35
SMARCAL1-205ENST00000425815 JDP2Q8WYK2 163 aa23.47■■□□□ 1.35
SMARCAL1-205ENST00000425815 TMX4Q9H1E5 349 aaPredicted RBP23.47■■□□□ 1.35
SMARCAL1-205ENST00000425815 CDHR2Q9BYE9 1310 aa23.47■■□□□ 1.35
SMARCAL1-205ENST00000425815 RPS8P62241 208 aaKnown RBP23.46■■□□□ 1.35
SMARCAL1-205ENST00000425815 NEXNQ0ZGT2 675 aa23.46■■□□□ 1.35
SMARCAL1-205ENST00000425815 AOC3Q16853 763 aa23.46■■□□□ 1.35
SMARCAL1-205ENST00000425815 VPS33BQ9H267 617 aa23.46■■□□□ 1.35
SMARCAL1-205ENST00000425815 SLFN5Q08AF3 891 aa23.45■■□□□ 1.34
SMARCAL1-205ENST00000425815 CCDC85AQ96PX6 553 aaPredicted RBP23.45■■□□□ 1.34
SMARCAL1-205ENST00000425815 PPIP5K2O43314 1243 aa23.44■■□□□ 1.34
SMARCAL1-205ENST00000425815 POTEIP0CG38 1075 aa23.44■■□□□ 1.34
SMARCAL1-205ENST00000425815 POTEJP0CG39 1038 aa23.44■■□□□ 1.34
SMARCAL1-205ENST00000425815 HSP90B1P14625 803 aaKnown RBP23.44■■□□□ 1.34
SMARCAL1-205ENST00000425815 CASP7P55210 303 aa23.44■■□□□ 1.34
SMARCAL1-205ENST00000425815 GCKRQ14397 625 aa23.44■■□□□ 1.34
SMARCAL1-205ENST00000425815 SMC1BQ8NDV3 1235 aa23.44■■□□□ 1.34
SMARCAL1-205ENST00000425815 SUPT20HQ8NEM7 779 aa23.44■■□□□ 1.34
SMARCAL1-205ENST00000425815 CDCA7LQ96GN5 454 aa23.44■■□□□ 1.34
SMARCAL1-205ENST00000425815 E9PSI1 815 aa23.43■■□□□ 1.34
SMARCAL1-205ENST00000425815 F6X3S4 739 aa23.43■■□□□ 1.34
SMARCAL1-205ENST00000425815 GPSM2P81274 684 aa23.43■■□□□ 1.34
SMARCAL1-205ENST00000425815 CCDC152Q4G0S7 254 aa23.43■■□□□ 1.34
SMARCAL1-205ENST00000425815 GPC2Q8N158 579 aa23.43■■□□□ 1.34
SMARCAL1-205ENST00000425815 TAF1DQ9H5J8 278 aaPredicted RBP23.43■■□□□ 1.34
SMARCAL1-205ENST00000425815 KIAA2012Q0VF49 1180 aa23.42■■□□□ 1.34
SMARCAL1-205ENST00000425815 LINS1Q8NG48 757 aa23.42■■□□□ 1.34
SMARCAL1-205ENST00000425815 TTLL11Q8NHH1 800 aa23.42■■□□□ 1.34
SMARCAL1-205ENST00000425815 POLLQ9UGP5 575 aa23.42■■□□□ 1.34
SMARCAL1-205ENST00000425815 TAF1P21675 1872 aa23.42■■□□□ 1.34
SMARCAL1-205ENST00000425815 CTSWP56202 376 aa23.41■■□□□ 1.34
SMARCAL1-205ENST00000425815 EIF6P56537 245 aaKnown RBP23.41■■□□□ 1.34
SMARCAL1-205ENST00000425815 BEND3Q5T5X7 828 aa23.41■■□□□ 1.34
SMARCAL1-205ENST00000425815 NIM1KQ8IY84 436 aa23.41■■□□□ 1.34
SMARCAL1-205ENST00000425815 TRMT2AQ8IZ69 625 aaKnown RBP23.41■■□□□ 1.34
SMARCAL1-205ENST00000425815 NSFL1CQ9UNZ2 370 aaKnown RBP23.41■■□□□ 1.34
SMARCAL1-205ENST00000425815 IQCA1LA6NCM1 817 aa23.4■■□□□ 1.34
SMARCAL1-205ENST00000425815 APLP1P51693 650 aa23.4■■□□□ 1.34
SMARCAL1-205ENST00000425815 UBE3BQ7Z3V4 1068 aa23.4■■□□□ 1.34
SMARCAL1-205ENST00000425815 CXCL9Q07325 125 aa23.39■■□□□ 1.33
SMARCAL1-205ENST00000425815 MIER1Q8N108 512 aa23.39■■□□□ 1.33
SMARCAL1-205ENST00000425815 PLA2G12BQ9BX93 195 aa23.39■■□□□ 1.33
SMARCAL1-205ENST00000425815 ZNRF3Q9ULT6 936 aa23.39■■□□□ 1.33
SMARCAL1-205ENST00000425815 GJA3Q9Y6H8 435 aa23.39■■□□□ 1.33
SMARCAL1-205ENST00000425815 DUOX1Q9NRD9 1551 aa23.39■■□□□ 1.33
SMARCAL1-205ENST00000425815 HTRA3P83110 453 aa23.38■■□□□ 1.33
SMARCAL1-205ENST00000425815 MRPL50Q8N5N7 158 aaKnown RBP23.38■■□□□ 1.33
SMARCAL1-205ENST00000425815 DNAJC5GQ8N7S2 189 aa23.38■■□□□ 1.33
SMARCAL1-205ENST00000425815 GREM2Q9H772 168 aa23.38■■□□□ 1.33
SMARCAL1-205ENST00000425815 HACL1Q9UJ83 578 aa23.38■■□□□ 1.33
SMARCAL1-205ENST00000425815 YDJCA8MPS7 323 aa23.37■■□□□ 1.33
SMARCAL1-205ENST00000425815 TBC1D16Q8TBP0 767 aa23.37■■□□□ 1.33
SMARCAL1-205ENST00000425815 PODXL2Q9NZ53 605 aa23.37■■□□□ 1.33
SMARCAL1-205ENST00000425815 CSF1RP07333 972 aa23.36■■□□□ 1.33
SMARCAL1-205ENST00000425815 EPHX2P34913 555 aa23.36■■□□□ 1.33
SMARCAL1-205ENST00000425815 SCNN1DP51172 638 aa23.36■■□□□ 1.33
SMARCAL1-205ENST00000425815 WASHC4Q2M389 1173 aa23.36■■□□□ 1.33
SMARCAL1-205ENST00000425815 DIEXFQ68CQ4 756 aaKnown RBP23.36■■□□□ 1.33
SMARCAL1-205ENST00000425815 CHADLQ6NUI6 762 aa23.36■■□□□ 1.33
SMARCAL1-205ENST00000425815 GPR101Q96P66 508 aaPredicted RBP23.36■■□□□ 1.33
SMARCAL1-205ENST00000425815 ANKRD18AQ8IVF6 992 aa23.35■■□□□ 1.33
SMARCAL1-205ENST00000425815 LRRC37AA6NMS7 1700 aa23.35■■□□□ 1.33
SMARCAL1-205ENST00000425815 C6orf229H3BNL8 230 aa23.34■■□□□ 1.33
SMARCAL1-205ENST00000425815 RIMBP2O15034 1052 aa23.34■■□□□ 1.33
SMARCAL1-205ENST00000425815 EPS15P42566 896 aa23.34■■□□□ 1.33
SMARCAL1-205ENST00000425815 SSH1Q8WYL5 1049 aa23.34■■□□□ 1.33
SMARCAL1-205ENST00000425815 RTL9Q8NET4 1388 aa23.34■■□□□ 1.33
SMARCAL1-205ENST00000425815 WTIPA6NIX2 430 aaPredicted RBP23.33■■□□□ 1.33
SMARCAL1-205ENST00000425815 RAD17O75943 681 aa23.33■■□□□ 1.33
SMARCAL1-205ENST00000425815 LDHDQ86WU2 507 aa23.33■■□□□ 1.33
SMARCAL1-205ENST00000425815 FOXO4P98177 505 aa23.32■■□□□ 1.32
SMARCAL1-205ENST00000425815 EAPPQ56P03 285 aaPredicted RBP23.32■■□□□ 1.32
SMARCAL1-205ENST00000425815 CDC5LQ99459 802 aaKnown RBP23.32■■□□□ 1.32
SMARCAL1-205ENST00000425815 BSDC1Q9NW68 430 aaPredicted RBP23.32■■□□□ 1.32
SMARCAL1-205ENST00000425815 CIAPIN1Q6FI81 312 aa23.31■■□□□ 1.32
SMARCAL1-205ENST00000425815 DBNDD1Q9H9R9 158 aa23.31■■□□□ 1.32
SMARCAL1-205ENST00000425815 KCNQ5Q9NR82 932 aa23.31■■□□□ 1.32
SMARCAL1-205ENST00000425815 ANKIB1Q9P2G1 1089 aa23.31■■□□□ 1.32
SMARCAL1-205ENST00000425815 MINPP1Q9UNW1 487 aa23.31■■□□□ 1.32
SMARCAL1-205ENST00000425815 ITGBL1O95965 494 aaPredicted RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms